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Rooting for order: How CIKs keep lateral growth in check. 扎根秩序:CIK 如何控制横向发展。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae621
Alicja B Kunkowska, Nicola Trozzi
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引用次数: 0
Transcription factors PuNAC37/PuWRKY74 and E3 ubiquitin ligase PuRDUF2 inhibit volatile ester synthesis in 'Nanguo' pear. 转录因子 PuNAC37/PuWRKY74 和 E3 泛素连接酶 PuRDUF2 可抑制'南果'梨的挥发性酯合成。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae635
Nannan Zang, Xiaojing Li, Zhuoran Zhang, Weiting Liu, Liyong Qi, Yueming Yang, Qitian Sun, Zepeng Yin, Aide Wang

As major contributors to flavor in many fruit species, volatile esters are useful for investigating the regulation of the biosynthesis pathways of volatile aroma compounds in plants. Ethylene promotes the biosynthesis of volatile esters during fruit storage while accelerating fruit ripening; thus, the ethylene perception inhibitor 1-methylcyclopropene (1-MCP) is employed to prolong the shelf life of fruits. However, the mechanisms by which 1-MCP regulates volatiles synthesis remain unclear. In this study, we analyzed the pathway of 1-MCP-mediated volatile ester synthesis in 'Nanguo' pear (Pyrus ussuriensis). 1-MCP significantly decreased volatile ester synthesis during storage. Comparative transcriptome analysis showed that the genes encoding two transcription factors (PuNAC37 and PuWRKY74) and a RING-type E3 ubiquitin ligase that have a domain of unknown function (PuRDUF2) were expressed at high levels, whereas ALCOHOL ACYLTRANSFERASE 1 (PuAAT1), encoding an enzyme responsible for volatile ester synthesis, was expressed at low levels in 1-MCP-treated fruit. Moreover, PuNAC37 inhibited the expression of PuWRKY74 via transcriptional regulation, whereas PuNAC37 and PuWRKY74, after directly binding to the promoter of PuAAT1, synergistically inhibited its expression in 1-MCP-treated fruit. In addition, in vitro and in vivo ubiquitination experiments revealed that PuRDUF2 functions as an E3 ubiquitin ligase that ubiquitinates PuAAT1, causing its degradation via the 26S proteasome pathway following 1-MCP treatment. Subsequent PuAAT1 degradation resulted in a reduction of volatile esters during fruit storage. Our findings provide insights into the complex transcriptional regulation of volatile ester formation in 'Nanguo' pears and contribute to future research on AAT protein ubiquitination in other species.

挥发性酯类是许多水果品种风味的主要成分,有助于研究植物挥发性芳香化合物生物合成途径的调控。乙烯会促进水果贮藏过程中挥发性酯类的生物合成,同时加速水果成熟;因此,乙烯感知抑制剂 1-甲基环丙烯(1-MCP)被用来延长水果的货架期。然而,1-MCP 调节挥发性物质合成的机制仍不清楚。在这项研究中,我们分析了 1-MCP 介导的'南果'梨(Pyrus ussuriensis)挥发性酯合成的途径。1-MCP 在贮藏过程中明显减少了挥发性酯的合成。转录组比较分析表明,在经 1-MCP 处理的果实中,编码两个转录因子(PuNAC37 和 PuWRKY74)和一个具有未知功能域的 RING 型 E3 泛素连接酶(PuRDUF2)的基因高水平表达,而编码一种负责挥发性酯合成的酶的 ALCOHOL ACYLTRANSFERASE 1(PuAAT1)基因则低水平表达。此外,PuNAC37 通过转录调控抑制了 PuWRKY74 的表达,而 PuNAC37 和 PuWRKY74 直接与 PuAAT1 的启动子结合后,能协同抑制其在 1-MCP 处理果实中的表达。此外,体外和体内泛素化实验显示,PuRDUF2 作为一种 E3 泛素连接酶,能泛素化 PuAAT1,使其在 1-MCP 处理后通过 26S 蛋白酶体途径降解。随后的 PuAAT1 降解导致果实贮藏期间挥发性酯类减少。我们的研究结果有助于深入了解'南果'梨挥发性酯形成的复杂转录调控,并有助于今后对其他物种中 AAT 蛋白泛素化的研究。
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引用次数: 0
CDPK5 and CDPK13 play key roles in acclimation to low oxygen through the control of RBOH-mediated ROS production in rice. CDPK5 和 CDPK13 通过控制 RBOH 介导的 ROS 生成,在水稻适应低氧过程中发挥关键作用。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae293
Jingxia Li, Takahiro Ishii, Miki Yoshioka, Yuta Hino, Mika Nomoto, Yasuomi Tada, Hirofumi Yoshioka, Hirokazu Takahashi, Takaki Yamauchi, Mikio Nakazono

CALCIUM-DEPENDENT PROTEIN KINASE (CDPK) stimulates reactive oxygen species (ROS)-dependent signaling by activating RESPIRATORY BURST OXIDASE HOMOLOG (RBOH). The lysigenous aerenchyma is a gas space created by cortical cell death that facilitates oxygen diffusion from the shoot to the root tips. Previously, we showed that RBOHH is indispensable for the induction of aerenchyma formation in rice (Oryza sativa) roots under low-oxygen conditions. Here, we showed that CDPK5 and CDPK13 localize to the plasma membrane where RBOHH functions. Mutation analysis of the serine at residues 92 and 107 of RBOHH revealed that these residues are required for CDPK5- and CDPK13-mediated activation of ROS production. The requirement of Ca2+ for CDPK5 and CDPK13 function was confirmed using in vitro kinase assays. CRISPR/Cas9-based mutagenesis of CDPK5 and/or CDPK13 revealed that the double knockout almost completely suppressed inducible aerenchyma formation, whereas the effects were limited in the single knockout of either CDPK5 or CDPK13. Interestingly, the double knockout almost suppressed the induction of adventitious root formation, which is widely conserved in vascular plants, under low-oxygen conditions. Our results suggest that CDPKs are essential for the acclimation of rice to low-oxygen conditions and also for many other plant species conserving CDPK-targeted phosphorylation sites in RBOH homologs.

钙独立蛋白激酶(CDPK)通过激活呼吸猝灭氧化酶同工酶(RBOH)来刺激依赖于活性氧(ROS)的信号传导。溶血气肿是由皮层细胞死亡产生的气体空间,有利于氧气从芽扩散到根尖。此前,我们发现 RBOHH 是低氧条件下诱导水稻(Oryza sativa)根部形成气肿不可或缺的因素。在这里,我们发现 CDPK5 和 CDPK13 定位于 RBOHH 发挥作用的质膜上。对 RBOHH 第 92 和 107 位丝氨酸的突变分析表明,这些残基是 CDPK5 和 CDPK13 介导的 ROS 生成激活所必需的。体外激酶试验证实了 Ca2+ 对 CDPK5 和 CDPK13 功能的要求。基于CRISPR/Cas9的CDPK5和/或CDPK13诱变发现,双基因敲除几乎完全抑制了诱导性气肿的形成,而单基因敲除CDPK5或CDPK13的效果有限。有趣的是,在低氧条件下,双基因敲除几乎抑制了在维管植物中广泛存在的不定根的诱导形成。我们的研究结果表明,CDPKs 对于水稻适应低氧条件是必不可少的,对于在 RBOH 同源物中保留 CDPK 靶向磷酸化位点的许多其他植物物种也是如此。
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引用次数: 0
Transcription factor PagWRKY33 regulates gibberellin signaling and immune receptor pathways in Populus. 转录因子 PagWRKY33 调节杨树赤霉素信号和免疫受体通路。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae593
Xiao-Qian Yu, Hao-Qiang Niu, Yue-Mei Zhang, Xiao-Xu Shan, Chao Liu, Hou-Ling Wang, Weilun Yin, Xinli Xia

Enhanced autoimmunity often leads to impaired plant growth and development, and the coordination of immunity and growth in Populus remains elusive. In this study, we have identified the transcription factors PagWRKY33a/b as key regulators of immune response and growth maintenance in Populus. The disruption of PagWRKY33a/b causes growth issues and autoimmunity while conferring resistance to anthracnose caused by Colletotrichum gloeosporioides. PagWRKY33a/b binds to the promoters of N requirement gene 1.1 (NRG1.1) and Gibberellic Acid-Stimulated in Arabidopsis (GASA14) during infection, activating their transcription. This process maintains disease resistance and engages in GA signaling to reduce growth costs from immune activation. The oxPagWRKY33a/nrg1.1 mutant results in reduced resistance to C. gloeosporioides. Further, PagWRKY33a/b is phosphorylated and activated by mitogen-activated protein kinase kinase 1, which inhibits respiratory burst oxidase homolog D (RBOHD) and respiratory burst oxidase homolog I (RBOHI) transcription, causing reactive oxygen species bursts in wrky33a/b double mutants. This leads to an upregulation of PagNRG1.1 in the absence of pathogens. However, the wrky33a/b/nrg1.1 and wrky33a/b/rbohd triple mutants show compromised defense responses, underscoring the complexity of WRKY33 regulation. Additionally, the stability of PagWRKY33 is modulated by Ring Finger Protein 5 (PagRNF5)-mediated ubiquitination, balancing plant immunity and growth. Together, our results provide key insights into the complex function of WRKY33 in Populus autoimmunity and its impact on growth and development.

自身免疫力的增强往往会导致植物生长和发育受损,而杨树中免疫力和生长之间的协调关系仍然难以捉摸。在这项研究中,我们发现转录因子 PagWRKY33a/b 是杨树免疫反应和生长维持的关键调节因子。破坏 PagWRKY33a/b 会导致生长问题和自身免疫,同时赋予杨树对由 Colletotrichum gloeosporioides 引起的炭疽病的抗性。在感染过程中,PagWRKY33a/b 与拟南芥的氮需要基因 1.1(NRG1.1)和赤霉素刺激基因(GASA14)的启动子结合,激活它们的转录。这一过程可保持抗病性,并参与 GA 信号转导,以降低免疫激活带来的生长成本。oxPagWRKY33a/nrg1.1突变体对球孢子菌的抗性降低。此外,PagWRKY33a/b 被丝裂原活化蛋白激酶激酶 1(MKK1)磷酸化和激活,从而抑制呼吸猝灭氧化酶同源物 D(RBOHD)和呼吸猝灭氧化酶同源物 I(RBOHI)的转录,导致 wrky33a/b 双突变体中的 ROS 暴发。这导致 PagNRG1.1 在没有病原体的情况下上调。然而,wrky33a/b/nrg1.1 和 wrky33a/b/rbohd 三重突变体的防御反应受到影响,这突出了 WRKY33 调节的复杂性。此外,环指蛋白 5(PagRNF5)介导的泛素化调节了 PagWRKY33 的稳定性,平衡了植物的免疫和生长。总之,我们的研究结果为了解 WRKY33 在杨树自身免疫中的复杂功能及其对生长和发育的影响提供了重要见解。
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引用次数: 0
GLABRA3-mediated trichome branching requires transcriptional repression of MICROTUBULE-DESTABILIZING PROTEIN25. GLABRA3 介导的毛状体分枝需要 MICROTUBULE-DESTABILIZING PROTEIN25 的转录抑制。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae563
Wenfei Xie, Yuang Zhao, Xianwang Deng, Ruixin Chen, Zhiquan Qiang, Pedro García-Caparros, Tonglin Mao, Tao Qin

Microtubules play pivotal roles in establishing trichome branching patterns, which is a model system for studying cell-shape control in Arabidopsis (Arabidopsis thaliana). However, the signaling pathway that regulates microtubule reorganization during trichome branching remains poorly understood. In this study, we report that MICROTUBULE-DESTABILIZING PROTEIN25 (MDP25) is involved in GLABRA3 (GL3)-mediated trichome branching by regulating microtubule stability. Loss of MDP25 function led to excessive trichome branching, and this phenotype in mdp25 could not be rescued by the MDP25 K7A or MDP25 K18A mutated variants. Pharmacological treatment and live-cell imaging revealed increased microtubule stability in the mdp25 mutant. Furthermore, the microtubule collar observed during trichome branching remained more intact in mdp25 compared to the WT under oryzalin treatment. Results of genetic assays further demonstrated that knocking out MDP25 rescued the reduced branching phenotype of gl3 trichomes. In gl3 trichomes, normal microtubule organization was disrupted, and microtubule stability was significantly compromised. Moreover, GL3 physically bound to the MDP25 promoter, thereby inhibiting its expression. Overexpression of GL3 negated the effects of PMDP25-driven MDP25 or its mutant proteins on trichome branching and microtubules in the mdp25 background. Overall, our study uncovers a mechanism by which GL3 inhibits MDP25 transcription, thereby influencing microtubule stability and regulating trichome branching. This mechanism provides a connection between early regulatory components and microtubules during trichome development.

微管在建立毛状体分枝模式中起着关键作用,而毛状体分枝模式是研究拟南芥(Arabidopsis thaliana)细胞形状控制的一个模型系统。然而,人们对毛状体分枝过程中调节微管重组的信号通路仍然知之甚少。在这项研究中,我们报告了微管破坏蛋白25(MDP25)通过调节微管稳定性参与了GLABRA3(GL3)介导的毛状体分枝。MDP25 功能缺失会导致毛状体分支过多,而 MDP25 K7A 或 MDP25 K18A 突变变体无法挽救 mdp25 的这种表型。药理处理和活细胞成像显示,mdp25 突变体的微管稳定性增强。此外,在毛状体分枝过程中观察到的微管轴环在奥利唑啉处理下比在 WT 中保持得更完整。基因检测结果进一步证明,敲除MDP25可以挽救gl3毛状体分支减少的表型。在gl3毛状体中,正常的微管组织被破坏,微管的稳定性受到显著影响。此外,GL3与MDP25启动子物理结合,从而抑制了其表达。在 mdp25 背景下,过量表达 GL3 可抵消 PMDP25 驱动的 MDP25 或其突变体蛋白对毛状体分枝和微管的影响。总之,我们的研究发现了GL3抑制MDP25转录从而影响微管稳定性和调控毛状体分枝的机制。这一机制提供了毛状体发育过程中早期调控成分与微管之间的联系。
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引用次数: 0
Go with the flux: Modeling accurately predicts phenotypes of Arabidopsis lipid mutants. 随波逐流:建模准确预测拟南芥脂质突变体的表型
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae620
Erin Cullen, Maneesh Lingwan
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引用次数: 0
Geography, altitude, agriculture, and hypoxia. 地理、海拔、农业和缺氧。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae535
Michael J Holdsworth, Huanhuan Liu, Simone Castellana, Mohamad Abbas, Jianquan Liu, Pierdomenico Perata

Reduced oxygen availability (hypoxia) represents a key plant abiotic stress in natural and agricultural systems, but conversely it is also an important component of normal growth and development. We review recent advances that demonstrate how genetic adaptations associated with hypoxia impact the known plant oxygen-sensing mechanism through the PLANT CYSTEINE OXIDASE N-degron pathway. Only 3 protein substrates of this pathway have been identified, and all adaptations identified to date are associated with the most important of these, the group VII ETHYLENE RESPONSE FACTOR transcription factors. We discuss how geography, altitude, and agriculture have all shaped molecular responses to hypoxia and how these responses have emerged at different taxonomic levels through the evolution of land plants. Understanding how ecological and agricultural genetic variation acts positively to enhance hypoxia tolerance will provide novel tools and concepts to improve the performance of crops in the face of increasing extreme flooding events.

在自然和农业系统中,氧气供应减少(缺氧)是一种关键的植物非生物胁迫,但反过来,它也是正常生长和发育的重要组成部分。我们回顾了最近的研究进展,这些进展证明了与缺氧相关的遗传适应如何通过植物铜氧化酶(PCO)N-降解途径影响已知的植物氧感应机制。目前只确定了该途径的三种蛋白质底物,而迄今为止确定的所有适应性都与其中最重要的第七组乙烯反应因子转录因子(ERFVIIs)有关。我们讨论了地理、海拔和农业如何塑造了对缺氧的分子反应,以及这些反应是如何通过陆地植物的进化在不同的分类水平上出现的。了解生态和农业遗传变异如何对提高缺氧耐受性起到积极作用,将为面对日益严重的极端洪水事件改善作物表现提供新的工具和概念。
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引用次数: 0
The role of OsDGD1 in phosphate starvation: How lipid remodeling regulates jasmonic acid and root development in rice. OsDGD1 在磷酸盐饥饿中的作用:脂质重塑如何调节水稻的茉莉酸和根系发育。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae524
Alaeddine Safi
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引用次数: 0
A role for aquaporins in the modulation of cold stress tolerance in oriental melon. 水汽素在调节东方甜瓜的冷胁迫耐受性中的作用
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae578
Maria-Angelica Sanclemente
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引用次数: 0
Cucumber JASMONATE ZIM-DOMAIN 8 interaction with transcription factor MYB6 impairs waterlogging-triggered adventitious rooting. 黄瓜 JASMONATE ZIM-DOMAIN 6 与转录因子 MYB6 的相互作用会影响水涝引发的不定根。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-12-23 DOI: 10.1093/plphys/kiae351
Jiawei Pan, Hamza Sohail, Rahat Sharif, Qiming Hu, Jia Song, Xiaohua Qi, Xuehao Chen, Xuewen Xu

Waterlogging is a serious abiotic stress that drastically decreases crop productivity by damaging the root system. Jasmonic acid (JA) inhibits waterlogging-induced adventitious root (AR) formation in cucumber (Cucumis sativus L.). However, we still lack a profound mechanistic understanding of how JA governs AR formation under waterlogging stress. JASMONATE ZIM-DOMAIN (JAZ) proteins are responsible for repressing JA signaling in a transcriptional manner. In this study, we showed that overexpressing CsJAZ8 inhibited the formation of ARs triggered by waterlogging. Molecular analyses revealed that CsJAZ8 inhibited the activation of the R2R3-MYB transcription factor CsMYB6 via direct interaction. Additionally, silencing of CsMYB6 negatively impacted AR formation under waterlogging stress, as CsMYB6 could directly bind to the promoters of 1-aminocyclopropane-1-carboxylate oxidase 2 gene CsACO2 and gibberellin 20-oxidase gene CsGA20ox2, facilitating the transcription of these genes. The overexpression of CsACO2 and CsGA20ox2 led to increased levels of ethylene and gibberellin, which facilitated AR formation under waterlogging conditions. On the contrary, silencing these genes resulted in contrasting phenotypes of AR formation. These results highlight that the transcriptional cascade of CsJAZ8 and CsMYB6 plays a critical role in regulating hormonal-mediated cucumber waterlogging-triggered AR formation by inhibiting ethylene and gibberellin accumulation. We anticipate that our findings will provide insights into the molecular mechanisms that drive the emergence of AR in cucumber plants under waterlogging stress.

涝害是一种严重的非生物胁迫,它通过破坏根系而大大降低作物的产量。茉莉酸(JA)可抑制黄瓜(Cucumis sativus L.)在涝害胁迫下诱导的不定根(AR)的形成。 然而,我们对 JA 如何在涝害胁迫下调控 AR 的形成仍缺乏深刻的机理认识。JAZ(JASMONATE ZIM-DOMAIN)蛋白负责以转录方式抑制 JA 信号转导。在本研究中,我们发现过表达 CsJAZ8 可抑制由水涝引发的 AR 的形成。分子分析表明,CsJAZ8 通过直接相互作用抑制了 R2R3-MYB 转录因子 CsMYB6 的激活。此外,沉默 CsMYB6 对水涝胁迫下 AR 的形成有负面影响,因为 CsMYB6 可直接与 1-氨基环丙烷-1-羧酸氧化酶 2 基因 CsACO2 和赤霉素 20-氧化酶基因 CsGA20ox2 的启动子结合,促进这些基因的转录。CsACO2 和 CsGA20ox2 的过表达导致乙烯和赤霉素水平的增加,从而促进了水涝条件下 AR 的形成。相反,沉默这些基因会导致 AR 形成相反的表型。这些结果突出表明,CsJAZ8 和 CsMYB6 的转录级联通过抑制乙烯和赤霉素的积累,在调控激素介导的黄瓜涝害触发的 AR 形成过程中发挥了关键作用。我们预计,我们的研究结果将有助于深入了解黄瓜植物在涝胁迫下出现 AR 的分子机制。
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引用次数: 0
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Plant Physiology
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