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Effects of disinfectants on inactivation of mold spores relevant to the food industry: a review 消毒剂对食品工业相关霉菌孢子灭活的影响
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-12-01 DOI: 10.1016/j.fbr.2021.09.004
Vincent Visconti, Emmanuel Coton, Karim Rigalma, Philippe Dantigny

Due to the dissemination of airborne conidia and spores, molds can contaminate various surfaces. In the food industry sector, their presence and development can have health and economic implications. In order to control these undesirable microorganisms, various approaches can be used but the main one relies on the use of disinfectants. The objective of this review is to report the existing studies on the effect of various disinfectant molecules (i.e., sodium hypochlorite, chlorine dioxide, ethanol and other alcohols, hydrogen peroxide, peracetic acid, and quaternary ammonium compounds) on the inactivation of fungal spores. These studies were sorted depending on the targeted fungal species. Noteworthy, in the food industry, four log and three log reductions are required to claim a fungicidal activity for suspension (European Standard 1650, 2019) and surface (European Standard 13697/IN1, 2019) treatments, respectively. Most of the presented studies concerned Penicillium and Aspergillus species (44 and 31% of the literature, respectively). In general, for a given disinfection procedure, ascospores were more resistant than conidia, and Aspergillus conidia were more resistant than Penicillium ones. However, the variability of encountered molds (e.g. species, strains, physiological state) and disinfection procedures (e.g. molecules, concentrations, contact time) affected the efficacy of disinfectants.

由于空气传播的分生孢子和孢子,霉菌可以污染各种表面。在食品工业部门,它们的存在和发展可能对健康和经济产生影响。为了控制这些有害的微生物,可以使用各种方法,但主要的方法是使用消毒剂。本文综述了各种消毒剂分子(次氯酸钠、二氧化氯、乙醇等醇类、过氧化氢、过氧乙酸和季铵化合物)对真菌孢子灭活作用的研究进展。这些研究是根据目标真菌种类进行分类的。值得注意的是,在食品行业,要求在悬浮液(欧洲标准1650,2019)和表面(欧洲标准13697/IN1, 2019)处理中分别减少4个对数和3个对数来声明杀真菌活性。目前大多数研究涉及青霉菌和曲霉菌(分别占文献的44%和31%)。一般来说,对于给定的消毒程序,子囊孢子比分生孢子更具抗性,分生曲霉比青霉更具抗性。然而,遇到的霉菌(如种类、菌株、生理状态)和消毒程序(如分子、浓度、接触时间)的可变性影响了消毒剂的效果。
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引用次数: 7
Sporobolomyces and Sporidiobolus – non-conventional yeasts for use in industries 孢子菌和孢子球。工业用的非常规酵母
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-09-01 DOI: 10.1016/j.fbr.2021.06.001
Anna M. Kot , Marek Kieliszek , Kamil Piwowarek , Stanisław Błażejak , Cassamo Ussemane Mussagy

The search for new, biotechnologically useful yeast strains has been carried out in many research centers in the world. Sporobolomyces and Sporidiobolus are examples of such useful yeasts, that can be used as a source of many valuable metabolites in industries. This article describes the modern taxonomy of these yeasts, which resulted from many years of research, including both classical microbiology and genetic analyses. Subsequently, the paper presents a review of scientific studies on the biosynthesis of various extracellular and intracellular metabolites produced by Sporobolomyces and Sporidiobolus yeasts, which are of great importance in the contemporary food, feed, and pharmaceutical industries. Such metabolites include exopolysaccharides, lipids, carotenoids, enzymes, and γ-decalactone. Aiming at developing a sustainable circular bioeconomy, this study considers two directions of use of these yeasts, i.e., as a feed additive and as an antagonist in the biocontrol of plant materials. This article is one of the first to organize the knowledge collected from published studies and present the contemporary scientific achievements and prospects for the biotechnological use of Sporobolomyces and Sporidiobolus yeasts.

世界上许多研究中心都在寻找新的、生物技术上有用的酵母菌株。孢子菌和球孢酵母就是这种有用的酵母的例子,它们可以作为工业中许多有价值的代谢物的来源。本文描述了这些酵母的现代分类,这是多年研究的结果,包括经典微生物学和遗传分析。随后,本文综述了孢子菌(Sporobolomyces)和孢子酵母(Sporidiobolus yeast)产生的各种细胞外和细胞内代谢物的生物合成的科学研究,这些代谢物在当代食品、饲料和制药工业中具有重要意义。这些代谢物包括外多糖、脂质、类胡萝卜素、酶和γ-癸内酯。为了发展可持续的循环生物经济,本研究考虑了这些酵母在饲料添加剂和植物材料生物防治中的拮抗剂两个方向的应用。本文首先整理了已发表的研究成果,介绍了孢子菌和孢子酵母的当代科学成果和生物技术应用前景。
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引用次数: 15
Repurposing benzimidazoles to fight Cryptococcus 苯并咪唑类药物的再利用对抗隐球菌
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-09-01 DOI: 10.1016/j.fbr.2021.04.002
Haroldo C. de Oliveira , Marcio L. Rodrigues

The human diseases caused by the fungal pathogens Cryptococcus neoformans and Cryptococcus gattii are associated with high rates of mortality and toxic or cost-prohibitive therapeutic protocols. The need for affordable antifungals to combat cryptococcal disease is unquestionable. Benzimidazoles are potentially attractive antifungal compounds that were introduced in clinical practice nearly 60 years ago to treat helminthic infections. In addition to being safe, their cost of treatment is extraordinarily low. Several studies suggested benzimidazoles as promising anticryptococcal agents combining low-cost and high antifungal efficacy. So far, anti-cryptococcal activities were demonstrated for 16 different benzimidazoles. In particular, albendazole, mebendazole, flubendazole, and fenbendazole have potent in vitro antifungal activity against C. neoformans and C. gattii. Mice lethally infected with C. neoformans and treated with fenbendazole had 100 % survival when the drug was administered intranasally. In this review, we discuss the potential of benzimidazoles as potential anti-cryptococcal agents, including a general literature overview, most recent findings, mechanism of antifungal action, costs, toxicity, and antifungal potential in vivo.

由真菌病原体新型隐球菌和加蒂隐球菌引起的人类疾病与高死亡率和毒性或费用过高的治疗方案有关。毫无疑问,需要负担得起的抗真菌药物来对抗隐球菌病。苯并咪唑是一种具有潜在吸引力的抗真菌化合物,近60年前被引入临床实践,用于治疗蠕虫感染。除了安全之外,它们的治疗费用也非常低。一些研究表明,苯并咪唑具有低成本和高抗真菌功效,是一种有前景的抗隐球菌药物。到目前为止,已证实16种不同的苯并咪唑具有抗隐球菌活性。特别是,阿苯达唑、甲苯达唑、氟苯达唑和芬苯达唑对新生C.和C. gtii具有有效的体外抗真菌活性。用芬苯达唑治疗的致死性新生梭状芽胞杆菌感染的小鼠在鼻内给药时存活率为100%。在这篇综述中,我们讨论了苯并咪唑作为潜在的抗隐球菌药物的潜力,包括一般文献综述、最新发现、抗真菌作用机制、成本、毒性和体内抗真菌潜力。
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引用次数: 4
Impact of global megatrends on the spread of microscopic fungi in the Pannonian Biogeographical Region 全球大趋势对潘诺尼亚生物地理区微观真菌传播的影响
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-09-01 DOI: 10.1016/j.fbr.2021.03.006
Donát Magyar , Zsófia Tischner , Anna Páldy , Sándor Kocsubé , Zsuzsanna Dancsházy , Ágnes Halász , László Kredics

Megatrends are slow processes that are hardly noticeable initially, but later cause long-term global effects. The European Environmental Agency (EEA) has set 11 global megatrends. Some of them - globalization, risk of pandemic, technological development and climate change - have major impacts on microfungi in a vulnerable region of Europe, the Pannonian Biogeographical Region. Due to the globalization, high amount of inocula is imported with tropical fruits, soil and packaging materials. Due to technological development, these fungi gain new habitats in the immediate surroundings of humans. In most of the cases these are considered to be extreme environments for which fungi can increasingly adapt. As a result of climate change, non-native species are more likely to colonize the natural habitats in the region. Some of these fungal species have great effect on human health and agriculture. The effects of global megatrends on fungi raise new issues not only from the point of view of economy and health, but also from plant protection and environmental perspectives. Because of the increasing presence of these fungal species, it is important to take them into account during the development of adaptation strategies.

大趋势是一个缓慢的过程,最初很难引起注意,但后来会产生长期的全球影响。欧洲环境署(EEA)设定了11个全球大趋势。其中一些因素——全球化、流行病风险、技术发展和气候变化——对欧洲潘诺尼亚生物地理区这一脆弱地区的微真菌产生了重大影响。随着全球化的发展,大量的疫苗需要进口热带水果、土壤和包装材料。由于技术的发展,这些真菌在人类周围获得了新的栖息地。在大多数情况下,这些被认为是真菌能够逐渐适应的极端环境。由于气候变化,非本地物种更有可能在该地区的自然栖息地定居。其中一些真菌对人类健康和农业有很大影响。全球大趋势对真菌的影响不仅从经济和健康的角度,而且从植物保护和环境的角度提出了新的问题。由于这些真菌物种的存在越来越多,在制定适应策略时考虑到它们是很重要的。
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引用次数: 5
Detection and identification of fungal species by electronic nose technology: A systematic review 电子鼻技术在真菌种类检测与鉴定中的应用综述
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-09-01 DOI: 10.1016/j.fbr.2021.03.005
Inês Mota , Rita Teixeira-Santos , João Cavaleiro Rufo

A rapid and effective identification of fungal species is essential for numerous applications, and electronic nose systems are being proposed as suitable alternatives to currently available fungi identification techniques. Hence, the present review aims to unveil all published information concerning fungi identification by electronic nose systems.

A systematic review of the literature was conducted according to the PRISMA guidelines. A total of 16 articles met the inclusion criteria and were included in the analysis. The results of the reviewed studies demonstrated that effective detection of fungi was possible through sensor-based electronic nose systems, which may actually function as a mycotoxin screening tool for several applications.

The obtained results suggest that the sensor-based electronic nose systems may not only screen different fungi genera, but also identify the associated species. This technology has already been experimented in several fields, from food industry to clinical practice.

By summarizing these results, the present review may accelerate the standardization of electronic noses in fungi detection and discrimination, allowing a faster and more efficient screening of samples.

快速有效的真菌种类鉴定对于许多应用都是必不可少的,而电子鼻系统被提议作为现有真菌鉴定技术的合适替代品。因此,本综述旨在揭示所有已发表的关于电子鼻系统真菌鉴定的信息。根据PRISMA指南对文献进行系统综述。共有16篇文章符合纳入标准,被纳入分析。综述的研究结果表明,通过基于传感器的电子鼻系统可以有效地检测真菌,该系统实际上可以作为真菌毒素筛选工具在几种应用中发挥作用。结果表明,基于传感器的电子鼻系统不仅可以筛选不同的真菌属,还可以识别相关的物种。这项技术已经在几个领域进行了试验,从食品工业到临床实践。通过总结这些结果,本综述可以加速电子鼻在真菌检测和鉴别方面的标准化,从而更快、更有效地筛选样品。
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引用次数: 20
A review of mycotoxin biosynthetic pathways: associated genes and their expressions under the influence of climatic factors 真菌毒素生物合成途径的研究进展:气候因素影响下的相关基因及其表达
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-09-01 DOI: 10.1016/j.fbr.2021.04.003
Oluwatobi Kolawole , Julie Meneely , Awanwee Petchkongkaew , Christopher Elliott

Fungal contamination of agricultural commodities, particularly by mycotoxigenic fungi, represents an enormous concern for global food security in terms of feeding the world's growing population with sufficient and safe food. Not only do they reduce crop yield and quality, but they also produce substantial numbers of mycotoxins, which pose serious adverse health effects in human and animals. As the genome of most mycotoxigenic species have been sequenced, the gene clusters involved in the biosynthesis of agriculturally important mycotoxins including aflatoxins, fumonisins, ochratoxins, zearalenone and trichothecenes, have been largely identified and characterised, with their roles elucidated by researchers. This review provides a comprehensive overview of the current knowledge of genes involved in the biosynthetic pathways of mycotoxins. In addition, the influence of climatic factors including water, temperature and carbon dioxide on differential mycotoxin gene expressions have been highlighted. Overall, the relationship between the relative expression of key regulatory and structural genes under different environmental conditions is significantly correlated with mycotoxins production. This indicates that mycotoxin gene induction can be used as a reliable indicator or marker to monitor mycotoxin production pre-and-post harvest. Furthermore, current strategies to manage mycotoxin risks still require improvement. Thus, an accurate understanding of the molecular mechanisms of mycotoxin biosynthesis in mycotoxigenic species could help to develop an innovative, robust targeted control strategy. This could include the exploitation of novel compounds, which can inhibit biosynthetic genes, to minimise mycotoxin risks.

农产品的真菌污染,特别是由产霉菌毒素真菌造成的真菌污染,在为世界上不断增长的人口提供充足和安全的食物方面,对全球粮食安全构成了巨大关切。它们不仅降低作物产量和质量,而且还产生大量真菌毒素,对人类和动物的健康造成严重的不利影响。随着大多数产真菌毒素物种的基因组测序,参与农业上重要真菌毒素生物合成的基因簇,包括黄曲霉毒素、伏马菌素、赭曲霉毒素、玉米赤霉烯酮和毛霉烯,已经得到了很大程度的鉴定和表征,研究人员已经阐明了它们的作用。本文综述了真菌毒素生物合成途径中涉及的基因的最新知识。此外,还强调了水、温度和二氧化碳等气候因素对霉菌毒素基因差异表达的影响。综上所述,不同环境条件下关键调控基因和结构基因的相对表达量与霉菌毒素产生的关系显著相关。这表明,真菌毒素基因诱导可以作为一种可靠的指标或标记来监测收获前后的霉菌毒素产量。此外,目前管理霉菌毒素风险的战略仍需改进。因此,对产霉菌毒素物种中真菌毒素生物合成的分子机制的准确理解有助于开发一种创新的、强有力的靶向控制策略。这可能包括开发可以抑制生物合成基因的新化合物,以尽量减少霉菌毒素的风险。
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引用次数: 21
An overview of the virulence factors and the biocontrol potential of Sarocladium oryzae 米弧菌的毒力因素及生物防治潜力综述
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-09-01 DOI: 10.1016/j.fbr.2021.04.001
Marcio Vinicius De Carvalho Barros Côrtes , Rafaela Araújo Guimarães , Denise Maria Guimarães Freire , Anne Sitarama Prabhu , Valacia Lemes da Silva-Lobo

Sarocladium oryzae is a filamentous fungus, commonly related to sheath rot, a disease until recently considered of low relevance but whose frequency has increased worldwide in rice cultivation. Few research groups have studied this microorganism, and consequently, the knowledge concerning biochemical and genetic factors that differentiate isolates within populations in terms of virulence (virulence factors/phytotoxin production) is limited. Some works have demonstrated that avirulent isolates of S. oryzae may act as biological control agents (BCAs), primarily due to their high potential for production of the secondary metabolite cerulenin, a potent antifungal. For these reasons, the goal of this paper is to review what is known about the virulence factors of S. oryzae, to highlight the main secondary metabolites produced by the fungus and their role in sheath rot development, and to try to establish a relationship between virulent, avirulent and potential BCA strains of S. oryzae.

稻瘟弧菌是一种丝状真菌,通常与鞘腐病有关,鞘腐病直到最近才被认为是一种相关性较低的疾病,但其频率在世界范围内的水稻种植中有所增加。很少有研究小组研究过这种微生物,因此,在毒力(毒力因子/植物毒素产生)方面区分种群内分离株的生化和遗传因素的知识是有限的。一些研究表明,无毒的S. oryzae分离株可能作为生物防治剂(bca),主要是因为它们具有生产次生代谢物蓝绿蛋白的高潜力,这是一种有效的抗真菌物质。基于这些原因,本文的目的是回顾已知的米曲霉毒力因子,重点介绍该真菌产生的主要次生代谢产物及其在鞘腐病发生中的作用,并试图建立米曲霉毒力、无毒和潜在BCA菌株之间的关系。
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引用次数: 1
Beat the heat: correlates, compounds, and mechanisms involved in fungal thermotolerance 高温:真菌耐热性的相关物质、化合物和机制
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-06-01 DOI: 10.1016/j.fbr.2021.03.002
Ellie Rose Mattoon , Arturo Casadevall , Radames JB. Cordero

Understanding the how behind the polyphyletic trait of fungal thermotolerance has important implications to both medical and industrial pursuits. In this review, our goal is to synthesize research on fungal thermotolerance from industry, biology, and health science to provide an overview of where the field stands. We first consider correlative traits, which may not directly cause thermotolerance but have demonstrated strong associations with it. We then look into the biomolecules involved in sensing and responding to heat shock and/or stress. Lastly, we examine an overview of physiological mechanisms, both natural and man-made, which fungi can use to withstand heat stress both in the moment and among their progeny. Each section makes attempts to list relevant applications of various traits, in addition to potential knowledge gaps that will need to be addressed in future research. This review highlights that, although thermotolerance is a complex concept with diverse manifestations throughout the fungal kingdom, there are multiple patterns in the heat-shock response worthy of further study.

了解真菌耐热性多系性状背后的原因对医学和工业追求都具有重要意义。本文将从工业、生物学和健康科学三个方面对真菌耐热性的研究进行综述,以期对真菌耐热性的研究现状进行综述。我们首先考虑相关性状,这些性状可能不直接导致耐热性,但已证明与耐热性有很强的相关性。然后,我们研究了参与感知和响应热休克和/或压力的生物分子。最后,我们研究了生理机制的概述,包括自然和人为的,真菌可以用来在当下和后代中承受热应激。每个部分都试图列出各种特征的相关应用,以及在未来研究中需要解决的潜在知识空白。这篇综述强调,尽管耐热性是一个复杂的概念,在整个真菌界具有多种表现,但热休克反应有多种模式值得进一步研究。
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引用次数: 8
Nutrient sensing and acquisition in fungi: mechanisms promoting pathogenesis in plant and human hosts 真菌的营养感知和获取:促进植物和人类宿主发病的机制
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-06-01 DOI: 10.1016/j.fbr.2021.01.002
Louise E. Johns , Gustavo H. Goldman , Laure N.A. Ries , Neil A. Brown

Fungal pathogens destroy our crops and cause hazardous human infections, therefore threatening our health and food security. The ability of fungal pathogens to sense and respond to dynamic host microenvironments enables the establishment and progression of disease. Sensing nutritional cues is vital throughout fungal infection of either plants or mammals: enabling the pathogen to invade, adapt and survive in the face of host immunity. Acquiring nutrients from their host for energy, growth and repair is also essential to a fungal pathogen's success. Cell-surface proteins embedded in the fungal plasma membrane sense and transport host macro- and micronutrients, including carbon and nitrogen sources and minerals such as iron and zinc. Using examples from model crop (Fusarium graminearum, Magnaporthe oryzae and Ustilago maydis) and human (Aspergillus fumigatus, Candida albicans, Cryptococcus neoformans) pathogens we review the nutrient sensing and transporting roles of fungal cell-surface receptor, transporter and transceptor proteins, and their importance to plant and human fungal disease. We discuss how their cellular localisation, central role in cell signalling and importance to disease makes these fungal cell-surface proteins candidates in the search for new strategies to control fungal diseases, while highlighting the areas where further research is needed to make this possible.

真菌病原体破坏我们的作物并造成危险的人类感染,因此威胁到我们的健康和粮食安全。真菌病原体感知和响应动态宿主微环境的能力使疾病的建立和进展成为可能。在植物或哺乳动物的真菌感染过程中,感知营养线索至关重要:使病原体能够入侵、适应并在宿主免疫的情况下生存。从宿主那里获取营养以获取能量、生长和修复也是真菌病原体成功的必要条件。嵌入真菌质膜的细胞表面蛋白质感知和运输宿主的宏量和微量营养素,包括碳和氮源以及铁和锌等矿物质。本文以模式作物(稻谷镰刀菌、稻谷Magnaporthe和黑穗病菌)和人类(烟曲霉、白色念珠菌、新型隐球菌)病原体为例,综述了真菌细胞表面受体、转运体和受体蛋白的营养感知和转运作用,以及它们在植物和人类真菌疾病中的重要性。我们讨论了它们的细胞定位、在细胞信号传导中的中心作用和对疾病的重要性如何使这些真菌细胞表面蛋白成为寻找控制真菌疾病新策略的候选蛋白,同时强调了需要进一步研究的领域。
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引用次数: 8
Delivering the goods: Fungal secretion modulates virulence during host–pathogen interactions 运送货物:真菌分泌在宿主-病原体相互作用过程中调节毒力
IF 6 2区 生物学 Q1 MYCOLOGY Pub Date : 2021-06-01 DOI: 10.1016/j.fbr.2021.03.007
Michael J. Bradshaw , Holly P. Bartholomew , Jorge M. Fonseca , Verneta L. Gaskins , Dov Prusky , Wayne M. Jurick II

Fungi secrete a variety of compounds that have wide ranging effects on society and govern the outcome of host–pathogen interactions. The secreted products range from powerful toxins and carcinogens, to beneficial compounds such as ethanol used in common commercial practices, and the ‘wonder drug’ penicillin. Much research in the past 50 y has focused on identifying the genes and their functions relating to the fungal secretome. Recent advances into the mechanisms by which phytopathogenic fungal secretion systems function and modulate virulence have broad implications for the agricultural and biotechnological industries. In this review, we focus on secretion mechanisms in phytopathogenic fungi with examples from key plant–pathogen systems. Current progress and knowledge gaps regarding secretion pathways and their regulation are discussed. We highlight possible approaches to using novel molecular techniques to generate alternative control methods to synthetic pesticides.

真菌分泌多种化合物,对社会有广泛的影响,并控制宿主-病原体相互作用的结果。分泌的产物从强大的毒素和致癌物到有益的化合物,如在常见的商业实践中使用的乙醇,以及“神奇药物”青霉素。在过去的50年中,许多研究都集中在鉴定与真菌分泌组有关的基因及其功能上。植物病原真菌分泌系统的功能和毒力调节机制的最新进展对农业和生物技术工业具有广泛的意义。本文以植物病原系统为例,对植物病原真菌的分泌机制进行了综述。讨论了目前关于分泌途径及其调控的进展和知识空白。我们强调了使用新的分子技术来产生替代合成农药的控制方法的可能方法。
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引用次数: 6
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Fungal Biology Reviews
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