Progress in Oceanography最新文献

The twilight zone remineralization (TZR) consumes over 70% of organic carbon exported from the sunlit ocean, significantly affecting oceanic carbon sequestration and atmospheric CO₂ concentration. Despite the well-established importance, the quantification of TZR remains challenging, as reflected by conspicuous methodological discrepancy and the unsolved imbalance between carbon supply from the upper layer and demand at depth. Here we combined three independent approaches, including biogeochemical profiling floats (BGC-float) observation, in vivo reduction of the tetrazolium salt by the cellular electron transport system (in vivo INT), and the synthesis of prokaryotic respiration (PR) determined by radiolabeled leucine incorporation and zooplankton respiration (ZR) empirically estimated from the biomass (PR + ZR), to investigate the TZR in the South China Sea basin. Our results show that the BGC-float and PR + ZR approaches gave more consistent results, with the respective values of 5.1 ± 0.5 and 6.4 ± 3.0 mol C m⁻² yr⁻¹. However, in vivo INT approach yielded a TZR nearly an order of magnitude higher at 30.0 ± 6.1 mol C m⁻² yr⁻¹. To further reconcile methodological discrepancies, we estimated the possible range of carbon supply by integrating comprehensive carbon sources, including sinking particles, dissolved organic carbon input, lateral transport, dark carbon fixation, and active carbon transport by zooplankton migration. After considering multiple carbon sources, we successfully balanced the carbon demand as indicated by BGC-float and PR + ZR approaches. Our intercomparison exercise suggests a potential overestimation of TZR by the in vivo INT approach, and also highlights the importance of integrating multiple carbon sources in closing the twilight zone carbon budget.

The ocean sustains ecosystems that are essential for human livelihood and habitability of the planet. The ocean holds an enormous amount of carbon, and serves as a critical source of nutrition for human societies worldwide. Climate variability and change impact marine biogeochemistry and ecosystems. Thus, having state-of-the-art simulations of the ocean, which include marine biogeochemistry and ecosystems, is critical for understanding the role of climate variability and change on the ocean biosphere. Here we present a novel global eddy-resolving (0.1° horizontal resolution) simulation of the ocean and sea ice, including ocean biogeochemistry, performed with the Community Earth System Model (CESM). The simulation is forced by the atmospheric dataset based on the Japanese Reanalysis (JRA-55) product over the 1958–2021 period. We present a novel configuration of the CESM marine ecosystem model in this simulation which includes two zooplankton classes: microzooplankton and mesozooplankton. This novel planktonic food web structure facilitates “offline” coupling with the Fisheries Size and Functional Type (FEISTY) model. FEISTY is a size- and trait-based model of fish functional types contributing to fisheries. We present an evaluation of the ocean biogeochemistry, marine ecosystem (including fish types), and sea ice in this high resolution simulation compared to available observations and a corresponding low resolution (nominal 1°) simulation. Our analysis offers insights into environmental controls on trophodynamics within the ocean. We find that this high resolution simulation provides a realistic reconstruction of nutrients, oxygen, sea ice, plankton and fish distributions over the global ocean. On global and large regional scales the high resolution simulation is comparable to the standard 1° simulation, but on smaller scales, explicitly resolving the mesoscale dynamics is shown to be important for accurately capturing trophodynamic structuring, especially in coastal ecosystems. We show that fine-scale ocean features leave imprints on ocean ecosystems, from plankton to fish, from the tropics to polar regions. This simulation also offers insights on ocean acidification over the past 64 years, as well as how large-scale climate variations may impact upper trophic levels. The data generated by the simulations are publicly available and will be a fruitful community resource for a large variety of oceanographic science questions.

The diverse microbial community in the ocean, encompassing various metabolic types, interacts with the wide array of compounds in the dissolved organic matter (DOM) pool, thereby influencing the ocean’s biogeochemical state and, consequently, the global climate. Our understanding of the interactions between specific DOM constituents and microbial consortia remains limited, necessitating further refinement to achieve a mechanistic comprehension of the relationship between the DOM field and the microbial metabolic network. Attaining this level of understanding is crucial for accurately predicting the marine ecosystem’s response to natural and anthropogenic perturbations. To address this gap, we developed a bacterial population model based on the von Foerster equation. This model aims to describe the complex microbial-mediated degradation of gelatinous zooplankton (hereinafter ‘jellyfish’) detritus, as an important, but largely overlooked source of DOM in the ocean. By considering microbial growth and decay, as well as DOM uptake, and nutrient release, the model is able to describe the microbial community’s life cycle, and the biochemical transformations of the jellyfish-derived organic matter. We fitted the model to results of laboratory microcosm experiments conducted to simulate scenarios experienced by ambient microbiomes during decay of two different jellyfish species in the northern Adriatic Sea. By interpreting the fitted parameters, we highlight the differences in the microbial response to different jellyfish species, namely how these affect the microbial community composition and the release of nutrients. This model has been specifically designed for integration with ocean circulation models to create a comprehensive physical-biogeochemical ocean model. Such an extended model can be utilized for multi-scale simulations to assess the system’s response to jellyfish and jellyfish-derived organic matter. Given that jellyfish blooms may become more prevalent under future ocean scenarios, this modeling approach is essential for understanding their potential impact on marine ecosystems.

Understanding how future ocean conditions will impact early life stages and population recruitment of fishes is critical for adapting fisheries communities to climate change. In this study, we incorporated projected changes in physical and biological ecosystem dynamics from an oceanographic model into a mechanistic individual-based model for larval and juvenile stages of the Pacific cod (Gadus macrocephalus) in the eastern Bering Sea. We particularly investigated the impacts of ocean currents, temperature, prey density, and pCO2 on the hatching success, growth, survival, and spatial distribution of this species during 2021–2100. We evaluated two CO₂ emission scenarios: RCP8.5 (high CO₂ emissions, low mitigation efforts) and RCP4.5 (medium CO₂ emissions and mitigation efforts). We found that the increase in temperature and decrease in prey density were the main drivers of faster growth rates and lower survival through increased starvation by the end of the century. Conversely, pCO₂ had negligible impacts, which suggests that this species might be resilient to ocean acidification. The largest effects were observed under the high CO₂ emission scenario, while the RCP4.5 projections displayed minimal impacts. We also identified an area with favourable conditions in the southeastern Bering Sea that will likely persist in future decades. This study provides relevant information on the future impacts of climate change on Pacific cod, and our results can be used to implement and inform climate-ready management for this important stock in Alaska.

The hydrography of the central Greenland Sea was reconstructed from observations including bottle measurements, Conductivity/ Temperature/ Depth (CTD) measurements, and Argo floats for the period 1950 to 2020. Greenland Sea Deep Water was renewed during bottom-reaching convection prior to the mid-1980s, facilitated by the thermobaric effect. During a period of shallow convection in the late 1980s and early 1990s, a stratification maximum formed and isolated the deep from the intermediate Greenland Sea. As a consequence, convection was limited to depths shallower than 2000 m during the past decades and a new class of intermediate water formed instead of deep water. The initial cause for the formation of the stratification maximum was a near-surface freshwater anomaly. A subsequent, rapid temperature and salinity increase in the upper 2000 m resulted in an overall density reduction of the intermediate water which strengthened the stratification maximum. Along with the transition from formation of deep water to formation of intermediate water, the Greenland Sea became temperature-stratified at intermediate depths. This regime-shift in stratification can be traced to increased temperature and salinity in the inflowing Atlantic-origin Water. Below the stratification maximum, the Greenland Sea Deep Water became warmer and more saline, predominantly caused by lateral mixing with deep water masses from adjacent basins. The hydrographic changes in the Greenland Sea were investigated in the context of a reduction of the sea-ice extent and associated changes in winter heat loss. While interannual variability of convection depth may depend on atmospheric forcing, we found that the decadal variability of water-mass transformation in the Greenland Sea was largely determined by the hydrographic structure of the water column.

The mean structure and variability of the Equatorial Undercurrent (EUC) have important implications for upwelling, sea surface temperature (SST), and productivity in the ecologically vital Galápagos Cold Pool. Historically, global coupled climate model simulations have exhibited considerable biases in their simulation of the EUC due to the requirement of relatively high spatial resolution to represent its dynamics. Particularly in the eastern equatorial Pacific, models must also adequately resolve important topographic features to accurately simulate the regional circulation. Here, we examine the extent to which a high-resolution configuration of the NCAR Community Earth System Model (CESM) and a suite of models from the High-Resolution Model Intercomparison project (HighResMIP) adequately represent the regional ocean circulation and other important climatological features of the eastern equatorial Pacific such as the EUC and the associated temperature patterns defining the cold tongue/Galápagos Cold Pool complex. Comparisons with satellite SST and in situ velocity observations, and a high-resolution ocean reanalysis product, illustrate that the high-resolution configuration of the CESM captures many key aspects of the SST field and EUC uniquely well, including its seasonal-to-interannual variability in the eastern equatorial Pacific. Specific strengths and biases of this model with direct comparison to the HighResMIP ensemble are discussed in detail, along with the potential for application of these models to interdisciplinary research topics such as projecting climate change impacts on marine ecosystems.

Knowledge on the distribution of zooplankton in the many unique habitats of the Southern Ocean is essential for understanding food web dynamics, assessing the impacts of environmental change and for managing the exploitation of marine living resources. Variation in the distribution of zooplankton may occur in the horizontal as well as the vertical plane, and the latter may show a diel cycle (diel vertical migration or DVM). Conventional sampling methods, including several types of nets and acoustics, often undersample or ignore the top 10 m of the water column. The surface waters may, however, host a specific zooplankton community and therefore be an important foraging ground for higher trophic level predators. In order to investigate the importance of the surface waters for understanding the distribution of species and potentially improving abundance estimates, the upper two meters of the water column were sampled in the eastern Indian sector of the Southern Ocean using a Surface and Under Ice Trawl (SUIT). Findings were compared to the zooplankton community structure in the epipelagic (15–200 m). Results showed that the surface zooplankton community could largely be divided into two regions. The surface community of the western side of the sampling area hosted large numbers of Antarctic krill, Euphausia superba, which were only present in low densities in the epipelagic depth layer. Densities of Limacina helicina were also relatively high in the west. The copepod Calanus propinquus and the amphipod Themisto gaudichaudii were present in relatively large numbers throughout the sampling area. T. gaudichaudii was the dominant species of the surface in the eastern side of the sampling area in the absence of Antarctic krill. Apart from cirripedia nauplii, no species were uniquely found in the surface water compared to the 15–200 m depth layer. Surface water sampling revealed patterns in vertical distribution and DVM, and showed that these patterns changed between the first and second half of the expedition. This could partially be explained by environmental variables but was likely also a result of sampling time and location, and associated variation in the size and ontogeny of species. Results revealed the impact of undersampling the surface layer regarding knowledge on distribution and vertical migration patterns of zooplankton species.

Nitrogen fixation is a vital new nitrogen source in the oligotrophic ocean. Although our knowledge of the controlling factors of marine nitrogen fixation have increased rapidly, the physical controls, particularly eddies-induced upwelling and light intensity, remain elusive. In this study, conducted in the Subtropical Northwestern Pacific, we measured nitrogen fixation rates (NFR) in two cyclonic eddies (CEs). Our observations in one CE revealed that depth-integrated NFR (INFR) in core stations were significantly higher than in edge stations, indicating that CEs-induced upwelling might enhance nitrogen fixation. However, more intense upwelling in another CE resulted in lower INFR in core stations compared to edge stations. The INFR distributions in CEs were driven by the upwelling intensity, showing a unimodal response, i.e., the maximum INFR appeared at optimal upwelling intensity. This finding reconciles the debate about whether CEs inhibit nitrogen fixation. Additionally, results from light manipulation incubations proved that light intensity is a key driver for the vertically unimodal pattern of NFR, i.e., peaks at the subsurface layer with an optimum light intensity of 20% to 50% of surface PAR. Furthermore, molecular evidence showed that UCYN-A dominated in the upwelling area, while UCYN-B dominated in the non-upwelling area, indicating that CEs-induced physical perturbation regulates the niches of diazotrophs. Taken together, these results suggest that physical dynamics exert profound controls on the spatial heterogeneity of diazotrophic distribution and activity in the Subtropical Northwestern Pacific, providing new insights into the physical drivers of nitrogen fixation on mesoscale hydrodynamics..

The internal tide (IT) is the internal wave with tidal frequency. During propagation, ITs are scattered by topographies such as seamounts and slopes. Mesoscale eddies, which generally consist of anticyclonic eddies (AEs) and cyclonic eddies (CEs), are widely observed in the ocean and can modulate scattering processes. However, whether AEs and CEs affect topographic scattering of IT differently is unknown. In this study, the responses of semidiurnal IT scattering to mesoscale eddies are explored based on LLC4320 data and idealized numerical simulations. The results suggest that mesoscale eddies can both enhance and weaken scattering in topographic regions, causing spatial divergence in the scattering in response to eddies. This modulation can be attributed to the refraction of mode one IT by mesoscale eddies. AEs and CEs refract IT to opposite directions; therefore, they have opposite effects on modulating topographic scattering. Regions that undergo amplification of scattering by an AE would probably experience the weakening of scattering caused by a CE. These findings imply that eddies can actively participate in modulating IT scattering, which contributes to a better understanding of the interaction between internal waves and mesoscale eddies.

Capelin (Mallotus villosus) and polar cod (Boreogadus saida) hold a fundamental position in the Barents Sea ecosystem as consumers of zooplankton while serving as forage fish for the commercial and ecological key species Atlantic cod (Gadus morhua). The ongoing warming and Atlantification of the Barents Sea, along with increasing net primary production, makes previously inaccessible northern areas available as feeding grounds for capelin. The opposite effect is anticipated for the ice-dependent polar cod. The transport of Atlantic water with boreal plankton from the Norwegian Sea is important for sustaining biodiversity and production in the Barents Sea. A decline of the medium-sized mesozooplankton biomass to a low level during 2016 to 2022 coincided with a strongly decreasing summer volume transport with the Atlantic Current. The low biomass of medium-sized zooplankton observed in later years raises concern about the feeding conditions now experienced by the higher trophic levels.

Both capelin and polar cod feed predominantly on lipid rich sub-Arctic and Arctic zooplankton species. We found a significant inverse relationship between capelin and mesozooplankton biomass and a clear dietary shift from smaller to larger predator size. Smaller capelin (<12 cm) contained a comparatively higher proportion of copepods, dominated by Calanus glacialis, followed by C. finmarchicus and Metridia longa (copepodite stages IV-VI). As the capelin grow, their diet switches towards larger zooplankton, primarily euphausiids (mainly Thysanoessa inermis). All age groups of polar cod fed heavily on pelagic amphipods (mostly Themisto libellula) in addition to copepods and euphausiids, and to some degree also on fish, thus displaying a higher trophic position than capelin. Capelin growth from age 1 to 2 was negatively associated with their abundance at age 2, but positively related to stomach fullness for 2-year-old fish, indicating density-dependent growth. While our study reveals interactions between capelin and zooplankton, such signals between polar cod and their prey were not evident.