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Multiscale modeling of metal-hydride interphases—quantification of decoupled chemo-mechanical energies 金属氢化物相间的多尺度建模--解耦化学机械能的量化
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-24 DOI: 10.1038/s41524-024-01424-1
Ebert Alvares, Kai Sellschopp, Bo Wang, ShinYoung Kang, Thomas Klassen, Brandon C. Wood, Tae Wook Heo, Paul Jerabek, Claudio Pistidda

The quantification of interphase properties between metals and their corresponding hydrides is crucial for modeling the thermodynamics and kinetics of the hydrogenation processes in solid-state hydrogen storage materials. In particular, interphase boundary energies assume a pivotal role in determining the kinetics of nucleation, growth, and coarsening of hydrides, alongside accompanying morphological evolution during hydrogenation. The total interphase energy arises from both chemical bonding and mechanical strains in these solid-state systems. Since these contributions are usually coupled, it is challenging to distinguish via conventional computational approaches. Here, a comprehensive atomistic modeling methodology is developed to decouple chemical and mechanical energy contributions using first-principles calculations, of which feasibility is demonstrated by quantifying chemical and elastic strain energies of key interfaces within the FeTi metal-hydride system. Derived materials parameters are then employed for mesoscopic micromechanical analysis, predicting crystallographic orientations in line with experimental observations. The multiscale approach outlined verifies the importance of the chemo-mechanical interplay in the morphological evolution of growing hydride phases, and can be generalized to investigate other systems. In addition, it can streamline the design of atomistic models for the quantitative evaluation of interphase properties between dissimilar phases and allow for efficient predictions of their preferred phase boundary orientations.

金属及其相应氢化物之间相间特性的量化对于固态储氢材料氢化过程的热力学和动力学建模至关重要。特别是,相间边界能量在决定氢化物的成核、生长和粗化动力学以及氢化过程中伴随的形态演变方面起着关键作用。相间总能量来自这些固态体系中的化学键和机械应变。由于这些贡献通常是耦合的,因此通过传统的计算方法来区分它们是很有挑战性的。本文开发了一种全面的原子建模方法,利用第一原理计算将化学能和机械能的贡献解耦,并通过量化铁钛金属氢化物体系中关键界面的化学能和弹性应变能,证明了这种方法的可行性。然后将推导出的材料参数用于介观微观力学分析,根据实验观察结果预测晶体学取向。所概述的多尺度方法验证了化学-机械相互作用在氢化物生长相形态演变中的重要性,并可推广用于研究其他体系。此外,它还能简化原子模型的设计,从而对不同相之间的相间特性进行定量评估,并有效预测它们的首选相界取向。
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引用次数: 0
Convolutional network learning of self-consistent electron density via grid-projected atomic fingerprints 通过网格投影原子指纹的卷积网络学习自洽电子密度
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-24 DOI: 10.1038/s41524-024-01433-0
Ryong-Gyu Lee, Yong-Hoon Kim

The self-consistent field (SCF) generation of the three-dimensional (3D) electron density distribution (ρ) represents a fundamental aspect of density functional theory (DFT) and related first-principles calculations, and how one can shorten or bypass the SCF loop represents a critical question in electronic structure theory from both practical and fundamental standpoints. Herein, a machine learning strategy, DeepSCF, is presented in which the map between the SCF ρ and the initial guess density (ρ0) constructed by the summation of neutral atomic densities is learned using 3D convolutional neural networks (CNNs). High accuracy and transferability of DeepSCF are achieved by first encoding ρ0 on a 3D grid and then expanding the input features to include atomic fingerprints beyond ρ0. The prediction of the residual density (δρ) rather than ρ itself is targeted, and given that δρ is indicative of chemical bonding information, a dataset of small-sized organic molecules featuring diverse bonding characters is adopted. The fidelity of DeepSCF is finally enhanced by subjecting the atomic geometries of the dataset to random rotations and strains. The effectiveness of DeepSCF is demonstrated using a complex carbon nanotube-based DNA sequencer model. This work evidences that the nearsightedness in electronic structure can be optimally represented via the spatial locality in CNNs, offering insight into the success of various machine learning-based atomistic materials simulations.

三维(3D)电子密度分布(ρ)的自洽场(SCF)生成是密度泛函理论(DFT)和相关第一性原理计算的一个基本方面,如何缩短或绕过SCF环路是电子结构理论从实践和基础两个角度提出的一个关键问题。本文提出了一种机器学习策略--DeepSCF,利用三维卷积神经网络(CNN)学习 SCF ρ 与通过中性原子密度求和构建的初始猜测密度(ρ0)之间的映射。首先在三维网格上对ρ0进行编码,然后将输入特征扩展到ρ0以外的原子指纹,从而实现了DeepSCF的高精度和可移植性。我们的目标是预测残余密度(δρ)而不是ρ本身,鉴于δρ是化学键信息的指标,我们采用了具有不同键合特征的小尺寸有机分子数据集。通过对数据集的原子几何结构进行随机旋转和应变,最终提高了 DeepSCF 的保真度。DeepSCF 的有效性通过一个复杂的基于碳纳米管的 DNA 测序仪模型得到了验证。这项研究证明,电子结构的近视性可以通过 CNN 的空间定位得到最佳表现,从而为各种基于机器学习的原子材料模拟的成功提供了启示。
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引用次数: 0
Enhanced spin Hall ratio in two-dimensional semiconductors 二维半导体中的增强自旋霍尔比
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-23 DOI: 10.1038/s41524-024-01434-z
Jiaqi Zhou, Samuel Poncé, Jean-Christophe Charlier

The conversion efficiency from charge current to spin current via the spin Hall effect is evaluated by the spin Hall ratio (SHR). Through state-of-the-art ab initio calculations involving both charge conductivity and spin Hall conductivity, we report the SHRs of the III-V monolayer family, revealing an ultrahigh ratio of 0.58 in the hole-doped GaAs monolayer. In order to find more promising 2D materials, a descriptor for high SHR is proposed and applied to a high-throughput database, which provides the fully relativistic band structures and Wannier Hamiltonians of 216 exfoliable monolayer semiconductors and has been released to the community. Among potential candidates for high SHR, the MXene monolayer Sc2CCl2 is identified with the proposed descriptor and confirmed by computation, demonstrating the descriptor validity for high SHR materials discovery.

通过自旋霍尔效应从电荷电流到自旋电流的转换效率是通过自旋霍尔比(SHR)来评估的。通过涉及电荷电导率和自旋霍尔电导率的最先进的 ab initio 计算,我们报告了 III-V 单层系列的 SHR,发现掺杂空穴的砷化镓单层具有 0.58 的超高比值。为了找到更多有前途的二维材料,我们提出了高SHR的描述符,并将其应用于高通量数据库,该数据库提供了216种可剥离单层半导体的完全相对论能带结构和万尼尔哈密顿,并已向社会发布。在潜在的高SHR候选材料中,MXene单层Sc2CCl2被提出的描述符识别出来,并通过计算得到证实,证明了描述符在发现高SHR材料方面的有效性。
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引用次数: 0
Active learning accelerated exploration of single-atom local environments in multimetallic systems for oxygen electrocatalysis 主动学习加速探索氧电催化多金属体系中的单原子局部环境
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-19 DOI: 10.1038/s41524-024-01432-1
Hoje Chun, Jaclyn R. Lunger, Jeung Ku Kang, Rafael Gómez-Bombarelli, Byungchan Han

Single-atom catalysts (SACs) with multiple active sites exhibit high activity for a wide range of sluggish reactions, but identifying optimal multimetallic SAC is challenging due to the vast design space. Here, we present a self-driving computational strategy that combines first-principles calculations and equivariant graph neural network (GNN) to explore over 30,000 binary metallic sites with varying combinations of 3d transition metals and different ligand environments for oxygen reduction and evolution reactions (ORR/OER). Active learning facilitates the investigation of the search space by balancing the exploration of unseen atomic structures with the exploitation of the active ones. The GNN learns the chemical environments to capture composition-structure-property relationships for ORR/OER activity and selectivity. The computational predictions of promising Co-Fe, Co-Co, and Co-Zn metal pairs are consistent with the state-of-the-art results of experimental measurements reported in the literature. This approach can be extended to a broader class of multi-element high entropic materials systems.

具有多个活性位点的单原子催化剂(SAC)在多种迟缓反应中表现出很高的活性,但由于设计空间巨大,确定最佳的多金属 SAC 具有挑战性。在此,我们提出了一种自驱动计算策略,该策略结合了第一性原理计算和等变图神经网络(GNN),探索了 30,000 多个具有不同 3d 过渡金属组合和不同配体环境的二元金属位点,用于氧还原和进化反应(ORR/OER)。主动学习通过平衡对未知原子结构的探索和对活跃原子结构的利用,促进了对搜索空间的研究。GNN 通过学习化学环境来捕捉 ORR/OER 活性和选择性的组成-结构-属性关系。对有前途的 Co-Fe、Co-Co 和 Co-Zn 金属对的计算预测与文献中报道的最新实验测量结果一致。这种方法可以扩展到更广泛的多元素高熵材料系统。
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引用次数: 0
MD-HIT: Machine learning for material property prediction with dataset redundancy control MD-HIT:通过数据集冗余控制进行材料特性预测的机器学习
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-18 DOI: 10.1038/s41524-024-01426-z
Qin Li, Nihang Fu, Sadman Sadeed Omee, Jianjun Hu

Materials datasets usually contain many redundant (highly similar) materials due to the tinkering approach historically used in material design. This redundancy skews the performance evaluation of machine learning (ML) models when using random splitting, leading to overestimated predictive performance and poor performance on out-of-distribution samples. This issue is well-known in bioinformatics for protein function prediction, where tools like CD-HIT are used to reduce redundancy by ensuring sequence similarity among samples greater than a given threshold. In this paper, we survey the overestimated ML performance in materials science for material property prediction and propose MD-HIT, a redundancy reduction algorithm for material datasets. Applying MD-HIT to composition- and structure-based formation energy and band gap prediction problems, we demonstrate that with redundancy control, the prediction performances of the ML models on test sets tend to have relatively lower performance compared to the model with high redundancy, but better reflect models’ true prediction capability.

由于材料设计历来采用修修补补的方法,材料数据集通常包含许多冗余(高度相似)材料。在使用随机拆分时,这种冗余会使机器学习(ML)模型的性能评估出现偏差,导致预测性能被高估,并且在非分布样本上的性能不佳。这个问题在生物信息学的蛋白质功能预测中是众所周知的,CD-HIT 等工具通过确保样本间的序列相似性大于给定阈值来减少冗余。在本文中,我们调查了材料科学中用于材料特性预测的被高估的 ML 性能,并提出了 MD-HIT,一种用于材料数据集的冗余减少算法。将 MD-HIT 应用于基于成分和结构的形成能和带隙预测问题,我们证明了在冗余控制下,ML 模型在测试集上的预测性能往往比高冗余度模型的性能相对较低,但能更好地反映模型的真实预测能力。
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引用次数: 0
Accurate formation enthalpies of solids using reaction networks 利用反应网络精确计算固体形成焓
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-14 DOI: 10.1038/s41524-024-01404-5
Rasmus Fromsejer, Bjørn Maribo-Mogensen, Georgios M. Kontogeorgis, Xiaodong Liang

Crystalline solids play a fundamental role in a host of materials and technologies, ranging from pharmaceuticals to renewable energy. The thermodynamic properties of these solids are crucial determinants of their stability and therefore their behavior. The advent of large density functional theory databases with properties of solids has stimulated research on predictive methods for their thermodynamic properties, especially for the enthalpy of formation ΔfH. Increasingly sophisticated artificial intelligence and machine learning (ML) models have primarily driven development in this field in recent years. However, these models can suffer from lack of generalizability and poor interpretability. In this work, we explore a different route and develop and evaluate a framework for the application of reaction network (RN) theory to the prediction of ΔfH of crystalline solids. For an experimental dataset of 1550 compounds we are able to obtain a mean absolute error w.r.t ΔfH of 29.6 meV atom−1 using the RN approach. This performance is better than existing ML-based predictive methods and close to the experimental uncertainty. Moreover, we show that the RN framework allows for straightforward estimation of the uncertainty of the predictions.

晶体固体在从制药到可再生能源等众多材料和技术中发挥着重要作用。这些固体的热力学性质是决定其稳定性和行为的关键因素。包含固体特性的大型密度泛函理论数据库的出现,促进了对其热力学特性,尤其是形成焓 ΔfH 的预测方法的研究。近年来,越来越复杂的人工智能和机器学习(ML)模型主要推动了这一领域的发展。然而,这些模型可能存在缺乏通用性和可解释性差的问题。在这项工作中,我们探索了一条不同的途径,并开发和评估了一个将反应网络(RN)理论应用于晶体固体ΔfH 预测的框架。对于包含 1550 种化合物的实验数据集,我们利用 RN 方法得出的 ΔfH 平均绝对误差为 29.6 meV atom-1。这一结果优于现有的基于 ML 的预测方法,并且接近实验的不确定性。此外,我们还表明 RN 框架允许直接估计预测的不确定性。
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引用次数: 0
Unsupervised deep denoising for four-dimensional scanning transmission electron microscopy 用于四维扫描透射电子显微镜的无监督深度去噪技术
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-13 DOI: 10.1038/s41524-024-01428-x
Alireza Sadri, Timothy C. Petersen, Emmanuel W. C. Terzoudis-Lumsden, Bryan D. Esser, Joanne Etheridge, Scott D. Findlay

By simultaneously achieving high spatial and angular sampling resolution, four dimensional scanning transmission electron microscopy (4D STEM) is enabling analysis techniques that provide great insight into the atomic structure of materials. Applying these techniques to scientifically and technologically significant beam-sensitive materials remains challenging because the low doses needed to minimise beam damage lead to noisy data. We demonstrate an unsupervised deep learning model that leverages the continuity and coupling between the probe position and the electron scattering distribution to denoise 4D STEM data. By restricting the network complexity it can learn the geometric flow present but not the noise. Through experimental and simulated case studies, we demonstrate that denoising as a preprocessing step enables 4D STEM analysis techniques to succeed at lower doses, broadening the range of materials that can be studied using these powerful structure characterization techniques.

通过同时实现高空间和角度取样分辨率,四维扫描透射电子显微镜(4D STEM)实现了分析技术,为深入了解材料的原子结构提供了可能。将这些技术应用于在科学和技术上具有重要意义的光束敏感材料仍具有挑战性,因为要尽量减少光束损伤所需的低剂量会导致数据嘈杂。我们展示了一种无监督深度学习模型,该模型利用探针位置与电子散射分布之间的连续性和耦合性对 4D STEM 数据进行去噪。通过限制网络的复杂性,它可以学习到存在的几何流,但无法学习到噪声。通过实验和模拟案例研究,我们证明了作为预处理步骤的去噪技术能使 4D STEM 分析技术在较低剂量下取得成功,从而扩大了可使用这些强大的结构表征技术研究的材料范围。
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引用次数: 0
Phonon-limited mobility for electrons and holes in highly-strained silicon 高应变硅中电子和空穴的声子限制迁移率
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-12 DOI: 10.1038/s41524-024-01425-0
Nicolas Roisin, Guillaume Brunin, Gian-Marco Rignanese, Denis Flandre, Jean-Pierre Raskin, Samuel Poncé

Strain engineering is a widely used technique for enhancing the mobility of charge carriers in semiconductors, but its effect is not fully understood. In this work, we perform first-principles calculations to explore the variations of the mobility of electrons and holes in silicon upon deformation by uniaxial strain up to 2% in the [100] crystal direction. We compute the π11 and π12 electron piezoresistances based on the low-strain change of resistivity with temperature in the range 200 K to 400 K, in excellent agreement with experiment. We also predict them for holes which were only measured at room temperature. Remarkably, for electrons in the transverse direction, we predict a minimum room-temperature mobility about 1200 cm2 V−1 s−1 at 0.3% uniaxial tensile strain while we observe a monotonous increase of the longitudinal transport, reaching a value of 2200 cm2 V−1 s−1 at high strain. We confirm these findings experimentally using four-point bending measurements, establishing the reliability of our first-principles calculations. For holes, we find that the transport is almost unaffected by strain up to 0.3% uniaxial tensile strain and then rises significantly, more than doubling at 2% strain. Our findings open new perspectives to boost the mobility by applying a stress in the [100] direction. This is particularly interesting for holes for which shear strain was thought for a long time to be the only way to enhance the mobility.

应变工程是一种广泛应用于提高半导体中电荷载流子迁移率的技术,但其效果尚未得到充分了解。在这项工作中,我们进行了第一性原理计算,以探索硅中电子和空穴的迁移率在[100]晶体方向上发生高达 2% 的单轴应变变形时的变化。我们根据 200 K 至 400 K 范围内电阻率随温度的低应变变化计算出了π11 和π12 电子压阻,与实验结果非常吻合。我们还预测了仅在室温下测量的空穴的压阻。值得注意的是,对于横向电子,我们预测在 0.3% 单轴拉伸应变时,室温迁移率最小值约为 1200 cm2 V-1 s-1,而我们观察到纵向迁移率单调上升,在高应变时达到 2200 cm2 V-1 s-1。我们通过四点弯曲测量实验证实了这些发现,从而确立了第一原理计算的可靠性。对于空穴,我们发现在 0.3% 单轴拉伸应变之前,其传输几乎不受应变的影响,而在 2% 应变时,传输会显著增加一倍以上。我们的发现为通过在 [100] 方向施加应力来提高迁移率开辟了新的前景。这对于长期以来被认为是唯一能提高流动性的剪切应变孔来说尤其有趣。
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引用次数: 0
Fast prediction of anharmonic vibrational spectra for complex organic molecules 快速预测复杂有机分子的非谐波振动光谱
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-10 DOI: 10.1038/s41524-024-01400-9
Mattia Miotto, Lorenzo Monacelli

Interpreting Raman and IR vibrational spectra in complex organic molecules lacking symmetries poses a formidable challenge. In this study, we propose an innovative approach for simulating vibrational spectra and attributing observed peaks to molecular motions, even when highly anharmonic, without the need for computationally expensive ab initio calculations. Our approach stems from the time-dependent stochastic self-consistent harmonic approximation to capture quantum nuclear fluctuations in atom dynamics while describing interatomic interaction through state-of-the-art reactive machine-learning force fields. Finally, we employ an isotropic charge model and a bond capacitor model trained on ab initio data to predict the intensity of IR and Raman signals.

解读缺乏对称性的复杂有机分子的拉曼和红外振动光谱是一项艰巨的挑战。在本研究中,我们提出了一种创新方法,用于模拟振动光谱并将观测到的峰值归因于分子运动,即使是在高度非谐波的情况下,也无需进行计算成本高昂的 ab initio 计算。我们的方法源于随时间变化的随机自洽谐波近似,以捕捉原子动力学中的量子核波动,同时通过最先进的反应式机器学习力场来描述原子间的相互作用。最后,我们采用各向同性电荷模型和在 ab initio 数据基础上训练的键电容模型来预测红外和拉曼信号的强度。
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引用次数: 0
Deuteration removes quantum dipolar defects from KDP crystals 氘化消除 KDP 晶体中的量子偶极缺陷
IF 9.7 1区 材料科学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2024-10-10 DOI: 10.1038/s41524-024-01431-2
Bingjia Yang, Pinchen Xie, Roberto Car

Dielectric properties of the hydrogen-bonded ferroelectric crystal KH2PO4 (KDP) differ significantly from those of KD2PO4 (DKDP). It is well established that deuteration affects the interplay of hydrogen-bond switches and heavy ion displacements that underlie the emergence of macroscopic polarization, but a detailed microscopic model is missing. We show that all-atom path integral molecular dynamics simulations can predict the isotope effects, revealing the microscopic mechanism that differentiates KDP and DKDP. Proton tunneling generates phosphate configurations that do not contribute to the polarization. At low temperatures, these quantum dipolar defects are substantial in KDP but negligible in DKDP. These intrinsic defects explain why KDP has lower spontaneous polarization and transition entropy than DKDP. The prominent role of quantum fluctuations in KDP is related to the unusual strength of the hydrogen bonds and should be equally important in other crystals of the KDP family, which exhibit similar isotope effects.

氢键铁电晶体 KH2PO4(KDP)的介电特性与 KD2PO4(DKDP)的介电特性有很大不同。众所周知,氘化会影响氢键开关和重离子位移的相互作用,而这正是出现宏观极化的基础,但目前还缺乏详细的微观模型。我们的研究表明,全原子路径积分分子动力学模拟可以预测同位素效应,揭示区别 KDP 和 DKDP 的微观机制。质子隧穿产生的磷酸构型对极化不起作用。在低温条件下,这些量子偶极缺陷在 KDP 中非常明显,而在 DKDP 中却可以忽略不计。这些内在缺陷解释了为什么 KDP 的自发极化和转变熵低于 DKDP。量子波动在 KDP 中的突出作用与不寻常的氢键强度有关,在 KDP 家族的其他晶体中也同样重要,这些晶体表现出类似的同位素效应。
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引用次数: 0
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npj Computational Materials
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