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Effects of processing methods on the immunoreactivity of silver carp parvalbumin 加工方法对鲢鱼小白蛋白免疫反应性的影响
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38222
Cai Qiufeng, Wang Xichang, G. Cheng, Shen Haiwang, Liu Guangming, Cao Min-jie
Parvalbumin(PV)is the major allergen in fish products,which could induce serious IgE-mediated food anaphylaxis when sensitive people encountered with it.A variety of clinical symptoms including angioedema,respiratory symptoms,gastrointestinal symptoms,and even death could be caused after ingestion or contact with fish or fish products or even just inhalation of fish cooking vapors.Besides monitoring the allergens in foods,reducing allergenicity of fish products is another important way to decrease the incidence of fish allergy.Therefore,the purpose of this study was to analyze the change of immunoreactivity and digestion stability of parvalbumin after different food processings.Four processing methods including surimi preparation,roast,fried,high pressured methods were evaluated in this study.Tricine-SDS-PAGE and Western-blotting were used to determine the variation of contents,immunoreactivity and digested stability of parvalbumin in the processed products.The results showed that,though surimi prepartion,roast,and fried processing could increase the gastric stability,high pressure processing could effectively reduce the content and immunoreactivity of parvalbumin in fish products.And the significance of these findings remains to be established.
小白蛋白(PV)是鱼类产品中的主要过敏原,当敏感人群接触到它时,可引起严重的ige介导的食物过敏反应。食用或接触鱼或鱼制品,甚至只是吸入鱼的蒸煮蒸汽,都可能导致血管性水肿、呼吸道症状、胃肠道症状等多种临床症状,甚至死亡。除了监测食物中的过敏原外,降低鱼类制品的致敏性是降低鱼类过敏发生率的另一个重要途径。因此,本研究的目的是分析小白蛋白在不同食品加工后的免疫反应性和消化稳定性的变化。本研究对鱼糜制备、烘烤、油炸、高压四种加工方法进行了评价。采用Tricine-SDS-PAGE和Western-blotting检测加工产品中小白蛋白的含量变化、免疫反应性和消化稳定性。结果表明,虽然鱼糜制备、烘烤和油炸加工可以提高胃的稳定性,但高压加工可以有效降低鱼制品中小白蛋白的含量和免疫反应性。这些发现的意义还有待确定。
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引用次数: 0
Quantitative trait locus analysis of four economic traits in one kind of common carp 一种鲤鱼四种经济性状的数量性状位点分析
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38290
Weihua Lv, Y. Kuang, Xianhu Zheng, D. Cao, Chao Li, Cui-yun Lu, Xiaowen Sun
In this study,the reference panel contained 92 individuals,which were a F2 family obtained by mating of F1 hybrids derived from crossing Barbless carp(Cyprinus pellegrini)with Hebao-cold tolerance red carp(Cyprinus carpio wuyuanensis),and the genetic linkage map was constructed with 300 microsatellites,which was used to detect the QTLs for standard length(SL),body thickness(BT),body height(H)and body weight(W)in the panel by GridQTL software.The results showed that 17 related QTLs distributed in the 6 linkage groups were obtained.Four QTLs related to standard length,of which the linkage group of LG5,LG7,LG19 and LG32 were at 5% significant level,but LG32 was at 1% significant level,accounting 5.14%,10.2%,7.02%,9.36% of phenotypic variation,respectively.Four QTLs were identified for body thickness in LG11,LG19,which were at 5% significant level,QTL based on LG5 1% was at significant level,accounting for 6.54%,6.42% and 8.43% of phenotypic variation,respectively.Six QTLs were associated with body height in LG5,LG7,LG10,LG11,LG19 and LG32.LG7 was at 1% significant level,whereas the others were at 5% significant level,accounting 8.95%,6.34%,5.92%,6.29%,6.78%,7.79% of phenotypic variation.Three QTLs were responsible for body weight and LG5,LG7 were at 5% significant level and LG32 was at 1% significant level,which accounted for 6.44%,5.55%,8.36%.Hybrid progenies crossed by two carp strains have been used in this study,which enriched the diversity of QTL population.It is a foundation for further QTL comparative analysis with whole genome level,and common QTL identification in different strains or breeds of carp.It will also be of great assistance in marker-assisted selection(MAS)in common carp.
本研究以无刺鲤(Cyprinus pellegrini)与合宝耐寒红鱼(Cyprinus carpio wuyuanensis)杂交获得的F1杂交种F2家族92个个体为参考样本,利用300颗微卫星构建遗传连锁图谱,利用GridQTL软件对样本中的标准长度(SL)、体厚(BT)、体高(H)和体重(W)的qtl进行检测。结果表明,获得了分布在6个连锁群中的17个相关qtl。4个与标准长度相关的qtl,其中LG5、LG7、LG19和LG32连锁群达到5%显著水平,LG32为1%显著水平,分别占表型变异的5.14%、10.2%、7.02%和9.36%。鉴定出4个与LG11、LG19体厚相关的QTL,均达到5%的显著水平,基于LG5 1%的QTL达到显著水平,分别占表型变异的6.54%、6.42%和8.43%。在LG5、LG7、LG10、LG11、LG19和LG32中,有6个qtl与体高相关。LG7居1%显著水平,其余居5%显著水平,占表型变异的8.95%、6.34%、5.92%、6.29%、6.78%、7.79%。3个qtl对体重和LG5、LG7和LG32的影响分别达到5%和1%的显著水平,分别占6.44%、5.55%和8.36%。本研究利用两个鲤鱼品系杂交后代,丰富了QTL群体的多样性。为进一步进行全基因组水平的QTL比较分析和不同品系或品种间的共同QTL鉴定奠定了基础。这对普通鲤鱼的标记辅助选择(MAS)也有很大的帮助。
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引用次数: 0
Recombinant expression and antimicrobial activity analysis of macrophage inflammatory protein-3 α in Mauremys mutica 巨噬细胞炎症蛋白-3 α在鼠毛线虫中的重组表达及抗菌活性分析
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38304
J. Long, Xinping Zhu, Yan Shi, Jian Zhao, X. Hong
Macrophage inflammatory protein-3α is a kind of inducible secreted protein which plays an important role in the immune response and inflammation damage in many diseases through the corresponding receptors on a variety of immune cells to produce chemokines.We obtained the ORF of MaCCL20 by RT-PCR,inserted into the expression vector pET-32a,and then transformed into E.coli BL21.We expressed the fusion protein pET-32a-CCL20 after IPTG induction,prepared the polyclonal antibodies and did research on Western blot and antimicrobial activity of it.The experiments show that the fusion protein is highly expressed in the conditions of 37 ℃,0.8 mmol/L IPTG for 4 hours.The SDS-PAGE gel electrophoresis figure shows that the relative molecular weight of the fusion protein is 30 ku which is the same as predicted before.We got a single band after His Bind nickel column purification indicating the high purity of MaCCL20 recombinant protein.The antibacterial experiments show that MaCCL20 recombinant protein has strong antibacterial effects on Staphylococcus aureus,Serratia marcescens,and Aeromonas hydrophila.
巨噬细胞炎症蛋白-3α是一种诱导分泌蛋白,通过在多种免疫细胞上的相应受体产生趋化因子,在多种疾病的免疫反应和炎症损伤中发挥重要作用。我们通过RT-PCR获得MaCCL20的ORF,插入表达载体pET-32a中,转化大肠杆菌BL21。经IPTG诱导表达融合蛋白pET-32a-CCL20,制备多克隆抗体,并对其进行Western blot和抗菌活性研究。实验表明,在37℃、0.8 mmol/L IPTG条件下,融合蛋白在4小时内高表达。SDS-PAGE凝胶电泳图显示融合蛋白的相对分子量为30 ku,与之前预测的一致。经His Bind镍柱纯化得到一条单条带,表明MaCCL20重组蛋白纯度高。抑菌实验表明,MaCCL20重组蛋白对金黄色葡萄球菌、粘质沙雷菌、嗜水气单胞菌均有较强的抑菌作用。
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引用次数: 0
Limited subculture and biological characteristic analysis of three cell lines from fat greenling(Hexagrammos otakii) 三种脂绿鱼细胞系有限传代培养及生物学特性分析
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38314
Xia Li, Y. Guo, Yan-jie Qin, Zhiqiang Jiang
Fat greenling(Hexagrammos otakii)is one of the important commercial fishes along the northern coast of China,and its artificial breeding and culture have been developed recently.Primary culture of fin,lip and kidney from H.otakii was studied using tissue explant method.Until now cells of three tissues have been subcultured at passage 30 for fin,passage 31 for lip,passage 35 for kidney respectively.The results showed that the fin and lip tissues could be dispersed quickly after being digested with 0.5% hyaluronidase and 0.2% collagenase Ⅱ.The optimal growth conditions for fin,lip and kidney tissues were 20% fetal bovine serum(FBS),5 ng/mL basic fibroblast growth factor(bFGF),20 μg/mL chondroitin sulfate and 40 ng/mL insulin-like growth factor-I to medium DMEM/F12(pH 7.2)at 25 ℃.The doubling time of fin,lip and kindey cell numbers was about 58.7 h,50.4 h and 32.9 h at the 20th passage.Karyotype analysis of 100 metaphase plates revealed that the feature diploid chromosome number was 2n=48 in fin,lip and kidney cell at 25th passage.The cell livability of these three kinds of cell were(84.59±1.07)%,(85.75±1.03)% and(87.39±1.05)%,respectively,when recovered after being stored in liquid nitrogen for 60 d at the 20th.Now,the three kinds of cell have been preserved in China Center for Type Culture Collection(CCTCC).The methods of cell culture in vitro could be used to prevent and cure fish diseases and the pathomechanism study.
黄颡鱼是中国北方沿海重要的商业鱼类之一,近年来在人工养殖和养殖方面发展迅速。采用组织外植体法对御竹鱼鱼鳍、唇和肾进行了原代培养。到目前为止,三种组织的细胞分别在鳍传代30代、唇传代31代、肾传代35代传代培养。结果表明:用0.5%透明质酸酶和0.2%胶原酶Ⅱ消化后,鱼鳍和鱼唇组织均能迅速分散;鱼鳍、嘴唇和肾脏组织的最佳生长条件为:20%胎牛血清(FBS)、5 ng/mL碱性成纤维细胞生长因子(bFGF)、20 μg/mL硫酸软骨素和40 ng/mL胰岛素样生长因子- 1,加入培养基DMEM/F12(pH 7.2), 25℃。第20代时,鱼鳍、唇部和亲缘细胞数倍增时间分别为58.7 h、50.4 h和32.9 h。100个中期板的核型分析表明,鳍、唇和肾细胞在25代时的特征二倍体染色体数目为2n=48。3种细胞在液氮中保存60 d后,20日恢复的细胞存活率分别为(84.59±1.07)%、(85.75±1.03)%和(87.39±1.05)%。目前,这三种细胞保存在中国体字培养收藏中心。体外细胞培养方法可用于鱼类疾病的防治及病理机制研究。
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引用次数: 0
The influences of silver carp and bighead carp in bio-manipulation pen on the community structure of cladocera in Lake Gehu 生物操纵池中鲢鱼和鳙鱼对葛湖枝类动物群落结构的影响
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38366
Lijing Chen, Z. Mei, Youjia Kong, Qigen Liu
As a dominant group of zooplankton in fresh water worldwide,Cladocera plays an important role in the material circulation and energy flow of water ecosystem,and it is not only a consumer for small animals and algae,but also food for zooplanktivorous fish.Many current studies have showed that non-classical bio-manipulation,a way to prevent water bloom and improve water environment by controlling fierce fish and stocking planktonivorous filter-feeding fish(such as Hypophthalmichthys molitrix and Aristichys mobilis),can be effective.However,to some extent,phytoplankton and community structure of cladocera may be varied with different stocking patterns,fish density and lake type.Lake Gehu,a total area of 164 km2 crossing Wujin and Yixing,is located in the south of Jiangsu province.In recent years,more attention was paid to the researches about the influence of H.ypophthalmichthys molitrix and Aristichys mobilis on lake ecosystems,of which the past domestic studies were mainly focused on aquatic plants,physical and chemical factors,the control of eutrophication and phytoplankton,however,no reports have been made in the bio-manipulation fish pen of Lake Gehu about the influences of abiotic environmental factors and filter-feeding fish on cladocera,and that is our work to fill in the blanks.Thus,from December 2009 to November 2010,a large bio-manipulation fish pen with the stock of silver carp(H.molitrix)and bighead carp(A.mobilis)inside was built to control the cyanobacterial bloom in Lake Gehu,an investigation and laboratory analysis was carried out to compare the variation of the cladoceran community structure between region A outside of the fish pen and regions B,D,C with different ratios of fish(1∶ 4,1∶ 2,1∶ 1.5),which was combined to discuss the influences of bio-manipulation fish pen on cladocera and the effects on improving eutrophic water.Through the identification,32 species of cladocera,belonging to 7 families,14 genera were collected inside and outside of the fish pen where there were no differences between species,and the annual average density and biomass of region A were both higher than any region inside of the fish pen,having a significant difference(P0.05)with region B,respectively.The main dominant species were Bosmina longirostris,Ceriodaphnia cornuta and Moina sp..In August,the density of Moina sp.in region A had significant differences from region B and D,while 3 regions inside of fish pen had no apparent differences,et al.,the results of which indicated that Moina sp.with a larger volume was easier to be preyed by fish than the other two small species.Moreover,some characteristic parameters of water were investigated to depict the correlation between cladoceran and environmental variables.CCA(Canonical Correspondence Analysis)showed that water temperature,permanganate index(CODMn),nitrate nitrogen(NO3-N)and water transparency(SD)were the main abiotic factors affecting the community structure of cladocera.
枝藻是世界范围内淡水浮游动物的优势类群,在水体生态系统的物质循环和能量流动中起着重要作用,不仅是小动物和藻类的消耗者,也是浮游动物食性鱼类的食物。目前许多研究表明,通过控制凶猛鱼类和放养浮游滤食性鱼类(如Hypophthalmichthys molitrix和Aristichys mobilis)来防止水华和改善水环境的非经典生物操作是有效的。然而,不同的放养方式、鱼密度和湖泊类型对浮游植物和枝纲的群落结构有一定的影响。葛湖位于江苏省南部,横跨武进和宜兴,总面积164平方公里。近年来,关于高眼微鱼(h.p opophthalmichthys molitrix)和水蛭(Aristichys mobilis)对湖泊生态系统影响的研究越来越受到重视,国内以往的研究主要集中在水生植物、理化因素、富营养化控制和浮游植物等方面,而在格湖生物操纵鱼池中,关于非生物环境因素和滤食性鱼类对枝类动物的影响尚未见报道,这是我们的工作填空。因此,从2009年12月到2010年11月,一个大型bio-manipulation鱼笔银鲤的股票(H.molitrix)和自大鲤鱼(A.mobilis)内建于控制蓝藻Gehu湖,一个调查和实验室分析进行了比较水蚤类的群落结构的变异鱼钢笔以外的地区之间和地区B、D、C与不同比例的鱼(1∶4、1∶2,1∶1.5),结合讨论bio-manipulation的影响鱼笼对枝栖动物的影响及其对水体富营养化的改善作用。经鉴定,在鱼圈内外无种间差异的情况下,共采集到枝目动物7科14属32种,A区年平均密度和生物量均高于鱼圈内任何区域,与B区差异均显著(P0.05)。8月份,A区Moina sp密度与B区和D区差异显著,而鱼圈内3个区域无明显差异等,表明体积较大的Moina sp比其他2个小种更容易被鱼捕获。此外,还研究了水的一些特征参数,以描述枝海与环境变量的相关性。CCA(典型对应分析)表明,水温、高锰酸盐指数(CODMn)、硝态氮(NO3-N)和水透明度(SD)是影响枝藻群落结构的主要非生物因素。
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引用次数: 0
Feeding behavior of 5 species filter-feeding bivalves on Paralichthys olivaceus feed,fecal and sediment particulates in cage farming area 网箱养殖区5种滤食性双壳类对绿鳍副鱼饵料、粪便及沉积物颗粒的摄食行为
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38401
Ji-hong Zhang, Tao Wu, Ya-Jie Gao, W. Tang
5 species bivalves' feeding behavior on different food,including flounder(Paralichthys olivaceus)faeces,residul feed and deposition was studied so as to discuss the potential IMTA based on filter-feeding bivalves.Results showed the 5 species bivalves could feed on fish faeces,residul feed and deposition.However,different species showed different feeding behaviors.Ingestion rates of oyster,clam and scallop were significantly higher than the other 2 species(two-way ANOVA,P0.01),and absorption efficiency(AE)and absorption rate(AR)of the 5 species bivalves were not significantly different.Diet had significant influence on the feeding behavior.With particle organic matter(POM)increasing,AE increased.There were significantly linear relationship between AR and POM.TPM threshold for pseudo-feces production of oyster and scallop and was 26.24,21.64,27.00 mg/L,respectively,and the 5 species bivalves could regulate food intake by pseudo-feces production.The shellfish+fish IMTA mode,clam Ruditapes philippinarum,oyster Crassostrea gigas and scallop Chlamys farreri are relatively good candidate species.
研究了5种双壳类对不同食物(比目鱼粪便、残饲料和沉积物)的摄食行为,探讨了基于滤食性双壳类的IMTA潜力。结果表明,5种双壳类动物均以鱼粪、残饲料和沉积物为食。然而,不同的物种表现出不同的摄食行为。牡蛎、蛤蜊和扇贝的摄食率极显著高于其他2种(双因素方差分析,P0.01), 5种双壳类动物的吸收效率(AE)和吸收率(AR)差异不显著。日粮对摄食行为有显著影响。随着颗粒有机质(POM)的增加,声发射增大。AR与POM之间存在显著的线性关系。牡蛎和扇贝产假粪的TPM阈值分别为26.24、21.64、27.00 mg/L, 5种双壳类动物均可通过产假粪调节摄食。贝类+鱼类的IMTA模式、菲律宾蛤、牡蛎、长牡蛎和扇贝是相对较好的候选物种。
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引用次数: 6
Preparation and preliminary application of monoclonal antibodies against VP2 COE protein of infectious pancreatic necrosis virus 抗感染性胰腺坏死病毒VP2 COE蛋白单克隆抗体的制备及初步应用
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38420
K. Lian, Li-li Zhao, Linlin Zhang, P. Jia, Lijie Tang, Junwei Ge, L. Yijing, Min Liu
The recombinant protein IPNV VP2 was used as immunogen after purification by Ni-NTA.The 8-week-old BALB/c mice were intraperitoneally immunized with the VP2 protein for three times,then myeloma cells SP2/0 were fused with the spleen cells of the immunized BALB/c mice.Two hybridoma cell lines against the VP2 protein were obtained by screening with the indirect ELISA and limiting dilution assay,which were identified to be IgG1 subtype and named 5G10,5F3.The numbers of chromosomes of the two hybridomas were in the range of 75 to 120.Their antibody titers of cells culture supernatant were 1∶ 105,1∶ 102 respectively.Their titers of ascites were 1∶ 108,1∶ 104 respectively.Western-blot analysis and indirect immunofluorescence showed that the two McAbs could react with IPNV specificity.The 2 McAbs had no reactive capability with IHNV,VHSV,SVCV and HRV by the indirect ELISA.Antibodies additivity assay demonstrated that 5G10 and 5F3 recognized the different epitopes of IPNV VP2 nucleoprotein.We detected the clinical suffering from IPN rainbow trout liver tissue material,and the results confirmed that the 2 McAbs can be used for follow-up testing.
重组蛋白VP2经Ni-NTA纯化后作为免疫原。用VP2蛋白腹腔免疫8周龄BALB/c小鼠3次,将免疫后的骨髓瘤细胞SP2/0与BALB/c小鼠脾细胞融合。经间接ELISA和极限稀释法筛选,获得2株抗VP2蛋白的杂交瘤细胞株,鉴定为IgG1亚型,命名为5G10、5F3。两种杂交瘤的染色体数在75 ~ 120之间。细胞培养上清抗体滴度分别为1∶105、1∶102。腹水滴度分别为1∶108、1∶104。Western-blot和间接免疫荧光分析表明,这两种单克隆抗体对IPNV具有特异性反应。间接ELISA结果显示,2个单克隆抗体对IHNV、VHSV、SVCV和HRV无反应能力。抗体加性实验表明,5G10和5F3识别IPNV VP2核蛋白的不同表位。我们检测了临床患IPN的虹鳟鱼肝脏组织材料,结果证实2个单克隆抗体可用于后续检测。
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引用次数: 1
A preliminary study on the maternal transfer and bacteriostasis of a C-type lectin in scallop(Patinopecten yessoensis) 一种c型凝集素在扇贝(Patinopecten yessoensis)中的母体转移及抑菌作用的初步研究
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38464
Biao Wu, Chang Chi, A. Yang, Shicui Zhang, Zhihong Liu, Liqing Zhou
Maternal transfer of immune factors from mother to eggs has been reported in many aquatic species,and these factors played important immune roles in developing embryos and larvae.However,the study on maternal immunity of shellfish remains lacking.In this study,maternal transfer and bacteriostasis of a C-type lectin in scallop(Patinopecten yessoensis)were analyzed.We detected the mRNA expression pattern of the C-type lectin gene in ovary and early developing larvae using the real-time quantitative PCR method,and tested the antibacterial activity of maternal C-type lectin in eggs by colony-forming unit(CFU)assay.The results of qRT-PCR showed that the expression of C-type lectin gene in ovary after bacterial challenge was time-dependent,and it was up-regulated gradually from 2 h after injection of bacteria and reached the peak at 8 h which was 6.2 times compared to the control group,and then dropped progressively to the original level.On the other hand,the fact that mRNA was found both in the eggs and larvae indicated that it could be transferred from mother to offspring.The mRNA expression in bacterial challenge group was significantly higher than those in normal group except for the 36 h point.The CFU assay revealed that the cytoplasm of eggs with protein concentration of 200 μg/mL and 400 μg/mL had lethal effect on the bacteria Vibrio anguillarum,and the function weakened significantly once the antibody of C-type lectin was added,which indicated the C-type lectin from mother had antibacterial activity.It is concluded that the maternal C-type lectin can transfer from mother to the offspring and has antibacterial activity.
据报道,在许多水生物种中,母体将免疫因子转移到卵中,这些因子在胚胎和幼虫的发育中起着重要的免疫作用。然而,对贝类母体免疫的研究仍然缺乏。本研究分析了一种c型凝集素在扇贝(Patinopecten yessoensis)中的母体转移和抑菌作用。采用实时定量PCR方法检测c型凝集素基因在卵巢和早期发育幼虫中的mRNA表达谱,并采用菌落形成单位(colony forming unit, CFU)法检测母体c型凝集素在卵中的抑菌活性。qRT-PCR结果显示,细菌攻毒后卵巢c型凝集素基因的表达具有时间依赖性,从注射细菌后2 h开始逐渐上调,8 h达到峰值,为对照组的6.2倍,之后逐渐回落至初始水平。另一方面,在卵和幼虫中都发现了mRNA,这表明它可以从母亲转移到后代。除36 h点外,细菌攻毒组mRNA表达量均显著高于正常组。CFU实验结果表明,蛋白浓度为200 μg/mL和400 μg/mL的卵细胞质对鳗弧菌均有致死作用,且加入c型凝集素抗体后作用明显减弱,说明母体c型凝集素具有抑菌活性。由此可见,母体c型凝集素可从母体传给子代,并具有抗菌活性。
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引用次数: 0
缺刻缘绿藻二酰甘油酰基转移酶2(DGAT2)的基因特性与功能鉴定 缺刻缘绿藻二酰甘油酰基转移酶2(DGAT2)的基因特性与功能鉴定
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38654
房逢立, 吴洪, 周志刚
Acyl-CoA:diacylglycerol acyltransferase(DGAT;EC 2.3.1.20)is regarded as a key enzyme in triacylglycerol(TAG)biosynthesis of microalgae and other plants.In order to understand the biosynthesis of TAG in Myrmecia incisa,we found a putative full-length DGAT2 cDNA sequence in the homology search of a pyrosequencing transcriptome of this microalga.The full-length cDNA sequence was composed of 1 997 bp.It comprised a 44-bp 5′-untranslated region(UTR),a 897-bp 3′-UTR with a typical poly A tail,and a 1 056 bp open reading frame(ORF)encoding a 351-amino-acid protein with a putative molecular weight of 39.43 ku and pI at 9.46.Neighbor-Joining(NJ)phylogenetic tree inferred from the putative proteins of DGAT genes indicated that this gene belongs to DGAT2 gene family,significantly different from DGAT1 and DGAT3 families.Multiple sequence alignment of amino acids indicated that a conserved and characteristic sequence HPHG of the DGAT2's was present in this gene.Therefore,this gene was designated as MiDGAT2.Compared with the DNA sequence of MiDGAT2,it was found that its coding region was interrupted by 6 introns with all splicing sites well matching the GT-AG rule.In order to investigate the function of MiDGAT2,its open reading frame was amplified by RT-PCR and sub-cloned into the shuttle vector pYES2 to generate the recombinant vector pY-MiDGAT2.This recombinant plasmid was transformed into a TAG-defective mutant H1246 of Saccharomyces cerevisiae for expression by electroporation.The target gene integrated in the yeast genome was confirmed by sequencing and a transformant with pY-MiDGAT2 was screened out.This yeast transformant was cultured in SC medium with galactose as an inducer.Thin layer chromatogram(TLC)analysis of yeast lipids showed that the TAG-defective mutant H1246 transformed with MiDGAT2 could restore the ability to synthesize TAG,indicating that MiDGAT2 encodes a DGAT enzyme involved in the biosynthesis of TAG.When the yeast cells were stained with fluorescent dye Bodipy,it was found that lipid droplets were present in the TAG-defective mutant H1246 transformed with MiDGAT2,although the diameter of lipid droplets was smaller than that of wild type.
酰基辅酶a:二酰基甘油酰基转移酶(diacylglycerol acyltransferase, DGAT;EC 2.3.1.20)是微藻等植物三酰基甘油(triacylglycerol, TAG)生物合成的关键酶。为了进一步了解切丝桃金娘(Myrmecia incisa)中TAG的生物合成过程,我们对切丝桃金娘(Myrmecia incisa)的焦磷酸测序转录组进行同源性搜索,发现了一个推测的DGAT2全长cDNA序列。全长cDNA序列为1 997 bp。它由一个44-bp的5 ' -未翻译区(UTR)、一个897-bp的典型聚a尾3 ' -未翻译区(UTR)和一个1 056 bp的开放阅读框(ORF)组成,编码一个351个氨基酸的蛋白,推测分子量为39.43 ku, pI为9.46。根据DGAT基因推定蛋白的邻居连接(NJ)系统发育树推断该基因属于DGAT2基因家族,与DGAT1和DGAT3家族有显著差异。多个氨基酸序列比对表明,该基因具有DGAT2的保守特征序列HPHG。因此,该基因被命名为MiDGAT2。与MiDGAT2的DNA序列比较,发现其编码区被6个内含子打断,所有剪接位点均符合GT-AG规则。为了研究MiDGAT2的功能,通过RT-PCR扩增其开放阅读框,并将其亚克隆到穿梭载体pYES2中,生成重组载体pY-MiDGAT2。将该重组质粒转化为酿酒酵母(Saccharomyces cerevisiae)的tag缺陷突变体H1246,通过电穿孔法表达。通过测序确认了整合到酵母基因组中的目的基因,并筛选出带有pY-MiDGAT2的转化体。以半乳糖为诱导剂,在SC培养基中进行酵母转化培养。酵母脂质薄层色谱(TLC)分析表明,经MiDGAT2转化的TAG缺陷突变体H1246可以恢复TAG合成能力,这表明MiDGAT2编码一种DGAT酶参与TAG的生物合成。用荧光染料Bodipy对酵母细胞进行染色,发现经MiDGAT2转化的tag缺陷突变体H1246中存在脂滴,尽管脂滴直径比野生型小。
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引用次数: 0
Intestinal microbiota changes of grass carp(Ctenopharyngodon idellus)in different months 草鱼(Ctenopharyngodon idellus)不同月份肠道菌群变化
Q4 Environmental Science Pub Date : 2013-01-01 DOI: 10.3724/SP.J.1231.2013.38740
J. Ni, Yuhe Yu
In order to assess the changes of the intestinal microbial community after the feeding conversion of grass carp(Ctenopharyngodon idellus),we analyzed the intestinal microbial communities of grass carp by PCR-DGGE. The results indicated that there were significant differences among the intestinal microbial communities from the grass carps caught in different months. However,the sample size and fullness were not detected to have significant correlation with the intestinal microbial community,which were generally recognized as the factors influencing the intestinal microbial community. These results implied that environmental difference probably is the most important factor influencing the intestinal microbial community in a short-term. Our results will provide the basic information to elucidate the change rule of intestinal microbial community of grass carp,and the action mechanism of the intestinal probiotics,the relationship between intestinal microbes and the fish diseases.
为了评估草鱼(Ctenopharyngodon idellus)摄食转化后肠道微生物群落的变化,采用PCR-DGGE对草鱼肠道微生物群落进行了分析。结果表明,不同月份捕获的草鱼肠道微生物群落存在显著差异。然而,样本大小和饱足度与肠道微生物群落没有显著的相关性,而这两个因素通常被认为是影响肠道微生物群落的因素。这些结果表明,短期内环境差异可能是影响肠道微生物群落的最重要因素。本研究结果将为阐明草鱼肠道微生物群落的变化规律、肠道益生菌的作用机制、肠道微生物与鱼类疾病的关系等提供基础信息。
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引用次数: 3
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