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Treating Vision, Not Signs: A Post-hoc Analysis Evaluating BCVA as an Early Indicator in Treat-and-Extend Management of DME. 治疗视力,而不是体征:评价BCVA作为DME治疗和扩展管理早期指标的事后分析。
Pub Date : 2026-02-03 DOI: 10.1101/2025.07.13.25331469
Aly Hamza Khowaja, Kholood Janjua, Haider Ali, Rubbia Afridi, Zoha Zahid Fazal, Mohammad Abdul Saqhlain Shaik, Mohamed Ibrahim Ahmed, Muhammad Sohail Halim, Theodore Leng, Carolyn K Pan, Quan Dong Nguyen, Yasir Jamal Sepah

Purpose: To determine whether significant changes in best-corrected visual acuity (BCVA) precede or coincide with increases in central retinal thickness (CRT) in diabetic macular edema (DME) during a treat-and-extend (T&E) regimen following initial edema resolution.

Methods: This post-hoc analysis included 60 eyes (60 participants) from the READ-3 clinical trial that achieved CRT <250 µm and were followed until edema recurrence. Following a six-month ranibizumab loading phase, patients were monitored through 24 months with as-needed retreatment. Significant changes were defined as ≥4 Early Treatment Diabetic Retinopathy Study (ETDRS) letters and ≥30 µm on time-domain optical coherence tomography (TD-OCT). The temporal relationship between functional (BCVA) and anatomical (CRT) changes was analyzed.

Results: Median time to edema resolution was 10 months (IQR: 6-16) and to recurrence was 3 months (IQR: 2-3). 52 eyes (86.7%) had functional worsening and 43 (71.7%) had anatomical worsening. In 39 eyes exhibiting both types of deterioration, changes were concurrent in 24 (61.5%). Vision loss preceded anatomical recurrence (BCVA-led) in 23.1% of eyes, with a lead time of 1-4 months. Conversely, anatomical thickening preceded vision loss (OCT-led) in 15.4% of eyes, by a maximum of 2 months.

Conclusions: BCVA fluctuations frequently mirror CRT changes and can precede structural relapse, suggesting that BCVA is a sensitive indicator of DME activity. In resource-limited settings, BCVA may allow for earlier detection of recurrence than OCT alone.

Translational relevance: Functional vision loss can precede structural edema recurrence, supporting the potential for home-based BCVA monitoring as a validated bridge for timely clinical intervention in DME.

目的:确定糖尿病黄斑水肿(DME)患者在初始水肿消退后的治疗延长(T&E)方案中,最佳矫正视力(BCVA)的显著变化是否先于或与中央视网膜厚度(CRT)的增加同时发生。方法:这项事后分析包括来自READ-3临床试验的60只眼睛(60名参与者),达到CRT结果:水肿消退的中位时间为10个月(IQR: 6-16),复发的中位时间为3个月(IQR: 2-3)。功能恶化52眼(86.7%),解剖恶化43眼(71.7%)。在39只同时表现两种恶化的眼睛中,24只(61.5%)同时发生变化。23.1%的眼睛视力丧失先于解剖性复发(bcva导致),提前期为1-4个月。相反,在15.4%的眼睛中,解剖增厚先于视力丧失(oct引导),最多2个月。结论:BCVA波动频繁反映CRT变化,可预示结构性复发,提示BCVA是DME活性的敏感指标。在资源有限的情况下,BCVA可能比单纯OCT更早发现复发。翻译相关性:功能性视力丧失可先于结构性水肿复发,支持家庭BCVA监测作为及时临床干预DME的有效桥梁的潜力。
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引用次数: 0
Viral shedding and symptom severity across populations during acute COVID in the ACTIV-2 study. ACTIV-2研究中急性COVID期间人群中的病毒脱落和症状严重程度
Pub Date : 2026-02-03 DOI: 10.64898/2026.01.31.26345293
Evelyn Kung, Rinki Deo, Manish C Choudhary, Kara W Chew, Teresa H Evering, Rachel Bender Ignacio, Prasanna Jagannathan, James P Flynn, James Regan, Carlee Moser, Mark J Giganti, Michael D Hughes, Justin Ritz, Arzhang Cyrus Javan, Alexander L Greninger, Upinder Singh, William Fischer, Eric S Daar, David A Wohl, Joseph J Eron, Judith S Currier, Robert W Coombs, Davey M Smith, Jonathan Z Li

To evaluate the impact of sex on acute SARS-CoV-2 infection, 668 participants from the ACTIV-2/A5401 study were followed over a 28-day period. A primary analysis was performed on the 469 participants who had quantifiable viral loads at baseline. Male and female participants had comparable nasal SARS-CoV-2 RNA levels at study entry and throughout follow-up. However, sex-specific differences in viral shedding emerged when stratified by duration of symptoms. In the first three days from symptom onset, female participants exhibited higher nasal SARS-CoV-2 RNA levels than males, but lower viral RNA levels thereafter. The higher viral RNA levels in females during the earliest phase of acute COVID-19 was seen even after adjusting for age, race and region of enrollment. Female participants also tended to have higher symptom scores across days since symptom onset but no significant correlation was observed between nasal SARS-CoV-2 RNA levels and symptom score regardless of sex. These findings highlight the impact of sex on both viral shedding and symptom dynamics and underscore the importance of considering time since symptom onset when evaluating respiratory virus antiviral therapies in clinical trials.

为了评估性别对急性SARS-CoV-2感染的影响,对来自ACTIV-2/A5401研究的668名参与者进行了为期28天的随访。对469名在基线时具有可量化病毒载量的参与者进行了初步分析。男性和女性参与者在研究开始时和整个随访期间的鼻腔SARS-CoV-2 RNA水平相当。然而,当按症状持续时间分层时,病毒脱落的性别特异性差异出现了。在症状出现后的前三天,女性参与者的鼻腔SARS-CoV-2 RNA水平高于男性,但此后病毒RNA水平较低。即使在调整了年龄、种族和入组地区后,在急性COVID-19的早期阶段,女性体内的病毒RNA水平也较高。女性参与者在症状出现后的几天内也往往有更高的症状评分,但无论性别如何,鼻腔SARS-CoV-2 RNA水平与症状评分之间均未观察到显著相关性。这些发现强调了性别对病毒脱落和症状动态的影响,并强调了在临床试验中评估呼吸道病毒抗病毒治疗时考虑症状出现时间的重要性。
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引用次数: 0
Reclassification and Weighting of Multiple Causes of Death: US Death Certificates 2003-2023. 多重死亡原因的重新分类和加权:2003-2023年美国死亡证明。
Pub Date : 2026-02-03 DOI: 10.64898/2026.01.31.26345264
Michael Levitt, Ben Marten, Gal Oren, John P A Ioannidis

In death certificates Entity Axis reflects reported death causes in their original order, and Record Axis reflects standardized re-classifications processed with expert rules. Additionally, while conventional mortality statistics consider a single underlying cause ignoring multiple contributing conditions, weighting schemes may consider all listed causes. We evaluated the impact of re-classification and weighting schemes across all 56,986,831 US death certificates from 2003-2023. ICD-10 codes were mapped to 14 broad disease categories. We recorded the frequency of changes and concordance in reported underlying cause of death between Entity and Record Axes. We considered weighting schemes for attributing mortality burden with Record Axis data: W1 (50% weight to underlying cause, 50% distributed equally among contributing causes), W2 (equal weighting across all causes) and W2A (equal weighting across all causes at ICD-10 level). Entity and Record Axes agreed on underlying cause category in 84.8% and on specific ICD-10 code in 68.9%. Reclassification from Entity Axis to Record Axis markedly increased COVID-19 (+92%) and Transport (+44%) and markedly decreased deaths from Other External Causes (-54%). Weighting schemes substantially altered death burden attribution: e.g. they reduced COVID-19 (-44-63%) and Falls (-46-66%), and changes tended to be more prominent with W2 and W2A than with W1 weighting. Weighting brought death counts per disease category closer to the Entity Axis. Weighting also restored Respiratory seasonality patterns. Systematic differences between reported and re-classified causes of death and weighting schemes for multiple causes profoundly change some disease burden estimates with major implications for resource allocation and public health priorities.

Significance statement: Standardized re-classification processes using expert rules recast the selected causes of death in many death certificates. Moreover, vital statistics typically isolate a single underlying cause, while for many deaths multiple causes jointly lead to demise. Analysis of ∼57 million deaths in the USA (2003-2023) shows that a large proportion of deaths are re-classified by expert rules to different causes than those filled by original certifiers. Analyses that give weight not only the recorded underlying cause but also the other listed causes lead to markedly different estimates of deaths from several diseases. For example, the footprint of COVID-19 fatalities during the pandemic years decreases by 44-63%. Re-classification and weighting schemes may have profound impact on disease burden estimates and policy decisions.

在死亡证明中,实体轴反映按原始顺序报告的死亡原因,记录轴反映按专家规则处理的标准化重新分类。此外,虽然传统的死亡率统计只考虑一个潜在原因,而忽略了多种因素,但加权方案可能考虑所有列出的原因。我们评估了重新分类和加权方案对2003-2023年间所有56,986,831份美国死亡证明的影响。ICD-10代码被映射到14个广泛的疾病类别。我们记录了实体轴和记录轴之间报告的潜在死亡原因的变化频率和一致性。我们考虑了用记录轴数据归因死亡负担的加权方案:W1(50%的权重归于潜在原因,50%的权重在贡献原因中平均分配),W2(所有原因的相同权重)和W2A(在ICD-10水平上所有原因的相同权重)。实体和记录轴在根本原因类别上达成一致的占84.8%,在具体的ICD-10代码上达成一致的占68.9%。从实体轴到记录轴的重新分类显着增加了COVID-19(+92%)和运输(+44%),并显着降低了其他外部原因导致的死亡(-54%)。加权方案大大改变了死亡负担归因:例如,它们减少了COVID-19(-44-63%)和Falls(-46-66%),并且W2和W2A的变化往往比W1加权更突出。加权使每个疾病类别的死亡人数更接近实体轴。加权也恢复了呼吸的季节性模式。报告的死亡原因和重新分类的死亡原因之间的系统差异以及多原因加权方案深刻地改变了一些疾病负担估计,对资源分配和公共卫生优先事项产生重大影响。意义说明:使用专家规则的标准化重新分类过程在许多死亡证明中重新确定了选定的死亡原因。此外,人口动态统计通常会孤立出单一的根本原因,而对于许多死亡来说,多种原因共同导致死亡。对美国(2003-2023年)约5700万例死亡的分析表明,根据专家规则,很大一部分死亡被重新分类为不同的原因,而不是由原始证明者填写的原因。由于分析不仅重视记录的根本原因,而且重视其他列出的原因,因此对几种疾病造成的死亡的估计有明显不同。例如,在大流行期间,COVID-19死亡人数减少了44-63%。重新分类和加权方案可能对疾病负担估计和政策决定产生深远影响。
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引用次数: 0
Prediction of Mutations and Outcome in Gastrointestinal Stromal Tumors with Deep Learning: A Multicenter, Multinational Study. 用深度学习预测胃肠道间质瘤的突变和预后:一项多中心、多国研究。
Pub Date : 2026-02-03 DOI: 10.64898/2026.02.02.26345350
A Bonetti, V L Le, Z I Carrero, F Wolf, M Gustav, S W Lam, L Vanhersecke, P Sobczuk, F Le Loarer, M Lenarcik, P Rutkowski, J M van Sabben, N Steeghs, H van Boven, I Machado, S Bagué, S Navarro, E Medina-Ceballos, C Agra, F Giner, G Tapia, A Hernández-Gallego, G Civantos Jubera, M Cuatrecasas, S Lopez-Prades, R E Perret, I Soubeyran, E Khalifa, L Blouin, E Wardelmann, A Meurgey, P Collini, A Voloshin, Y Yatabe, H Hirano, A Gronchi, T Nishida, O Bouché, J F Emile, C Ngo, P Hohenberger, C Cotarelo, J Jakob, J V M G Bovee, H Gelderblom, A Szumera-Cieckiewicz, M Jean-Denis, J Bollard, N Lassau, A Lecesne, J Y Blay, A Italiano, A Crombé, J M Coindre, J N Kather

Background: Gastrointestinal stromal tumor (GIST) is the most common gastrointestinal mesenchymal tumor, driven by tyrosine-protein kinase KIT and platelet-derived growth factor receptor A (PDGFRA) mutations. Specific variants, such as KIT exon 11 deletions, carry prognostic and therapeutic implications, whereas wild-type (WT) variants derive limited benefit from tyrosine kinase inhibitors (TKIs). Given the limited reproducibility of established clinicopathological risk models, deep learning (DL) applied to whole-slide images (WSIs) emerged as a promising tool for molecular classification and prognostic assessment.

Patients and methods: We analyzed 8398 GIST cases from 21 centers in 7 countries, including 7238 with molecular data and 2638 with clinical follow-up. DL models were trained on WSIs to predict mutations, treatment sensitivity, and recurrence-free survival (RFS).

Results: DL predicted mutational status in GIST from WSIs, with area under the curve (AUC) of 0.87 for KIT , 0.96 for PDGFRA . High performance was observed for subtypes, including KIT exon 11 delinss 557-558 (0.67) and PDGFRA exon 18 D842V (0.93). For therapeutic categories, performance reached 0.84 for avapritinib sensitivity, 0.81 for imatinib sensitivity. DL models predicted RFS, with hazard-ratios (HR) of 8.44 (95%CI 6.14-11.61) in the overall cohort and 4.74 (95%CI 3.34-6.74) in patients receiving adjuvant therapy. Prognostic performance was comparable to pathology-based scores, with highest discrimination in the overall cohort and in patients without adjuvant therapy (9.44, 95%CI (5.87-15.20)).

Conclusion: DL applied to WSIs enables prediction of molecular alterations, treatment sensitivity, and RFS in GIST, performing comparably to established risk scores across international cohorts, providing a baseline for future multimodal predictors.

Highlights: Deep learning on histology predicts KIT and PDGFRA mutations in a large international cohort of GISTs from multiple centers Whole-slide image models stratify recurrence-free survival comparable to pathology-based risk scores Prognostic value of deep learning is preserved in adjuvant therapy subgroups, supporting treatment duration decisions.

背景:胃肠道间质瘤(GIST)是由酪氨酸蛋白激酶KIT和血小板衍生生长因子受体A (PDGFRA)突变驱动的最常见的胃肠道间质肿瘤。特定变体,如KIT外显子11缺失,具有预后和治疗意义,而野生型(WT)变体从酪氨酸激酶抑制剂(TKIs)中获得的益处有限。鉴于已建立的临床病理风险模型的可重复性有限,将深度学习(DL)应用于全切片图像(wsi)成为分子分类和预后评估的有前途的工具。患者和方法:我们分析了来自7个国家21个中心的8398例GIST病例,其中7238例有分子数据,2638例有临床随访。DL模型在wsi上进行训练,以预测突变、治疗敏感性和无复发生存(RFS)。结果:DL预测wsi中GIST的突变状态,KIT的曲线下面积(AUC)为0.87,PDGFRA为0.96。对KIT外显子11缺失557-558(0.67)和PDGFRA外显子18缺失D842V(0.93)等亚型进行高效检测。对于治疗类别,阿伐替尼敏感性达到0.84,伊马替尼敏感性达到0.81。DL模型预测RFS,整个队列的风险比(HR)为8.44 (95%CI 6.14-11.61),接受辅助治疗的患者的风险比(HR)为4.74 (95%CI 3.34-6.74)。预后表现与基于病理的评分相当,在整个队列和未接受辅助治疗的患者中具有最高的歧视(9.44,95%CI(5.87-15.20))。结论:将DL应用于wsi可以预测GIST的分子改变、治疗敏感性和RFS,与国际队列中已建立的风险评分相当,为未来的多模式预测提供了基线。亮点:在来自多个中心的大型国际gist队列中,组织学上的深度学习预测KIT和PDGFRA突变,全切片图像模型分层无复发生存与基于病理的风险评分相当,深度学习的预后价值在辅助治疗亚组中保持不变,支持治疗持续时间的决定。
{"title":"Prediction of Mutations and Outcome in Gastrointestinal Stromal Tumors with Deep Learning: A Multicenter, Multinational Study.","authors":"A Bonetti, V L Le, Z I Carrero, F Wolf, M Gustav, S W Lam, L Vanhersecke, P Sobczuk, F Le Loarer, M Lenarcik, P Rutkowski, J M van Sabben, N Steeghs, H van Boven, I Machado, S Bagué, S Navarro, E Medina-Ceballos, C Agra, F Giner, G Tapia, A Hernández-Gallego, G Civantos Jubera, M Cuatrecasas, S Lopez-Prades, R E Perret, I Soubeyran, E Khalifa, L Blouin, E Wardelmann, A Meurgey, P Collini, A Voloshin, Y Yatabe, H Hirano, A Gronchi, T Nishida, O Bouché, J F Emile, C Ngo, P Hohenberger, C Cotarelo, J Jakob, J V M G Bovee, H Gelderblom, A Szumera-Cieckiewicz, M Jean-Denis, J Bollard, N Lassau, A Lecesne, J Y Blay, A Italiano, A Crombé, J M Coindre, J N Kather","doi":"10.64898/2026.02.02.26345350","DOIUrl":"https://doi.org/10.64898/2026.02.02.26345350","url":null,"abstract":"<p><strong>Background: </strong>Gastrointestinal stromal tumor (GIST) is the most common gastrointestinal mesenchymal tumor, driven by tyrosine-protein kinase KIT and platelet-derived growth factor receptor A (PDGFRA) mutations. Specific variants, such as KIT exon 11 deletions, carry prognostic and therapeutic implications, whereas wild-type (WT) variants derive limited benefit from tyrosine kinase inhibitors (TKIs). Given the limited reproducibility of established clinicopathological risk models, deep learning (DL) applied to whole-slide images (WSIs) emerged as a promising tool for molecular classification and prognostic assessment.</p><p><strong>Patients and methods: </strong>We analyzed 8398 GIST cases from 21 centers in 7 countries, including 7238 with molecular data and 2638 with clinical follow-up. DL models were trained on WSIs to predict mutations, treatment sensitivity, and recurrence-free survival (RFS).</p><p><strong>Results: </strong>DL predicted mutational status in GIST from WSIs, with area under the curve (AUC) of 0.87 for <i>KIT</i> , 0.96 for <i>PDGFRA</i> . High performance was observed for subtypes, including KIT exon 11 delinss 557-558 (0.67) and <i>PDGFRA</i> exon 18 D842V (0.93). For therapeutic categories, performance reached 0.84 for avapritinib sensitivity, 0.81 for imatinib sensitivity. DL models predicted RFS, with hazard-ratios (HR) of 8.44 (95%CI 6.14-11.61) in the overall cohort and 4.74 (95%CI 3.34-6.74) in patients receiving adjuvant therapy. Prognostic performance was comparable to pathology-based scores, with highest discrimination in the overall cohort and in patients without adjuvant therapy (9.44, 95%CI (5.87-15.20)).</p><p><strong>Conclusion: </strong>DL applied to WSIs enables prediction of molecular alterations, treatment sensitivity, and RFS in GIST, performing comparably to established risk scores across international cohorts, providing a baseline for future multimodal predictors.</p><p><strong>Highlights: </strong><b>Deep learning on histology predicts KIT and PDGFRA mutations in a large international cohort of GISTs from multiple centers</b> <b>Whole-slide image models stratify recurrence-free survival comparable to pathology-based risk scores</b> <b>Prognostic value of deep learning is preserved in adjuvant therapy subgroups, supporting treatment duration decisions</b>.</p>","PeriodicalId":94281,"journal":{"name":"medRxiv : the preprint server for health sciences","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12889797/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146168685","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Metabolome as a Readout for Adverse Social Exposome Influences on Human Health - A Roadmap for Modifiable Factors and Proactive Health. 代谢组作为不良社会暴露对人类健康影响的读数-可改变因素和主动健康的路线图。
Pub Date : 2026-02-03 DOI: 10.64898/2026.02.02.26344798
Nuanyi Liang, Siamak Mahmoudiandehkordi, Margo B Heston, Pallavi Kaushik, W Ryan Powell, Naama Karu, Desarae A Dempsey, Jennifer S Labus, Leyla Schimmel, Colette Blach, Alexandra Kueider-Paisley, Christopher Brydges, Kevin Huynh, Rupasri Mandal, Michelle V Quirke, James B Brewer, Victor W Henderson, Doris S Chen, Russell H Swerdlow, Matthew Taylor, Thomas Wisniewski, Erik D Roberson, Suzanne Craft, Justin B Miller, Tatiana M Foroud, Kelley M Faber, Najaf Amin, David S Wishart, Andrew J Saykin, Barbara B Bendlin, Jared R Brosch, Peter J Meikle, Amy J Kind, Kamil Borkowski, Rima F Kaddurah-Daouk

The exposome factors, such as diet, lifestyle, microbiome, chemical exposures and social exposome, shapes human health beyond genetic influences, but the mechanisms remain only partially understood. Leveraging the Area Deprivation Index (ADI) of Neighborhood Atlas, a validated measure of the US social exposome, we derive molecular insights on how adverse social exposome (ASE) may impact cardiometabolic and brain health. Using complementary metabolomics platforms, we measured blood metabolome as readouts on net influences of exposome factors. Participants from six Alzheimer's disease research centers (n=449) were studied with generalizability confirmed in the UK Biobank using its harmonizable metric for ASE (n=380,943). Our results suggest that participants living in ASE have metabolic features often shown to predispose individuals to higher risks for cardiovascular diseases and cognitive decline, with impaired mitochondrial energetics, amino acid and lipid metabolism. Diet, microbiome and chemical exposures may contribute to these metabolic features. Molecular insights from metabolic signatures for ASE allows us to map potential modifiable risk factors that can impact and sustain health including brain health.

暴露因素,如饮食、生活方式、微生物群、化学品暴露和社会暴露,对人类健康的影响超出了遗传影响,但其机制仍然只是部分了解。利用邻域地图集的区域剥夺指数(ADI),美国社会暴露的有效措施,我们得出了不良社会暴露(ASE)如何影响心脏代谢和大脑健康的分子见解。利用互补代谢组学平台,我们测量了血液代谢组学作为暴露因素净影响的读数。来自6个阿尔茨海默病研究中心的参与者(n=449)被研究,使用英国生物银行的ASE统一度量(n=380,943)证实了其普遍性。我们的研究结果表明,ASE患者的代谢特征往往显示出个体患心血管疾病和认知能力下降的风险较高,线粒体能量、氨基酸和脂质代谢受损。饮食、微生物群和化学物质暴露可能有助于这些代谢特征。从ASE的代谢特征中获得分子洞察力,使我们能够绘制可能影响和维持健康(包括大脑健康)的潜在可修改风险因素。
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引用次数: 0
Neural and psychophysical predictors of treatment response to transcranial direct current stimulation and mindfulness-based meditation for knee osteoarthritis pain. 经颅直流电刺激和正念冥想治疗膝关节骨关节炎疼痛反应的神经和心理物理预测因素。
Pub Date : 2026-02-03 DOI: 10.64898/2026.02.02.26345407
Chiyoung Lee, Juyoung Park, Hongyu Miao, Hyochol Ahn

Aim: We investigated the heterogeneity of treatment effects in transcranial direct current stimulation (tDCS) with mindfulness-based meditation (MBM) and within each individual study group (tDCS alone, MBM alone, and sham) among individuals with symptomatic knee osteoarthritis. We also explored participant characteristics underlying this heterogeneity.

Methods: This secondary analysis drew on a double-blind, randomized, sham-controlled, phase II, parallel-group trial in which 200 participants were assigned to one of four groups: (1) active tDCS + active MBM, (2) active tDCS + sham MBM, (3) sham tDCS + active MBM, or (4) sham tDCS + sham MBM. Participants received ten 20-minute tDCS sessions (active or sham) administered concurrently with MBM (active or sham). Latent class growth analysis was used to identify subgroups with distinct treatment response trajectories (responders vs. non-responders) based on changes in clinical pain (Numeric Rating Scale) from baseline to post-intervention. Generalized linear models were then applied to determine baseline factors associated with participants' response classification, including demographic, clinical, and psychological characteristics; quantitative sensory testing battery; and pain-related cortical hemodynamic activity measured using functional near-infrared spectroscopy (fNIRS) in response to punctate and thermal stimuli.

Results: Responders in the active tDCS + active MBM and active tDCS + sham MBM groups demonstrated greater improvements in clinical pain from baseline to post-intervention than non-responders ( p < 0.001). In the active tDCS + active MBM group, greater cortical activation in the fNIRS channel S06-D06 of the left somatosensory cortex in response to punctate stimuli, identifying as white, and lower conditioned pain modulation (reflecting less efficient endogenous pain modulation), were significantly associated with being responders ( p < 0.05). In the active tDCS + sham MBM group, younger age and lower heat pain tolerance at the knee were significantly associated with being responders ( p < 0.05). No clear response patterns were observed in the remaining groups.

Conclusion: Factors underlying heterogeneity of treatment effects, including somatosensory cortical activation and pain modulatory profiles, may provide preliminary insights to inform the development of personalized neuromodulation (stimulation) protocols.

目的:我们研究了经颅直流电刺激(tDCS)结合正念冥想(MBM)治疗效果的异质性,并在每个单独的研究组(tDCS单独,MBM单独和假)中对有症状的膝骨关节炎患者进行治疗。我们还探讨了这种异质性背后的参与者特征。方法:这一次要分析利用了一项双盲、随机、假对照、II期平行组试验,其中200名参与者被分为四组:(1)活性tDCS +活性MBM,(2)活性tDCS +假MBM,(3)假tDCS +活性MBM,或(4)假tDCS +假MBM。参与者接受10次20分钟的tDCS会话(活动或假),与MBM(活动或假)同时进行。根据临床疼痛(数值评定量表)从基线到干预后的变化,使用潜在类别增长分析来识别具有不同治疗反应轨迹(反应者与无反应者)的亚组。然后应用广义线性模型确定与受试者反应分类相关的基线因素,包括人口统计学、临床和心理特征;定量感官测试电池;使用功能性近红外光谱(fNIRS)测量疼痛相关皮质血流动力学活动对点状和热刺激的反应。结果:从基线到干预后,活动性tDCS +活动性MBM组和活动性tDCS +假性MBM组的应答者比无应答者的临床疼痛改善更大(p < 0.001)。在活跃tDCS +活跃MBM组中,对点状刺激反应的左侧体感觉皮层fNIRS通道S06-D06激活较大,识别为白色,条件疼痛调节较低(反映内源性疼痛调节效率较低),与反应显著相关(p < 0.05)。活动性tDCS +假性MBM组,年龄越小、膝关节热痛耐受性越低与缓解相关(p < 0.05)。其余各组未观察到明显的反应模式。结论:治疗效果异质性的潜在因素,包括体感觉皮质激活和疼痛调节谱,可能为个性化神经调节(刺激)方案的发展提供初步见解。
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引用次数: 0
T cell immunity predicts clinical outcomes on stopping antiretroviral treatment after HIV-specific broadly neutralising antibody therapy. T细胞免疫预测hiv特异性广泛中和抗体治疗后停止抗逆转录病毒治疗的临床结果。
Pub Date : 2026-02-03 DOI: 10.64898/2026.02.02.26345374
Mohammed Altaf, Carla Nel, Timothy Tipoe, Julia Edgar, Panagiota Zacharopoulou, Devinder Srai, Chanice Knight, Ming Lee, Louise-Rae Cherrill, Emanuela Falaschetti, Ane Ogbe, Stephen Fletcher, Hanna Box, Tamara Elliott, Sabine Kinloch, Julie Fox, Amanda Clarke, Sarah Pett, Simon Collins, Maathini Balachandran, Katie Topping, Louise Terry, Kelly Seaton, Georgia Tomaras, Alison Uriel, Chloe Orkin, Kyle Ring, Gary Whitlock, Marta Boffito, Rebecca Sutherland, Ole S Søgaard, Jesper D Gunst, Helen Brown, Nicola Robinson, Gabriella Lindegard, Philip Goulder, Graham Taylor, Marina Caskey, Michel Nussenzweig, Sarah Fidler, John Frater

There is no readily accessible, scalable cure for HIV infection. Trials of HIV-specific broadly neutralising antibodies (bNAbs) demonstrate inhibition of viral replication and reduction of the reservoir of latently-infected cells, potentially offering new strategies for HIV eradication. Animal and human studies suggest bNAbs have multiple activities, including a direct antiviral action and a secondary induction of T cell responses, the 'vaccinal effect'. The RIO trial assessed HIV-specific cell-mediated immunity after dosing with two long-acting bNAbs (10-1074-LS and 3BNC117-LS) in people treated with antiretroviral therapy (ART) since early stage HIV followed by treatment interruption. BNAbs resulted in sustained viral suppression with 75% of participants controlling off ART after 20 weeks. Here we show that HIV-specific T cell immunity was enhanced for at least 36 weeks after bNAbs in aviraemic participants. Gag-specific T cell immune responses predicted virological outcomes. Baseline CD8+ AIM responses predicted longer times to rebound; baseline CD8+ proliferative responses were additionally protective in participants without baseline bNAb resistance mutations. Baseline ELISpot responses were associated with faster rebound. These data highlight the complex interplay between bNAbs and T cells, identify a post-bNAb protective T cell-driven vaccinal effect, and reinforce the role of immune-based interventions as part of HIV cure strategies.

目前还没有容易获得的、可扩展的治疗艾滋病毒感染的方法。艾滋病毒特异性广泛中和抗体(bNAbs)的试验表明抑制病毒复制和减少潜伏感染细胞的储存库,可能为根除艾滋病毒提供新的策略。动物和人类研究表明,bNAbs具有多种活性,包括直接抗病毒作用和二次诱导T细胞反应,即“疫苗效应”。里约热内卢试验评估了自早期HIV开始接受抗逆转录病毒治疗(ART)后中断治疗的患者在服用两种长效bNAbs (10-1074-LS和3BNC117-LS)后的HIV特异性细胞介导免疫。BNAbs导致持续的病毒抑制,75%的参与者在20周后控制了ART。本研究表明,在接受bnab抗体后,hiv特异性T细胞免疫至少在36周内得到增强。gag特异性T细胞免疫反应预测病毒学结果。基线CD8+ AIM反应预测更长的反弹时间;基线CD8+增殖反应在没有基线bNAb耐药突变的参与者中具有额外的保护作用。基线ELISpot反应与更快的反弹相关。这些数据强调了bnab和T细胞之间复杂的相互作用,确定了bnab后保护性T细胞驱动的疫苗效应,并加强了基于免疫的干预措施作为HIV治愈策略的一部分的作用。
{"title":"T cell immunity predicts clinical outcomes on stopping antiretroviral treatment after HIV-specific broadly neutralising antibody therapy.","authors":"Mohammed Altaf, Carla Nel, Timothy Tipoe, Julia Edgar, Panagiota Zacharopoulou, Devinder Srai, Chanice Knight, Ming Lee, Louise-Rae Cherrill, Emanuela Falaschetti, Ane Ogbe, Stephen Fletcher, Hanna Box, Tamara Elliott, Sabine Kinloch, Julie Fox, Amanda Clarke, Sarah Pett, Simon Collins, Maathini Balachandran, Katie Topping, Louise Terry, Kelly Seaton, Georgia Tomaras, Alison Uriel, Chloe Orkin, Kyle Ring, Gary Whitlock, Marta Boffito, Rebecca Sutherland, Ole S Søgaard, Jesper D Gunst, Helen Brown, Nicola Robinson, Gabriella Lindegard, Philip Goulder, Graham Taylor, Marina Caskey, Michel Nussenzweig, Sarah Fidler, John Frater","doi":"10.64898/2026.02.02.26345374","DOIUrl":"https://doi.org/10.64898/2026.02.02.26345374","url":null,"abstract":"<p><p>There is no readily accessible, scalable cure for HIV infection. Trials of HIV-specific broadly neutralising antibodies (bNAbs) demonstrate inhibition of viral replication and reduction of the reservoir of latently-infected cells, potentially offering new strategies for HIV eradication. Animal and human studies suggest bNAbs have multiple activities, including a direct antiviral action and a secondary induction of T cell responses, the 'vaccinal effect'. The RIO trial assessed HIV-specific cell-mediated immunity after dosing with two long-acting bNAbs (10-1074-LS and 3BNC117-LS) in people treated with antiretroviral therapy (ART) since early stage HIV followed by treatment interruption. BNAbs resulted in sustained viral suppression with 75% of participants controlling off ART after 20 weeks. Here we show that HIV-specific T cell immunity was enhanced for at least 36 weeks after bNAbs in aviraemic participants. Gag-specific T cell immune responses predicted virological outcomes. Baseline CD8+ AIM responses predicted longer times to rebound; baseline CD8+ proliferative responses were additionally protective in participants without baseline bNAb resistance mutations. Baseline ELISpot responses were associated with faster rebound. These data highlight the complex interplay between bNAbs and T cells, identify a post-bNAb protective T cell-driven vaccinal effect, and reinforce the role of immune-based interventions as part of HIV cure strategies.</p>","PeriodicalId":94281,"journal":{"name":"medRxiv : the preprint server for health sciences","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12889750/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146168722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analysis of baroreflex activation therapy in patients with heart failure with reduced ejection fraction on current era guideline-directed medical therapy. 心房反射激活治疗对心力衰竭伴射血分数降低患者的临床疗效分析
Pub Date : 2026-02-03 DOI: 10.64898/2026.01.30.26345253
Vu Pham, Arnold Gan, Pratik Doshi, David Valdivia, Melissa Lee Wilson, Michael W Fong

Background: Guideline-directed medical therapy (GDMT) has been shown to improve mortality and/or symptoms in heart failure with reduced ejection fraction (HFrEF). Medical devices also play an important role in improved quality of life and overall symptom relief for HFrEF patients. Baroreflex Activation Therapy (BAT) increases parasympathetic nervous system activity by stimulating the carotid baroreceptors, thereby reducing symptoms. Herein, we analyzed the effects of BAT on hospitalization, atrial arrhythmia (AA), and ventricular arrhythmia (VA) rates.

Methods: A retrospective cohort study was conducted consisting of HFrEF patients treated with BAT at Keck Hospital of USC between 11/2014 and 11/2022. We compared median pre-BAT hospitalization, AA, and VA rates to post-BAT rates at both 6- and 12-months using Wilcoxon Signed Rank tests.

Results: Among 31 patients on BAT, 38.7% met criteria for receiving all four GDMT classes for at least 12 months prior to BAT. Among these, 91.7% had an implantable cardioverter defibrillator (ICD) implanted for ≥12 months pre- and post-BAT. Average pre- vs. post-BAT all-cause hospitalization rates were significantly different only at 12 months [1.3 ± 1.4 vs 0.3 ± 0.9, respectively (p=0.05)]. Borderline significant pre-post comparisons were noted including decreased VA rate at both 6 and 12 months and increased AA rate at 12-months (p=0.06 for all).

Conclusion: In HFrEF patients on full GDMT, BAT was associated with a significant reduction in hospitalization rates at 12 months. There were no significant changes in AA or VA rates.

背景:指南导向药物治疗(GDMT)已被证明可改善伴有射血分数降低(HFrEF)的心力衰竭患者的死亡率和/或症状。医疗设备在改善HFrEF患者的生活质量和整体症状缓解方面也发挥着重要作用。压力反射激活疗法(BAT)通过刺激颈动脉压力感受器来增加副交感神经系统的活性,从而减轻症状。在此,我们分析了BAT对住院、房性心律失常(AA)和室性心律失常(VA)发生率的影响。方法:对2014年11月至2022年11月在USC Keck医院接受BAT治疗的HFrEF患者进行回顾性队列研究。我们使用Wilcoxon sign Rank检验比较bat前住院、AA和VA率与bat后6个月和12个月的中位数。结果:在31例接受BAT治疗的患者中,38.7%的患者在BAT治疗前至少12个月符合接受所有四种GDMT治疗的标准。其中91.7%的患者在bat前后植入了≥12个月的植入式心律转复除颤器(ICD)。bat治疗前后的全因住院率仅在12个月时有显著差异[分别为1.3±1.4 vs 0.3±0.9 (p=0.05)]。注意到临界显著的前后比较,包括6个月和12个月的VA率下降,12个月的AA率增加(所有p=0.06)。结论:在完全GDMT的HFrEF患者中,BAT与12个月住院率显著降低相关。AA率和VA率没有显著变化。
{"title":"Analysis of baroreflex activation therapy in patients with heart failure with reduced ejection fraction on current era guideline-directed medical therapy.","authors":"Vu Pham, Arnold Gan, Pratik Doshi, David Valdivia, Melissa Lee Wilson, Michael W Fong","doi":"10.64898/2026.01.30.26345253","DOIUrl":"https://doi.org/10.64898/2026.01.30.26345253","url":null,"abstract":"<p><strong>Background: </strong>Guideline-directed medical therapy (GDMT) has been shown to improve mortality and/or symptoms in heart failure with reduced ejection fraction (HFrEF). Medical devices also play an important role in improved quality of life and overall symptom relief for HFrEF patients. Baroreflex Activation Therapy (BAT) increases parasympathetic nervous system activity by stimulating the carotid baroreceptors, thereby reducing symptoms. Herein, we analyzed the effects of BAT on hospitalization, atrial arrhythmia (AA), and ventricular arrhythmia (VA) rates.</p><p><strong>Methods: </strong>A retrospective cohort study was conducted consisting of HFrEF patients treated with BAT at Keck Hospital of USC between 11/2014 and 11/2022. We compared median pre-BAT hospitalization, AA, and VA rates to post-BAT rates at both 6- and 12-months using Wilcoxon Signed Rank tests.</p><p><strong>Results: </strong>Among 31 patients on BAT, 38.7% met criteria for receiving all four GDMT classes for at least 12 months prior to BAT. Among these, 91.7% had an implantable cardioverter defibrillator (ICD) implanted for ≥12 months pre- and post-BAT. Average pre- vs. post-BAT all-cause hospitalization rates were significantly different only at 12 months [1.3 ± 1.4 vs 0.3 ± 0.9, respectively (p=0.05)]. Borderline significant pre-post comparisons were noted including decreased VA rate at both 6 and 12 months and increased AA rate at 12-months (p=0.06 for all).</p><p><strong>Conclusion: </strong>In HFrEF patients on full GDMT, BAT was associated with a significant reduction in hospitalization rates at 12 months. There were no significant changes in AA or VA rates.</p>","PeriodicalId":94281,"journal":{"name":"medRxiv : the preprint server for health sciences","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12889790/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146168742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Proteomic Immune Signatures of Severe HIV-Associated Tuberculosis in Sub-Saharan Africa: A Prospective, Multicenter Analysis from Uganda. 撒哈拉以南非洲地区严重hiv相关结核病的蛋白质组免疫特征:来自乌干达的前瞻性多中心分析
Pub Date : 2026-02-03 DOI: 10.64898/2025.12.31.25343299
Jesse E Ross, Alin S Tomoiaga, Nicholas Owor, Xuan Lu, Joseph Shinyale, Tonny Kiyingi, Ignatius Asasira, Peter James Eliku, John Bosco Nsubuga, Christopher Nsereko, Irene Nayiga, Stephen Kyebambe, Thomas Ochar, Moses Kiwubeyi, Rittah Nankwanga, Kai Nie, Hui Xie, Sam Miake-Lye, Bryan Villagomez, Jingjing Qi, Steven J Reynolds, Martina Cathy Nakibuuka, John Kayiwa, Mercy Haumba, Joweria Nakaseegu, Xiaoyu Che, Risa Hoffman, John A Belperio, Julius J Lutwama, Seunghee Kim-Schulze, Max R O'Donnell, Barnabas Bakamutumaho, Matthew J Cummings
<p><strong>Objective: </strong>Severe tuberculosis (TB) is a major cause of critical illness and death in people living with HIV (PLWH) worldwide. Despite this, the immunopathology of severe HIV-associated TB (HIV/TB) is poorly understood. We aimed to identify an immunopathologic signature of severe HIV/TB in sub-Saharan Africa.</p><p><strong>Design and setting: </strong>We analyzed proteomic data from two prospective observational cohorts of adults hospitalized with severe undifferentiated infection in Uganda: an urban discovery cohort (Entebbe, N=241) and a rural validation cohort (Tororo, N=253).</p><p><strong>Patients: </strong>Adults (age ≥18 years) hospitalized with severe febrile illness.</p><p><strong>Interventions: </strong>None.</p><p><strong>Measurements and main results: </strong>Across both cohorts, severe HIV-associated TB was common, affecting 18% of participants in the discovery cohort and 21% in the validation cohort. Overall mortality was significant (30-day mortality of 22% in the discovery cohort & 60-day mortality of 26% in the validation cohort). Participants were stratified into three HIV/TB phenotypes: HIV-negative without TB, PLWH without TB, and PLWH with microbiologically diagnosed TB. We applied ordinal random forest models in the discovery cohort to identify proteins strongly predictive of progressive HIV/TB phenotype. In both cohorts, PLWH with microbiologically diagnosed TB were at highest risk of critical illness and death (30-day mortality of 42% in the discovery cohort & 60-day mortality of 52% in the validation cohort). An eight-protein signature reliably distinguished this phenotype, reflecting mediators of macrophage/dendritic cell activation (LAMP3), NK- and T-cell stimulation and cytotoxicity (CD70, CRTAM), B-cell activation (IGLC2), protease-mediated tissue injury (PRSS2), dysregulated coagulation (SERPINA5), extracellular matrix remodeling (EFEMP1), and GH/IGF axis dysregulation (IGFBP3).</p><p><strong>Conclusions: </strong>We identified an immunologic signature of severe HIV-associated TB defined by mediators of macrophage/dendritic cell and cytotoxic lymphocyte activation, extracellular matrix remodeling, and dysregulated coagulation. These findings offer new insight into HIV/TB pathobiology and highlight potential targets for host-directed therapies in this high-risk population.</p><p><strong>Key points: </strong><b>Question:</b> What host-response patterns characterize severe HIV-associated tuberculosis among adults hospitalized with severe febrile illness in sub-Saharan Africa?<b>Findings:</b> In two prospective cohorts of adults hospitalized with severe febrile illness in Uganda, severe HIV-associated tuberculosis accounted for 18-21% of cases and was associated with higher rates of physiological instability and mortality. An eight-protein host-response signature reproducibly distinguished this high-risk phenotype, reflecting immune activation, tissue injury, extracellular matrix remodeling, and dysr
目的:重症结核病(TB)是世界范围内HIV感染者(PLWH)重症和死亡的主要原因。尽管如此,对严重艾滋病毒相关结核病(HIV/TB)的免疫病理学了解甚少。我们的目的是确定撒哈拉以南非洲地区严重艾滋病毒/结核病的免疫病理学特征。设计和环境:我们分析了来自乌干达两个前瞻性观察队列的严重未分化感染住院成人的蛋白质组学数据:城市发现队列(恩德培,N=241)和农村验证队列(托罗罗,N=253)。患者:成人(≥18岁)重症发热性疾病住院。干预措施:没有。测量和主要结果:在两个队列中,严重的hiv相关结核病很常见,影响了发现队列中18%的参与者和验证队列中21%的参与者。总体死亡率显著(发现组30天死亡率为22%,验证组60天死亡率为26%)。参与者被分为三种HIV/TB表型:HIV阴性无TB, PLWH无TB和PLWH伴微生物诊断结核病。我们在发现队列中应用了有序随机森林模型来识别强烈预测进行性HIV/TB表型的蛋白质。在这两个队列中,微生物诊断为结核病的PLWH发生危重疾病和死亡的风险最高(发现队列中30天死亡率为42%,验证队列中60天死亡率为52%)。8蛋白特征可靠地区分了这种表型,反映了巨噬细胞/树突状细胞活化(LAMP3)、NK细胞和t细胞刺激和细胞毒性(CD70, CRTAM)、b细胞活化(IGLC2)、蛋白酶介导的组织损伤(PRSS2)、凝血失调(SERPINA5)、细胞外基质重塑(EFEMP1)和GH/IGF轴失调(IGFBP3)的介质。结论:我们确定了由巨噬细胞/树突状细胞和细胞毒性淋巴细胞活化、细胞外基质重塑和凝血失调等介质定义的严重hiv相关结核病的免疫学特征。这些发现为HIV/TB病理生物学提供了新的见解,并突出了在这一高危人群中进行宿主定向治疗的潜在靶点。问题:在撒哈拉以南非洲因严重发热性疾病住院的成人中,哪些宿主反应模式是严重艾滋病毒相关结核病的特征?研究结果:在乌干达两个因严重发热性疾病住院的成人前瞻性队列中,严重艾滋病毒相关结核病占病例的18-21%,并与较高的生理不稳定性和死亡率相关。8蛋白宿主反应特征可重复区分这种高风险表型,反映免疫激活、组织损伤、细胞外基质重塑和凝血失调。意义:严重的艾滋病毒相关性结核病与一种独特的高风险临床表型相关,其特征是可重复的宿主反应模式,这可能为风险分层和宿主导向的治疗策略提供信息。
{"title":"Proteomic Immune Signatures of Severe HIV-Associated Tuberculosis in Sub-Saharan Africa: A Prospective, Multicenter Analysis from Uganda.","authors":"Jesse E Ross, Alin S Tomoiaga, Nicholas Owor, Xuan Lu, Joseph Shinyale, Tonny Kiyingi, Ignatius Asasira, Peter James Eliku, John Bosco Nsubuga, Christopher Nsereko, Irene Nayiga, Stephen Kyebambe, Thomas Ochar, Moses Kiwubeyi, Rittah Nankwanga, Kai Nie, Hui Xie, Sam Miake-Lye, Bryan Villagomez, Jingjing Qi, Steven J Reynolds, Martina Cathy Nakibuuka, John Kayiwa, Mercy Haumba, Joweria Nakaseegu, Xiaoyu Che, Risa Hoffman, John A Belperio, Julius J Lutwama, Seunghee Kim-Schulze, Max R O'Donnell, Barnabas Bakamutumaho, Matthew J Cummings","doi":"10.64898/2025.12.31.25343299","DOIUrl":"https://doi.org/10.64898/2025.12.31.25343299","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Objective: &lt;/strong&gt;Severe tuberculosis (TB) is a major cause of critical illness and death in people living with HIV (PLWH) worldwide. Despite this, the immunopathology of severe HIV-associated TB (HIV/TB) is poorly understood. We aimed to identify an immunopathologic signature of severe HIV/TB in sub-Saharan Africa.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Design and setting: &lt;/strong&gt;We analyzed proteomic data from two prospective observational cohorts of adults hospitalized with severe undifferentiated infection in Uganda: an urban discovery cohort (Entebbe, N=241) and a rural validation cohort (Tororo, N=253).&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Patients: &lt;/strong&gt;Adults (age ≥18 years) hospitalized with severe febrile illness.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Interventions: &lt;/strong&gt;None.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Measurements and main results: &lt;/strong&gt;Across both cohorts, severe HIV-associated TB was common, affecting 18% of participants in the discovery cohort and 21% in the validation cohort. Overall mortality was significant (30-day mortality of 22% in the discovery cohort & 60-day mortality of 26% in the validation cohort). Participants were stratified into three HIV/TB phenotypes: HIV-negative without TB, PLWH without TB, and PLWH with microbiologically diagnosed TB. We applied ordinal random forest models in the discovery cohort to identify proteins strongly predictive of progressive HIV/TB phenotype. In both cohorts, PLWH with microbiologically diagnosed TB were at highest risk of critical illness and death (30-day mortality of 42% in the discovery cohort & 60-day mortality of 52% in the validation cohort). An eight-protein signature reliably distinguished this phenotype, reflecting mediators of macrophage/dendritic cell activation (LAMP3), NK- and T-cell stimulation and cytotoxicity (CD70, CRTAM), B-cell activation (IGLC2), protease-mediated tissue injury (PRSS2), dysregulated coagulation (SERPINA5), extracellular matrix remodeling (EFEMP1), and GH/IGF axis dysregulation (IGFBP3).&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusions: &lt;/strong&gt;We identified an immunologic signature of severe HIV-associated TB defined by mediators of macrophage/dendritic cell and cytotoxic lymphocyte activation, extracellular matrix remodeling, and dysregulated coagulation. These findings offer new insight into HIV/TB pathobiology and highlight potential targets for host-directed therapies in this high-risk population.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Key points: &lt;/strong&gt;&lt;b&gt;Question:&lt;/b&gt; What host-response patterns characterize severe HIV-associated tuberculosis among adults hospitalized with severe febrile illness in sub-Saharan Africa?&lt;b&gt;Findings:&lt;/b&gt; In two prospective cohorts of adults hospitalized with severe febrile illness in Uganda, severe HIV-associated tuberculosis accounted for 18-21% of cases and was associated with higher rates of physiological instability and mortality. An eight-protein host-response signature reproducibly distinguished this high-risk phenotype, reflecting immune activation, tissue injury, extracellular matrix remodeling, and dysr","PeriodicalId":94281,"journal":{"name":"medRxiv : the preprint server for health sciences","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12838305/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146159940","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Normative Modelling of Brain Volume for Diagnostic and Prognostic Stratification in Multiple Sclerosis. 脑容量在多发性硬化症诊断和预后分层中的规范建模。
Pub Date : 2026-02-03 DOI: 10.1101/2025.09.14.25335702
Max Korbmacher, Ingrid Anne Lie, Kristin Wesnes, Eric Westman, Thomas Espeseth, Ole Andreas Andreassen, Lars T Westlye, Stig Wergeland, Hanne Flinstad Harbo, Gro Owren Nygaard, Kjell-Morten Myhr, Einar August Høgestøl, Øivind Torkildsen

Interpreting brain structure at the individual level remains a major challenge in neuroimaging, as population variability across age and sex limits the clinical utility of group-level findings. Here, we develop large-scale normative models of regional cortical and subcortical brain volumes from more than 62,000 healthy individuals across the lifespan and apply them to multiple sclerosis (MS) to enable individualised, reference-based assessments of grey matter morphology. We identify a temporally stable yet heterogeneous morphometric phenotype of MS, expressed as concordant deviations from age- and sex-adjusted reference values. Individual deviation profiles are clinically informative: both the magnitude and cumulative burden of lower-than-reference volumes are associated with disability cross-sectionally and longitudinally. Moreover, the profiles can be translated into interpretable stratification rules linked to disability trajectories and relapse dynamics. This work reframes known structural abnormalities into stable, individual-level deviation profiles, demonstrating how normative modelling can move neuroimaging beyond group averages toward clinically interpretable inference. Together, these findings establish a generalisable framework for translating population-level neuroimaging data into individual-level phenotypes with potential beyond multiple sclerosis.

背景:脑萎缩是多发性硬化症(MS)的标志。为了临床可翻译性和个人水平的预测,需要使用参考或规范模型将脑萎缩纳入更广泛人群的背景下。方法:从大型健康对照(HC)多队列数据集(N=63 115, 51%为女性)建立mri衍生脑容量参考模型。参考模型应用于两个独立的MS队列(N=362, t1 w扫描=953,随访时间长达12年)来评估与参考的偏差,定义为z值。我们利用个体水平向重要参考偏差状态(|Z|>·96)或向重要参考偏差状态(|Z|>·96)的过渡来评估偏差曲线的重叠及其随时间的稳定性。负二项模型用于极端偏差数量的病例-对照比较。线性模型用于评估MS和倾向匹配的hc之间Z-score偏差的差异,以及与基线和随时间的临床评分的关联。使用的规范BrainReference模型、脚本和使用说明是免费的。研究结果:我们确定了多发性硬化症的一个暂时稳定的脑形态表型。在多发性硬化症中,右侧和左侧丘脑的体积明显低于参考体积(在整个样本中有25%和26%的重叠)。这种极端小于参考值的数量在MS中为2.70,而在HC中为4.51,而在HC中为1.67。额外的偏差表明,在基线时和随着时间的推移,更强的残疾(扩展残疾状态量表:β= 0.22, 95% CI 0.12至0.32),节律性听觉串行添加测试分数(β=- 0.27, 95% CI - 0.52至- 0.02)和疲劳严重程度评分(β= 0.29, 95% CI 0.05至0.53),与EDSS (β= 0.07, 95% CI 0.02至0.13)。我们还提供了参考偏差的详细地图及其与临床评估的关联。解释:我们提出了一种与临床表现相关的多发性硬化症的异质脑表型,特别是涉及丘脑。资助:挪威多发性硬化症联盟,挪威研究理事会(#223273;#324252);挪威东南部地区卫生局(#2022080);以及欧盟的地平线2020研究与创新计划(#847776,#802998)。背景研究:本研究之前的证据:参考值和规范模型尚未广泛应用于多发性硬化症(MS)等神经系统疾病的神经影像学评估。我们在PubMed和Embase(2000年1月1日至2025年9月12日)中进行了文献检索,检索词为“MRI”和“多发性硬化症”,关键词为“规范模型*”和“萎缩”,不受语言限制。虽然规范模型已应用于精神和发育障碍,但很少有研究涉及它们在神经系统疾病中的应用。此外,尚不清楚是否存在MS特有的脑表型,这可能有助于诊断和患者分层。本研究的附加价值:我们提供了区域详细的脑形态测量图,这些图来自一个异质MS队列,跨越了广泛的年龄、性别、临床表型、疾病持续时间、残疾和扫描仪特征。通过利用规范建模,我们的方法使MS的个体化大脑表型与基于人口的规范样本相关。分析揭示了整个队列中受影响的大脑区域的异质性,但大脑体积较小的模式是一致的,特别是在丘脑和额叶皮质区域,这与残疾、认知障碍和疲劳有关。扫描仪、中心和纵向随访的稳健性支持了这些发现在现实世界MS人群中的稳定性和普遍性。所有现有证据的意义:规范模型提供了一种个性化、敏感和可解释的方法,通过提供个体特异性参考值来量化MS的大脑结构,支持比标准放射评估更早地检测神经变性,并改善患者分层。丘脑和额顶叶偏差的一致模式定义了MS的独特形态特征,在临床实践和临床试验中具有早期和个性化诊断和疾病监测的潜在效用。
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medRxiv : the preprint server for health sciences
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