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In-Silico detection of chokepoints enzymes in four plasmodium species 四种疟原虫呛点酶的计算机检测
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I3.48503
S. Fatumo, Cs Yah
Of the over 156 species of Plasmodium that infect vertebrates, only four infect man: Plasmodium falciparum, Plasmodium vivax, Plasmodium ovale and Plasmodium malariae. Other species infect other animals including birds, reptiles and rodents. The rodent malaria parasites are Plasmodium berghei, Plasmodium yoelii, Plasmodium chabaudi and Plasmodium vinckei. Since research has shown a high similarity in sequence and properties between human and rodent, we sought to study the likely similar enzymatic pathways between the parasites that infect these two organisms that may be used as drug targets. The paper therefore, employed a computational biochemical approach to identify some choke points in the four selected species of Plasmodium: two (2) that infect humans and two (2) that infect rodents. These include- P. falciparum, P. vivax, P. berghei and P. chanbaudi respectively. In general, we identified an average of 178 chokepoint enzymes in these Plasmodium species which were common to all of them. Since there were several chokepoints enzymes common to all the species; we hypothesize that the chokepoints which are only common to a particular species could be possible drug targets to the individual parasites.
在感染脊椎动物的超过156种疟原虫中,只有4种会感染人类:恶性疟原虫、间日疟原虫、卵形疟原虫和疟疾疟原虫。其他物种会感染其他动物,包括鸟类、爬行动物和啮齿动物。啮齿动物的疟疾寄生虫有伯氏疟原虫、约氏疟原虫、沙氏疟原虫和长春疟原虫。由于研究表明人类和啮齿动物在序列和特性上高度相似,我们试图研究感染这两种生物的寄生虫之间可能相似的酶促途径,这些酶促途径可能用作药物靶点。因此,本文采用计算生化方法来确定四种选定的疟原虫的一些瓶颈:两种感染人类,两种感染啮齿动物。它们分别包括恶性疟原虫、间日疟原虫、伯氏疟原虫和昌伯氏疟原虫。总的来说,我们在这些疟原虫物种中平均鉴定出178种共同的瓶颈酶。由于存在一些所有物种共有的瓶颈酶;我们假设仅在特定物种中常见的阻塞点可能是单个寄生虫的可能药物靶点。
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引用次数: 4
Compararive osmotic fragility of erythrocyte genotypes (HBAA, HBAS and HBSS) of male subjects administered antimalarial drugs 服用抗疟药物的男性受试者红细胞基因型(HBAA、HBAS和HBSS)的渗透脆弱性比较
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I3.48507
PAUL CHIDOKA CHIKEZIE, A. Uwakwe, C. Monago
In vivo study was carried out to ascertain the mean corpuscular fragility (MCF) index and corresponding stability of three erythrocyte genotypes (HbAA, HbAS and HbSS) in male volunteers, before (control; t=0 hour) and after (tests; i.e. at t=3, 6 and 18 hours) of administration of five (5) antimalarial drugs (FansidarTM, HalfanTM, quinine, CoartemTM, and chloroquine phosphate). Clinically confirmed healthy non-malarious and malarious male subjects/volunteers enrolled for this study. Erythrocytes obtained from these individuals were suspended in two separate sets of phosphate buffer saline (PBS) solutions of decreasing concentrations in the following order: 0.9, 0.7, 0.6, 0.4, 0.3 and 0.2 g/100 ml. Spectrophotometric method was used to determine the level of erythrocyte osmotic fragility. The mean (± S.D) MCF values of the three genotypes were in the order: HbAA there was no significant difference (p>0.05) between the MCF values of HbAA and HbAS erythrocytes. Comparatively, parasitized erythrocytes exhibited significantly (p redox equilibrium of the red cells are agents of membrane  destabilization.
通过体内研究,确定男性志愿者三种红细胞基因型(HbAA、HbAS和HbSS)在对照前的平均红细胞脆性(MCF)指数和相应的稳定性;T =0小时)和之后(试验;即在t= 3,6和18小时)服用五(5)种抗疟药物(FansidarTM、HalfanTM、奎宁、CoartemTM和磷酸氯喹)。临床确认的健康非疟疾和疟疾男性受试者/志愿者参加了这项研究。将这些人的红细胞分别悬浮在两组浓度递减的磷酸缓冲盐水(PBS)溶液中,浓度依次为:0.9、0.7、0.6、0.4、0.3和0.2 g/100 ml。用分光光度法测定红细胞渗透脆性水平。三种基因型的平均(±S.D) MCF值依次为:HbAA。HbAA与HbAS红细胞的MCF值无显著差异(p < 0.05)。相比之下,寄生红细胞表现出明显的氧化还原平衡,红细胞是膜不稳定的因素。
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引用次数: 0
The chemistry and biology of the anticancer agent, taxol: A review 抗癌剂紫杉醇的化学和生物学研究进展
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I3.48549
K. Pandey, E. Ibezim
Taxol, is conceivably the single most essential anticancer drug, today. It was first isolated in exceptionally low yield from the bark of the Western Yew, Taxus brevifolia. The clinical effectiveness of Taxol has impelled an incredible endeavor to obtain this intricate molecule synthetically. Owing to the chemical complication of Taxol, its commercial manufacture by total synthesis is not likely to be economical. The chemical and biological properties, along with mechanism of action of Taxol are discussed here.
可以想象,紫杉醇是当今最重要的抗癌药物。它最初是从西部红豆杉(Taxus brevifolia)的树皮中极低产量分离出来的。紫杉醇的临床疗效促使人们做出了难以置信的努力来合成这种复杂的分子。由于紫杉醇的化学性质复杂,采用全合成法生产紫杉醇不太经济。本文讨论了紫杉醇的化学、生物学特性及其作用机理。
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引用次数: 3
Computer - based modeling in extract sciences research -I. Chemical Sciences 提取科学研究中的计算机建模[j]。化学科学
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I3.48512
E. Ibezim, P. Duchowicz, N. Ibezim, M. Sanservino, E. Castro
Modeling has come of age as a research tool in the basic sciences, especially the exact sciences. Specifically, in the discipline of chemistry, it has been of great utility. Its use dates back to the 17th Century and includes such wide areas as computational chemistry, chemoinformatics, molecular mechanics, chemical dynamics, molecular dynamics, molecular graphics and algorithms. Modeling has been employed extensively in discovering newer chemical compounds and in explaining some chemical properties hitherto unexplained by laboratory experimental procedures. In modeling, some ways of determining the total energy to predict molecular structures include the ab initio method, density functional method and the semi-empirical/empirical methods. Several computer softwares have been employed in chemistrybased modeling including the HUMO-LUMO, ATMOL, GAUSSIAN, IBMOL, and POLYAYTOM,
在基础科学,尤其是精确科学中,建模已经成为一种成熟的研究工具。具体地说,在化学学科中,它有很大的用处。它的使用可以追溯到17世纪,包括计算化学、化学信息学、分子力学、化学动力学、分子动力学、分子图形学和算法等广泛领域。建模已广泛应用于发现新的化合物和解释迄今为止无法通过实验室实验程序解释的一些化学性质。在建模中,确定总能量以预测分子结构的方法包括从头算法、密度泛函法和半经验/经验方法。几种计算机软件已被用于基于化学的建模,包括HUMO-LUMO, ATMOL, GAUSSIAN, IBMOL和POLYAYTOM。
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引用次数: 0
Erythrocyte glutathione S-Transferase activity in human administered with five antimalarial drugs 五种抗疟疾药物对人红细胞谷胱甘肽s -转移酶活性的影响
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I3.48543
PAUL CHIDOKA CHIKEZIE, A. Uwakwe, C. Monago
In vivo investigation to ascertain the capacities of five antimalarials drugs (Fansidar, Halfan, quinine, Coartem and chloroquine phosphate) to alter/distort non-parasitized human erythrocyte (HbAA genotype) glutathione S-transferase (GST) activity was carried out. Apparent healthy and clinically confirmed non-malarious male volunteers enrolled for this study. The incubation of human erythrocytes with 1-chloro-2,4-dinitrobenzene (CDNB) resulted in almost quantitative conjugation of glutathione (GSH) to form S-(2,4-dinitrophenyl) glutathione. The reaction formed the basis for the spectrophotometric determination of GST activity. Determination of GST activity was carried out before (control; t=0 hour) and after (tests; i.e. at t=3, 6 and 18 hours) the five (5) antimalarial drugs were administered to the human volunteers. The control/reference values ranged between 3.27±0.13 and 3.40±0.05 )iu/gHb. Generally, the pattern of in vivo erythrocyte GST activity with time in the presence of the five antimalarial drugs showed a two-phase profile. The first stage showed decreasing levels of relative GST activity within approximate time range: (6
研究了5种抗疟药物(Fansidar、Halfan、奎宁、复方蒿甲醚和磷酸氯喹)改变/扭曲非寄生人红细胞(HbAA基因型)谷胱甘肽s转移酶(GST)活性的能力。本研究招募了表面健康且临床证实未患疟疾的男性志愿者。人红细胞与1-氯-2,4-二硝基苯(CDNB)孵育后,谷胱甘肽(GSH)几乎定量偶联,形成S-(2,4-二硝基苯)谷胱甘肽。该反应形成了分光光度法测定GST活性的基础。GST活性测定在(对照;T =0小时)和之后(试验;即在t= 3,6和18小时时,给人类志愿者服用五(5)种抗疟疾药物。对照/参考值范围为3.27±0.13 ~ 3.40±0.05)iu/gHb。一般来说,体内红细胞GST活性随时间的模式在五种抗疟疾药物的存在下表现为两阶段的概况。第一阶段显示在大约的时间范围内相对商品及服务税活动水平下降
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引用次数: 1
A critical analysis of the prospects and constraints to commercialization of indigenous pharmaceutical research and developments outputs in developing countries 对发展中国家本土药物研究和开发成果商业化的前景和制约因素的批判性分析
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I3.48513
G. Adepoju, A. Akinbowale
It is the inalienable right of the pharmaceutical industry to continue to create medical breakthroughs in order to improve the quality and availability of essential drugs, equipment and consumables in order to impact on morbidity and mortality rates associated with emerging and re-emerging diseases. This study aims at evaluating the prospects and constraints that the pharmaceutical industry in Nigeria faces in Research and Development (R&D) and its commercialization and how these could be overcome. Questionnaire was used as the data collection instrument using stratified sampling procedure. Findings show that the industry faces a lot of constraints due to economic, regulatory and scientific factors that have fundamentally changed the environment in which it operates. The changing focus of drug discovery and development, rising R & D expenditure, cost management, complexity of R & D (e.g. biotechnologies), lengthy period of R & D till commercialization among others, are disincentives to innovations and commercialization of the output of R & D. Thus, translation of the output of pharmaceutical R & D in developing countries like Nigeria is still low just as the prospect for commercialization and innovative skills remain low. The study recommends appropriate intervention strategies to overcome the militating factors so that the industry can grow and enhance the multiplier effect of improved quality of life benefits.
制药工业有不可剥夺的权利继续创造医疗突破,以改善基本药品、设备和消耗品的质量和供应,从而降低与新出现和再出现的疾病有关的发病率和死亡率。这项研究的目的是评估尼日利亚制药业在研发(R&D)及其商业化方面面临的前景和限制,以及如何克服这些限制。采用分层抽样方法,采用问卷调查作为数据收集工具。调查结果显示,由于经济、监管和科学因素,该行业面临着许多限制,这些因素从根本上改变了其运营环境。不断变化的药物发现和开发,重点研发支出上升,成本管理,R & D的复杂性(如生物技术),长期的R & D到商业化等,约束输出的创新和商业化的R & D .因此,翻译的输出制药R & D在尼日利亚这样的发展中国家仍然很低的商业化前景和创新技能仍然很低。研究建议适当的干预策略,以克服影响因素,使该行业得以发展,并提高生活质量效益的乘数效应。
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引用次数: 0
Evaluation of lozenges formulated from the root bark extract of ZinthoxylumTessmannii 用紫皮提取物配制含片的评价
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I4.48559
O. Okorie, C. Esimone, I. Nzekwe, S. Okoli
Following claims of the use of the root bark of Zanthoxylum tessmannii in remedies for mouth and throat infections, particularly tonsillitis and oral thrush, it became necessary to examine the possibility of formulating the extract into lozenges. The root bark was extracted with methanol and the phytochemical composition of the extract evaluated using standard methods. Preliminary phytochemical tests were carried out on the extract, which was then tested for activity against Candida albicans and Staphylococcus aureus, using nystatin and ampicillin/cloxacillin as control standards respectively. The extract was formulated into lozenges by dry granulation followed by compression in a tableting machine. The compressed lozenges were evaluated for friability, thickness and diameter, weight uniformity and content of active ingredient. The tests revealed heavy presence of alkaloids, flavonoids, terpenoids, oils, carbohydrates and a trace quantity of reducing sugars, tannins and steroids. The extract showed significant activity against Candida albicans in comparison with nystatin, but not against Staphylococcus aureus. The lozenges were of uniform thickness and diameter, and also conformed to the official requirements for uniformity of weight and content of active ingredient for such preparations. We conclude that the bark of the roots of Zanthoxylum tessmannii can be formulated into lozenges for oral thrush in paediatric and geriatric patients.
在声称使用花椒根树皮治疗口腔和咽喉感染,特别是扁桃体炎和鹅口疮之后,有必要研究将提取物配制成含片的可能性。用甲醇提取其根皮,用标准方法评价其植物化学成分。对提取物进行了初步的植物化学测试,然后分别以制霉菌素和氨苄西林/氯西林作为对照标准,测试其对白色念珠菌和金黄色葡萄球菌的活性。该提取物通过干燥造粒,然后在压片机中压缩制成含片。对所制压缩含片的脆度、厚度和直径、重量均匀性和有效成分含量进行了评价。测试显示大量的生物碱、类黄酮、萜类、油、碳水化合物和微量的还原糖、单宁和类固醇。与制霉菌素相比,提取物对白色念珠菌有明显的抑制作用,但对金黄色葡萄球菌没有明显的抑制作用。所制含片的厚度和直径均匀,也符合官方对这类制剂的重量均匀性和有效成分含量的要求。我们的结论是,花椒根的树皮可以配制成含片为儿童和老年患者口疮。
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引用次数: 1
Computer - based modeling in extract sciences research -III. Biological and related sciences 萃取科学研究中的计算机建模- 3。生物及相关科学
Pub Date : 2009-12-02 DOI: 10.4314/jophas.v6i4.48556
E. Ibezim, P. Duchowicz, N. Ibezim, C. Njoku, Sa Brown, O. Okorie, M. Sanservino, E. Castro
The use of molecular modeling in exact science based researches has come a long way. Our earlier paper focused on its use in chemistry and physics disciplines. Molecular modeling techniques have been of great applicability in the study of the biological sciences and other exact science fields like agriculture, mathematics, computer science and the like. In this write up, a list of computer programs for predicting, for instance, the structure of proteins has been provided. Discussions on different types of models, structural bioinformatics, Monte Carlos methods and their applications in finance and business, telecommunications, physical sciences, designs and visuals, games and methematics bioinformatics are presented. Some recent applications of molecular modeling in biological, agricultural and mathematical researches are presented.
分子模型在精确科学研究中的应用已经取得了长足的进步。我们之前的论文关注的是它在化学和物理学科中的应用。分子建模技术在生物科学和其他精确科学领域,如农业、数学、计算机科学等的研究中具有很大的适用性。在这篇文章中,提供了一系列用于预测的计算机程序,例如蛋白质的结构。讨论了不同类型的模型、结构生物信息学、蒙特卡罗方法及其在金融和商业、电信、物理科学、设计和视觉、游戏和数学生物信息学中的应用。介绍了分子模拟在生物学、农业和数学研究中的最新应用。
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引用次数: 0
Linear computational QSPR for property elucidation and new chemical synthesis 性质解析和新化学合成的线性计算QSPR
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I4.48560
E. Ibezim, P. Duchowicz, N. Ibezim, E. Castro
QSPR constitutes one of the major areas within computational chemistry and refers to the process of correlating chemical structure of compounds with their physicochemical properties. To achieve this, it employs a wide range of computational programmes and computer softwares including DRAGON, MATLAB, HYPERCHEM and RECKON. Experimental data are first generated from which models or equations are derived that now help to predict the properties of known or unknown compounds whose properties are hitherto unknown. It is a very useful tool in the search for new compounds with improved physicochemical properties like melting point, boiling point, free energy, activation energy, partition coefficient, diffusion coefficient and the like.
QSPR是计算化学的主要领域之一,是指将化合物的化学结构与其物理化学性质相关联的过程。为了实现这一目标,它采用了广泛的计算程序和计算机软件,包括DRAGON, MATLAB, HYPERCHEM和RECKON。首先产生实验数据,然后推导出模型或方程,这些模型或方程现在有助于预测性质迄今未知的已知或未知化合物的性质。它是一个非常有用的工具,在寻找新的物理化学性质,如熔点,沸点,自由能,活化能,分配系数,扩散系数等改进的新化合物。
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引用次数: 0
A study of the histaminic activity of extract of Mucuna pruriens 麻豆提取物组胺活性的研究
Pub Date : 2009-12-02 DOI: 10.4314/JOPHAS.V6I4.48558
U. Georgewill, O. Georgewill, R. Nwankwoala
This study investigated the pharmacological activity of the principle from the spines of the seed pods of Mucuna pruriens using contraction of guinea pig ileum as index of pharmacological activity. The active principle was extracted with 0.0015 M NaCl. Muscle strips of guinea pig ileum were prepared and contractile responses were measured using a Kymograph. Two sets of experiments were conducted viz: the contraction of the ileum in the presence of different concentrations of histamine, 2 – methylhistamine and the extract of Mucuna pruriens and the contractile response of the ileum in the presence of different concentrations of the extract and antagonists – diphenhydramine, atropine and methysergide. Mucuna pruriens extract, 2 – methylhistamine and histamine produced dose dependent contraction of guinea pig ileum (Extract ED50 = 13.0 ig/ml; 2 – methylhistamine ED=50-8.5 ig/ml and Histamine ED50=10 ig/ml). Diphenhydramine, an H1 antagonist competitively blocked the contractile response of the extract and coadministration of the extract either with different doses of antimuscarinic agent atropine or 5 – hydroxytryptamine blocking agent, methysergide did not alter the extract - induced contractile response of the guinea pig ileum. These results demonstrate that the spines of Mucuna pruriens possess histamine activity which may contribute to its itching and painful irritation effects.
本研究以豚鼠回肠收缩为指标,从麻豆种子荚棘中研究麻豆的药理活性。用0.0015 M NaCl提取有效成分。制备豚鼠回肠肌条,用心电图仪测定其收缩反应。进行了两组实验,分别是不同浓度组胺、2 -甲基组胺和麻豆提取物对回肠收缩的影响,以及不同浓度的麻豆提取物和拮抗剂苯海拉明、阿托品和甲基塞吉特对回肠收缩的影响。麻豆提取物、2 -甲基组胺和组胺致豚鼠回肠剂量依赖性收缩(提取物ED50 = 13.0 ig/ml;2 -甲基组胺ED=50 ~ 8.5 ig/ml,组胺ED50=10 ig/ml)。苯海拉明是一种H1拮抗剂,可竞争性地阻断提取物的收缩反应,并且与不同剂量的抗毒蕈碱剂阿托品或5 -羟色胺阻滞剂共同给药,甲基塞吉特不会改变提取物诱导的豚鼠回肠收缩反应。这些结果表明,麻豆的刺具有组胺活性,可能有助于其瘙痒和疼痛的刺激作用。
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引用次数: 0
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Journal of Pharmaceutical and Allied Sciences
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