首页 > 最新文献

THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)最新文献

英文 中文
Screening and optimization of some Egyptian soil-born fungi for lipids production as possible source for biofuel 筛选和优化一些埃及土生真菌生产脂质作为生物燃料的可能来源
Pub Date : 2019-01-01 DOI: 10.5455/egyjebb.20190709123823
A. Zeid, Eman E. Zaher, K. Allah, R. Ahmed
Depletion of fossil fuel is the largest challenge facing human industrial and technological revolution in the current era. Exploration of widely distributed microorganisms for the production of renewable biofuel is the most priority for scientific research in the last decades. In this context, thirteen fungal isolates were collected from Tanta city, El-Gharbia Governorate, Egypt belonging to four genera (Aspergillus, Penicillium, Fusarium and Alternaria) were screened on minimal media for their ability to accumulate lipid in their biomass. The maximum lipid contents were 25.31% for Aspergillus versicolor and 20.15% for Aspergillus niveus. The optimization result showed that pH 4, incubation temperature 32°C, sucrose at concentration of 40g/L, glutamic acid at concentration of 0.5 g/L (C/N ratio at 40:0.5 w/w) after 5 days of incubation with agitation rate of 150 rpm on orbital shaker were the most appropriate conditions for the highest lipid accumulation in the case of Aspergillus versicolor. However, in case of Aspergillus niveus, pH 4, incubation temperature at 32°C, sucrose at concentration of 20 g/L, NaNO3 at concentration of 1.0 g/L (C/N ratio at 20:1.0 w/w) after 11 days of incubation with agitation rate of 150 rpm were the most appropriate for the highest lipid accumulation.
化石燃料的枯竭是当今时代人类工业和技术革命面临的最大挑战。探索广泛分布的微生物以生产可再生生物燃料是近几十年来科学研究的首要任务。在此背景下,从埃及El-Gharbia省Tanta市收集的13株真菌分离株属于4属(曲霉、青霉菌、镰刀菌和Alternaria),在最小培养基上筛选它们在生物量中积累脂质的能力。彩色曲霉和牛曲霉的最大脂质含量分别为25.31%和20.15%。优化结果表明:pH为4、培养温度为32℃、蔗糖浓度为40g/L、谷氨酸浓度为0.5 g/L (C/N比为40:0.5 w/w)、轨道摇床搅拌速度为150 rpm、培养5 d后,色曲霉脂质积累最高的最适宜条件为:蔗糖浓度为40g/L、谷氨酸浓度为0.5 g/L (C/N比为40:0.5 w/w)。而对于牛曲霉,pH为4,培养温度为32℃,蔗糖浓度为20 g/L, NaNO3浓度为1.0 g/L (C/N比为20:1 w/w),搅拌速度为150 rpm,培养11 d后脂质积累最高。
{"title":"Screening and optimization of some Egyptian soil-born fungi for lipids production as possible source for biofuel","authors":"A. Zeid, Eman E. Zaher, K. Allah, R. Ahmed","doi":"10.5455/egyjebb.20190709123823","DOIUrl":"https://doi.org/10.5455/egyjebb.20190709123823","url":null,"abstract":"Depletion of fossil fuel is the largest challenge facing human industrial and technological revolution in the current era. Exploration of widely distributed microorganisms for the production of renewable biofuel is the most priority for scientific research in the last decades. In this context, thirteen fungal isolates were collected from Tanta city, El-Gharbia Governorate, Egypt belonging to four genera (Aspergillus, Penicillium, Fusarium and Alternaria) were screened on minimal media for their ability to accumulate lipid in their biomass. The maximum lipid contents were 25.31% for Aspergillus versicolor and 20.15% for Aspergillus niveus. The optimization result showed that pH 4, incubation temperature 32°C, sucrose at concentration of 40g/L, glutamic acid at concentration of 0.5 g/L (C/N ratio at 40:0.5 w/w) after 5 days of incubation with agitation rate of 150 rpm on orbital shaker were the most appropriate conditions for the highest lipid accumulation in the case of Aspergillus versicolor. However, in case of Aspergillus niveus, pH 4, incubation temperature at 32°C, sucrose at concentration of 20 g/L, NaNO3 at concentration of 1.0 g/L (C/N ratio at 20:1.0 w/w) after 11 days of incubation with agitation rate of 150 rpm were the most appropriate for the highest lipid accumulation.","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"4 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87254320","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Taxol production by an endophytic fungus, Cladosporium and #8206; cladosporioides isolated from Catheranthus roseus 内生真菌枝孢菌和8206号生产紫杉醇的研究从玫瑰花中分离的枝孢子虫
Pub Date : 2019-01-01 DOI: 10.5455/EGYJEBB.20181122122145
Sabha Ahmed Al-Sabbagh, O. Eissa, M. Sallam
Different endopthytic fungi isolated from Catheranthus roseus were tested for their ability to produce Taxol. Taxol extracted from fermentation culture of the isolated fungus Cladosporium‎ cladosporioides was identified by UV, TLC, mass spectroscopy and HPLC. The isolated strain was identified as Cladosporium‎ cladosporioides based on morphological characteristics and the analysis of the 18S rDNA sequence. HPLC quantification of fungal Taxol showed that Cladosporium‎ cladosporioides was capable of producing 700µg/l of Taxol on potato dextrose broth. The optimum culture conditions for Taxol production by the isolated Cladosporium‎ cladosporioides were tested on M1D medium after 10 days of incubation at 25 °C, pH 5.5 in the presence of sucrose and ammonium tartrate as carbon and nitrogen sources respectively. Also different concentrations of benzoic acid, 4-hydroxy benzoic acid, vanadyl sulphate, serinol and salicylic acid were evaluated for their inducing activity on Taxol production by the isolated endophytic fungus. This study offers important information and a new source for the production of the important anticancer drug Taxol by endophytic fungus fermentation. The antitumor activity of fungal Taxol was tested against human tumor cell line HepG-2 (liver carcinoma) using in vitro clonogenic assays.
对从玫瑰花中分离的不同内生真菌产紫杉醇的能力进行了研究。采用紫外分光光度法、薄层色谱法、质谱法和高效液相色谱法对分离真菌Cladosporium cladosporioides发酵培养基中提取的紫杉醇进行了鉴定。根据形态特征和18S rDNA序列分析,鉴定该菌株为Cladosporium cladosporioides。菌株Cladosporium cladosporioides在马铃薯葡萄糖肉汤中可产生700µg/l的紫杉醇。在M1D培养基上,以蔗糖和酒石酸铵为碳源和氮源,在25℃、pH 5.5条件下培养10天后,对分离得到的枝孢枝孢子菌(Cladosporium cladosporioides)产紫杉醇的最佳培养条件进行了试验。考察了不同浓度的苯甲酸、4-羟基苯甲酸、硫酸钒酸、丝氨酸醇和水杨酸对分离的内生真菌生产紫杉醇的诱导活性。本研究为内生真菌发酵生产重要抗癌药物紫杉醇提供了重要信息和新的来源。采用体外克隆实验研究了紫杉醇真菌对人肝癌细胞株HepG-2的抗肿瘤活性。
{"title":"Taxol production by an endophytic fungus, Cladosporium and #8206; cladosporioides isolated from Catheranthus roseus","authors":"Sabha Ahmed Al-Sabbagh, O. Eissa, M. Sallam","doi":"10.5455/EGYJEBB.20181122122145","DOIUrl":"https://doi.org/10.5455/EGYJEBB.20181122122145","url":null,"abstract":"Different endopthytic fungi isolated from Catheranthus roseus were tested for their ability to produce Taxol. Taxol extracted from fermentation culture of the isolated fungus Cladosporium‎ cladosporioides was identified by UV, TLC, mass spectroscopy and HPLC. The isolated strain was identified as Cladosporium‎ cladosporioides based on morphological characteristics and the analysis of the 18S rDNA sequence. HPLC quantification of fungal Taxol showed that Cladosporium‎ cladosporioides was capable of producing 700µg/l of Taxol on potato dextrose broth. The optimum culture conditions for Taxol production by the isolated Cladosporium‎ cladosporioides were tested on M1D medium after 10 days of incubation at 25 °C, pH 5.5 in the presence of sucrose and ammonium tartrate as carbon and nitrogen sources respectively. Also different concentrations of benzoic acid, 4-hydroxy benzoic acid, vanadyl sulphate, serinol and salicylic acid were evaluated for their inducing activity on Taxol production by the isolated endophytic fungus. This study offers important information and a new source for the production of the important anticancer drug Taxol by endophytic fungus fermentation. The antitumor activity of fungal Taxol was tested against human tumor cell line HepG-2 (liver carcinoma) using in vitro clonogenic assays.","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"35 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75090750","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessment of contribution of allelospoly and allelopathy to interference of Medicago sativa with Raphanus sativus 化感性和化感作用对紫花苜蓿与莴苣干扰的贡献评价
Pub Date : 2019-01-01 DOI: 10.5455/EGYJEBB.20190628044001
S. Darier, Eman T El Kenany, Esraa Fawzy
A simple mathematical model was applied to assess the magnitude of contributions of allelospoly (competition on resources and energy) and allelopathy (secretion of biochemical) to interference against Raphanus sativus by Medicago sativa. The seedling growth of R. sativus (plumule and radicle lengths) are significantly (P ≤ 0.05) affected by allelochemicals extracted from M. sativa. Competitive interference by M. sativa was eliminated and there were high coefficient of determination (R²) values in dry weight of shoot and root of R. sativus. In other experiment, an equivalent amount of allelopathic effect to that involved in the interference was added, not eliminated. Split-plot designs were used with three replicates. The main-plot factors were three mixtures and the sub-plot factors were: without interference, with interference, and with interference plus allelopathic effects. The reduction in shoot and root dry weight of R. sativus in mixed culture treated with the extract was mainly ascribed to allelopathy. The results suggested that the complex effect of both components of interference (allelopathy and allelospoly) on the protein profile of the recipient species, and confirms the modeling results. Meanwhile, allelospoly exhibited only a physical effect which can be evaluated through the growth parameters.
利用一个简单的数学模型,评价了化感作用(化感作用)和化感作用(化感作用)对紫花苜蓿(Medicago sativus)拮抗的贡献程度。化感化学物质对小白菜幼苗生长(胚轴和胚根长度)有显著影响(P≤0.05)。消除了苜蓿的竞争干扰,地上部和根部干重的决定系数(R²)值较高。在另一项实验中,加入了与干扰等量的化感效应,而不是消除。采用分图设计,共3个重复。主样地因子为3种混合,次样地因子为无干扰、有干扰、有干扰加化感作用。在混合栽培条件下,红花茎部和根部干重的减少主要归因于化感作用。结果表明,化感作用(化感作用)和化感作用(化感作用)对受体物种的蛋白质谱有复杂的影响,并证实了模型的结果。与此同时,化等位孢只表现出一种物理效应,可以通过生长参数来评价。
{"title":"Assessment of contribution of allelospoly and allelopathy to interference of Medicago sativa with Raphanus sativus","authors":"S. Darier, Eman T El Kenany, Esraa Fawzy","doi":"10.5455/EGYJEBB.20190628044001","DOIUrl":"https://doi.org/10.5455/EGYJEBB.20190628044001","url":null,"abstract":"A simple mathematical model was applied to assess the magnitude of contributions of allelospoly (competition on resources and energy) and allelopathy (secretion of biochemical) to interference against Raphanus sativus by Medicago sativa. The seedling growth of R. sativus (plumule and radicle lengths) are significantly (P ≤ 0.05) affected by allelochemicals extracted from M. sativa. Competitive interference by M. sativa was eliminated and there were high coefficient of determination (R²) values in dry weight of shoot and root of R. sativus. In other experiment, an equivalent amount of allelopathic effect to that involved in the interference was added, not eliminated. Split-plot designs were used with three replicates. The main-plot factors were three mixtures and the sub-plot factors were: without interference, with interference, and with interference plus allelopathic effects. The reduction in shoot and root dry weight of R. sativus in mixed culture treated with the extract was mainly ascribed to allelopathy. The results suggested that the complex effect of both components of interference (allelopathy and allelospoly) on the protein profile of the recipient species, and confirms the modeling results. Meanwhile, allelospoly exhibited only a physical effect which can be evaluated through the growth parameters.","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"31 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82897967","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Functional properties and medical benefits of pomegranate (Punica granatum L.) peels as agro-industrial wastes 作为农工废弃物的石榴果皮的功能特性及药用价值
Pub Date : 2019-01-01 DOI: 10.5455/egyjebb.20191130124643
M. Nour
{"title":"Functional properties and medical benefits of pomegranate (Punica granatum L.) peels as agro-industrial wastes","authors":"M. Nour","doi":"10.5455/egyjebb.20191130124643","DOIUrl":"https://doi.org/10.5455/egyjebb.20191130124643","url":null,"abstract":"","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"55 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76313545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Drought and Salinity Alter Adaptive Molecular Response in Two Genetically unlike Egyptian Rice Cultivars 干旱和盐度改变了两个遗传上不同的埃及水稻品种的适应性分子反应
Pub Date : 2019-01-01 DOI: 10.5455/egyjebb.20190619110050
Mohamed Y. Hazman, M. Sameh, Menna Mahmoud Abd Elzaher, N. Mohamed, Nada Essam El din Diab, N. Mikhael, Nora Ashraf Hussin, Nourhan A. Helmy, S.E.N. Mohamed
Egypt, the largest rice producer in the near east and North Africa, reached the point where the insufficient irrigation water (drought) and its low quality (saline) imposed serious limitations on rice production. Understanding molecular adaptive mechanisms through studying the expression profile of wide range of different stress-marker genes can consolidate breeding programs aimed to develop certain rice varieties capable of fitting in challenging agro-ecosystems. Rice is notoriously sensitive to drought and salinity but there is variation within examined rice varieties represented in two genetically unlike Egyptian rice commercial cultivars: Sakha 106 (Japonica) and Giza 179 (Indica/Japonica). The two Egyptian rice genotypes were submitted to osmotically equivalent doses of drought (mimicked by mannitol) and/or salinity (triggered by NaCl). The observed significant alternations in the transcriptional response among 14 stress-related genes displayed a genotype dependent and stress specific pattern. The expected knowledge might enhance the background about how rice plants differ in sensing and restoring its adaptive mechanisms in response to drought and salinity, two kind of stresses that frequently co-occur in the Egyptian agricultural environment. KEYWORDS: Rice, drought, salinity, japonica, indica, stress-marker genes, quantitative PCR
埃及是近东和北非最大的稻米生产国,但由于灌溉用水不足(干旱)和水质低(含盐),稻米生产受到严重限制。通过研究各种不同胁迫标记基因的表达谱来了解分子适应机制,可以巩固育种计划,旨在开发能够适应具有挑战性的农业生态系统的某些水稻品种。众所周知,水稻对干旱和盐度非常敏感,但在被检测的水稻品种中,有两种遗传上不同的埃及水稻商业品种:Sakha 106(粳稻)和Giza 179(籼稻/粳稻)。将这两种埃及水稻基因型置于渗透性相同剂量的干旱(由甘露醇模拟)和/或盐度(由NaCl触发)下。结果表明,14个胁迫相关基因的转录反应具有基因型依赖性和胁迫特异性。预期的知识可能会加强水稻植物如何在感知和恢复其适应机制方面的差异,以应对干旱和盐度,这两种胁迫经常在埃及农业环境中同时发生。关键词:水稻,干旱,盐度,粳稻,籼稻,胁迫标记基因,定量PCR
{"title":"Drought and Salinity Alter Adaptive Molecular Response in Two Genetically unlike Egyptian Rice Cultivars","authors":"Mohamed Y. Hazman, M. Sameh, Menna Mahmoud Abd Elzaher, N. Mohamed, Nada Essam El din Diab, N. Mikhael, Nora Ashraf Hussin, Nourhan A. Helmy, S.E.N. Mohamed","doi":"10.5455/egyjebb.20190619110050","DOIUrl":"https://doi.org/10.5455/egyjebb.20190619110050","url":null,"abstract":"Egypt, the largest rice producer in the near east and North Africa, reached the point where the insufficient irrigation water (drought) and its low quality (saline) imposed serious limitations on rice production. Understanding molecular adaptive mechanisms through studying the expression profile of wide range of different stress-marker genes can consolidate breeding programs aimed to develop certain rice varieties capable of fitting in challenging agro-ecosystems. Rice is notoriously sensitive to drought and salinity but there is variation within examined rice varieties represented in two genetically unlike Egyptian rice commercial cultivars: Sakha 106 (Japonica) and Giza 179 (Indica/Japonica). The two Egyptian rice genotypes were submitted to osmotically equivalent doses of drought (mimicked by mannitol) and/or salinity (triggered by NaCl). The observed significant alternations in the transcriptional response among 14 stress-related genes displayed a genotype dependent and stress specific pattern. The expected knowledge might enhance the background about how rice plants differ in sensing and restoring its adaptive mechanisms in response to drought and salinity, two kind of stresses that frequently co-occur in the Egyptian agricultural environment. KEYWORDS: Rice, drought, salinity, japonica, indica, stress-marker genes, quantitative PCR","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"20 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78578535","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Detection of sequence mutations in phenylalanine hydroxylase (PAH) gene isolated from Egyptian Phenylketonuria (PKU) patients 埃及苯丙酮尿症(PKU)患者苯丙氨酸羟化酶(PAH)基因序列突变检测
Pub Date : 2019-01-01 DOI: 10.5455/egyjebb.20190804010102
Ghada Shebl, H. S. Ahmed, A. Kato, H. Dawoud, M. Hamza, A. Haider
Phenylketonuria (PKU) is a relatively common autosomal recessive disorder. The frequency of PKU among Caucasians populations is approximately 1:10.000. PKU is primarily a consequence of a deficiency in phenylalanine hydroxylase (PAH) activity, and un-treated PKU patients develop severe mental retardation. The absence of this enzymatic activity causes disturbances in tyrosine and tryptophan metabolism and diminished formation of catecholamine (dopamine), melanin and serotonin. In the present study, nucleotide sequence mutations were examined and detected in Egyptian phenylketonuria (PKU) patients. Total genomic DNA was extracted from the blood of six PKU patients and specific PAH primers were used to amplify genomic DNA fragments. Nucleotide sequences were processed using Human Splicing Finder software to remove introns and predict cDNAs. Processed cDNA sequences were aligned with reference sequence in the GenBank and healthy control for detection of mutations. The results indicated different sequence polymorphism, which can cause mild or severe mutations. The severity of sequence mutation was correlated with the accumulation of phenylalanine amino acid in the blood. This study is an attempt to early detection of PAH mutations, to control phenylketonuria genetic disorder in Egyptian population.
苯丙酮尿症(PKU)是一种较为常见的常染色体隐性遗传病。在高加索人群中,PKU的发病率约为1:10 000。PKU主要是苯丙氨酸羟化酶(PAH)活性缺乏的结果,未经治疗的PKU患者会出现严重的智力迟钝。缺乏这种酶活性会导致酪氨酸和色氨酸代谢紊乱,儿茶酚胺(多巴胺)、黑色素和血清素的形成减少。在本研究中,对埃及苯丙酮尿症(PKU)患者的核苷酸序列突变进行了检测。从6例PKU患者的血液中提取总基因组DNA,并使用特异性PAH引物扩增基因组DNA片段。使用Human Splicing Finder软件处理核苷酸序列以去除内含子并预测cdna。处理后的cDNA序列与GenBank和健康对照中的参考序列比对,用于检测突变。结果表明,不同的序列多态性可引起轻微或严重的突变。序列突变的严重程度与血液中苯丙氨酸的积累有关。本研究旨在早期检测多环芳烃突变,控制埃及人群的苯丙酮尿遗传疾病。
{"title":"Detection of sequence mutations in phenylalanine hydroxylase (PAH) gene isolated from Egyptian Phenylketonuria (PKU) patients","authors":"Ghada Shebl, H. S. Ahmed, A. Kato, H. Dawoud, M. Hamza, A. Haider","doi":"10.5455/egyjebb.20190804010102","DOIUrl":"https://doi.org/10.5455/egyjebb.20190804010102","url":null,"abstract":"Phenylketonuria (PKU) is a relatively common autosomal recessive disorder. The frequency of PKU among Caucasians populations is approximately 1:10.000. PKU is primarily a consequence of a deficiency in phenylalanine hydroxylase (PAH) activity, and un-treated PKU patients develop severe mental retardation. The absence of this enzymatic activity causes disturbances in tyrosine and tryptophan metabolism and diminished formation of catecholamine (dopamine), melanin and serotonin. In the present study, nucleotide sequence mutations were examined and detected in Egyptian phenylketonuria (PKU) patients. Total genomic DNA was extracted from the blood of six PKU patients and specific PAH primers were used to amplify genomic DNA fragments. Nucleotide sequences were processed using Human Splicing Finder software to remove introns and predict cDNAs. Processed cDNA sequences were aligned with reference sequence in the GenBank and healthy control for detection of mutations. The results indicated different sequence polymorphism, which can cause mild or severe mutations. The severity of sequence mutation was correlated with the accumulation of phenylalanine amino acid in the blood. This study is an attempt to early detection of PAH mutations, to control phenylketonuria genetic disorder in Egyptian population.","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"38 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"77593655","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Antimicrobial Activity and Bio-active compounds analysis in Ethanolic plant extracts of Punica Grantanum (Pomegranate) using GC-MS GC-MS法分析石榴醇提取物的抑菌活性及活性成分
Pub Date : 2019-01-01 DOI: 10.5455/egyjebb.20190707112923
E. Attia
Medicinal plants are considered a bountiful origin of antimicrobial compounds. Punica granatum commonly known as pomegranate has developed as a medicinal plant with a possibility of antimicrobial activity. So, this study aimed to First:-Extract the antimicrobial components from Pomegranate peel by 95% ethanol and then determine their in vitro effects against some clinical pathogenic bacteria and fungi. The clinical isolates were obtained from the National Research Center in Dokki, and Intensive Care Units (Ismailia), Suez Canal University Hospital. Second: - Study the chemical composition of the peel extract by GC –MS chromatogram (Phytochemical analysis). By using the diffusion agar method, Punica granatum ethanolic extract used with different concentrations (10, 20, 30,40) mg/well against the studied pathogenic bacteria and fungi. These different concentrations were highly active against pathogenic bacteria like Staphylococcus aureus ATCC29213 and Klebsiella pneumonia ATCC13883. However, not active against the pathogenic fungi Aspergillus niger, Candida albicans ATCC10231, and Candida pelliculosa MH248066. Different concentrations of Punica granatum ethanolic extract (200,400,600.800) mg/well gave marked inhibition against all the tested fungal species. The zone of inhibition was compared with different standard antimicrobial agents as Streptomycin and Rifampin for bacteria, Amphotericin B and fluconazole for fungi as a positive control. Forty bioactive phytochemical compounds were identified in the Ethanolic extract of Punica Granatum by GC-MS method based on the peak area, molecular weight and retention time. Among forty compounds identified, only fourteen were reported to have biological activities. Our results indicate that Punica granatum contains various bioactive components
药用植物被认为是抗菌化合物的丰富来源。石榴(Punica granatum)俗称石榴,已发展成为一种具有抗菌活性的药用植物。为此,本研究首先:用95%乙醇提取石榴皮中的抗菌成分,并测定其对临床病原菌和真菌的体外抑制作用。临床分离株来自Dokki国家研究中心和苏伊士运河大学医院重症监护病房(Ismailia)。第二:-通过GC - MS色谱(植物化学分析)研究果皮提取物的化学成分。采用扩散琼脂法,用不同浓度(10、20、30、40)mg/孔的石榴醇提取物对所研究的病原菌和真菌进行抑菌试验。这些不同浓度对金黄色葡萄球菌ATCC29213和肺炎克雷伯菌ATCC13883等致病菌具有高度活性。但对黑曲霉、白色念珠菌ATCC10231和皮膜念珠菌MH248066等致病性真菌无活性。不同浓度石榴醇提物(200,400,600,800 mg/well)对真菌均有明显的抑制作用。以细菌用链霉素和利福平,真菌用两性霉素B和氟康唑为阳性对照,比较不同标准抗菌药物的抑菌带。采用气相色谱-质谱联用方法,根据峰面积、分子量和保留时间等指标,从石榴醇提物中鉴定出40种具有生物活性的化合物。在已鉴定的40种化合物中,据报道只有14种具有生物活性。结果表明,石榴中含有多种生物活性成分
{"title":"Antimicrobial Activity and Bio-active compounds analysis in Ethanolic plant extracts of Punica Grantanum (Pomegranate) using GC-MS","authors":"E. Attia","doi":"10.5455/egyjebb.20190707112923","DOIUrl":"https://doi.org/10.5455/egyjebb.20190707112923","url":null,"abstract":"Medicinal plants are considered a bountiful origin of antimicrobial compounds. Punica granatum commonly known as pomegranate has developed as a medicinal plant with a possibility of antimicrobial activity. So, this study aimed to First:-Extract the antimicrobial components from Pomegranate peel by 95% ethanol and then determine their in vitro effects against some clinical pathogenic bacteria and fungi. The clinical isolates were obtained from the National Research Center in Dokki, and Intensive Care Units (Ismailia), Suez Canal University Hospital. Second: - Study the chemical composition of the peel extract by GC –MS chromatogram (Phytochemical analysis). By using the diffusion agar method, Punica granatum ethanolic extract used with different concentrations (10, 20, 30,40) mg/well against the studied pathogenic bacteria and fungi. These different concentrations were highly active against pathogenic bacteria like Staphylococcus aureus ATCC29213 and Klebsiella pneumonia ATCC13883. However, not active against the pathogenic fungi Aspergillus niger, Candida albicans ATCC10231, and Candida pelliculosa MH248066. Different concentrations of Punica granatum ethanolic extract (200,400,600.800) mg/well gave marked inhibition against all the tested fungal species. The zone of inhibition was compared with different standard antimicrobial agents as Streptomycin and Rifampin for bacteria, Amphotericin B and fluconazole for fungi as a positive control. Forty bioactive phytochemical compounds were identified in the Ethanolic extract of Punica Granatum by GC-MS method based on the peak area, molecular weight and retention time. Among forty compounds identified, only fourteen were reported to have biological activities. Our results indicate that Punica granatum contains various bioactive components","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"17 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80023184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Feasibility of microalgae culturing on Dairy waste for biodiesel production 乳品废弃物培养微藻生产生物柴油的可行性
Pub Date : 2019-01-01 DOI: 10.5455/egyjebb.20190804100423
Fatma Elzahraa Taofik Zaky, E. Shabana, Hanaa Sayed Shalaby
Recently Biodiesel has a lot of concerns by number of researchers , due to its environmental benefits, a renewable energy resource, could replace fossil fuels, and the fact that lack of fossil fuels has become imminent. The cost of biodiesel production is the main barrier. The objectives of the present study was economic mass production of microalgae growing on dairy waste (sweet whey ) for lipid accumulation. The obtained data revealed that diluted waste (50%), when compared with (BBM) medium was a promising alternative medium for cultivating of microalgae Anabaena oryzae, Chlorella vulgaris and mixture of both. While the difference in (chlorophyll a and dry weight) obtained from 50 % waste and BBM cultures of all tested organisms was insignificant, the lipid percentage increased by (29.3,13.4 and 16.5 % ) in Anabaena, Chlorella and their mixture respectively, compared with corresponding control cultures. Maximum lipid productivity of Anabaena, Chlorella and their mixture was (2.03, 5.78 and 4.88 mg/l/day). Role of microalgae in biological treatment of waste was noticeable, whereas reduction in all tested parameters (TSS, TDS, COD, TN, NH3, NO3 and P) was recorded. Extracted oil was esterified and analyzed using GC-Ms analysis. The predicted biodiesel properties using obtained fatty acid profile promised with good clean biodiesel meet international qualities of biodiesel
生物柴油作为一种具有环境效益的可再生能源,可以替代化石燃料,近年来受到许多研究者的关注,化石燃料短缺的事实已经迫在眉睫。生物柴油的生产成本是主要障碍。本研究的目的是经济批量生产微藻生长在乳废物(甜乳清)脂质积累。结果表明,与(BBM)培养基相比,50%的稀释废液是一种很有前途的培养米水藻(Anabaena oryzae)、小球藻(Chlorella vulgaris)及两者混合培养的培养基。所有被试生物的50%废物和BBM培养物的叶绿素a和干重差异不显著,但与对照培养物相比,水藻、小球藻及其混合物的脂质百分比分别提高了29.3%、13.4%和16.5%。水藻、小球藻及其混合物的最大产脂率分别为2.03、5.78和4.88 mg/l/d。微藻在生物处理废物中的作用是显著的,所有测试参数(TSS、TDS、COD、TN、NH3、NO3和P)均有降低。提取油进行酯化,GC-Ms分析。利用所得的脂肪酸谱预测了生物柴油的性能,表明该生物柴油具有良好的清洁性能,符合国际生物柴油的标准
{"title":"Feasibility of microalgae culturing on Dairy waste for biodiesel production","authors":"Fatma Elzahraa Taofik Zaky, E. Shabana, Hanaa Sayed Shalaby","doi":"10.5455/egyjebb.20190804100423","DOIUrl":"https://doi.org/10.5455/egyjebb.20190804100423","url":null,"abstract":"Recently Biodiesel has a lot of concerns by number of researchers , due to its environmental benefits, a renewable energy resource, could replace fossil fuels, and the fact that lack of fossil fuels has become imminent. The cost of biodiesel production is the main barrier. The objectives of the present study was economic mass production of microalgae growing on dairy waste (sweet whey ) for lipid accumulation. The obtained data revealed that diluted waste (50%), when compared with (BBM) medium was a promising alternative medium for cultivating of microalgae Anabaena oryzae, Chlorella vulgaris and mixture of both. While the difference in (chlorophyll a and dry weight) obtained from 50 % waste and BBM cultures of all tested organisms was insignificant, the lipid percentage increased by (29.3,13.4 and 16.5 % ) in Anabaena, Chlorella and their mixture respectively, compared with corresponding control cultures. Maximum lipid productivity of Anabaena, Chlorella and their mixture was (2.03, 5.78 and 4.88 mg/l/day). Role of microalgae in biological treatment of waste was noticeable, whereas reduction in all tested parameters (TSS, TDS, COD, TN, NH3, NO3 and P) was recorded. Extracted oil was esterified and analyzed using GC-Ms analysis. The predicted biodiesel properties using obtained fatty acid profile promised with good clean biodiesel meet international qualities of biodiesel","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"47 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83960532","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Morphological and molecular phenetics on some taxa of family Araceae 天南星科某些分类群的形态与分子表型
Pub Date : 2019-01-01 DOI: 10.5455/EGYJEBB.20190602120328
Neveen Sadik, U. Hameed, Salma Ghany, M. Ibrahim, M. Tantawy
Araceae is a large and ancient monocot family most notable for its impressive morphological diversity. The current work included the investigation of morphological criteria of some taxa of Araceae viz. whole plant, leaf architecture, stomatography (LM & SEM) leaf, petiole and stem in addition to molecular criteria (RAPD) to throw light on the taxonomic importance of these characters. The amalgamated character states Viz. morphological (269 attributes) and molecular (149 bands) of total (418 attributes) of the studied taxa were phenetically analyzed by aid of NTSys-pc software (version 2.02). The generated phenogram expressed the similarities/dissimilarities among the present taxa. The interrelationships at specific level were discussed and aligned with some of the classification systems. The target of the coducted study is trying to explore the phenetic inter-specific relations among the taxa under study through the sharing of morphological and molecular characters in addition to the assessment of such characters. The combined morphological and molecular criteria segregated Alocasia odora away from the remainings and grouped Philodendron erubescens, Scindapsus aureus and Spathiphyllum walisii in distinct group while the remaining six in another distinct one.
天南星科是一个大而古老的单子叶科,以其令人印象深刻的形态多样性而闻名。目前的工作包括对天南星科部分分类群的形态学标准(全株)、叶结构、气孔学(LM & SEM)、叶、叶柄和茎的研究,以及分子标准(RAPD)的研究,以阐明这些特征在分类上的重要性。利用NTSys-pc软件(2.02版)对所研究分类群的形态(269个属性)和分子(149个带)混合性状进行了遗传分析。生成的物候图表达了本类群间的异同。讨论了在特定层次上的相互关系,并与一些分类系统保持一致。本研究的目的是通过形态和分子特征的共享,以及对这些特征的评价,来探索所研究分类群之间的种间关系。结合形态和分子标准,将Alocasia odora从残株中分离出来,将Philodendron erubescens、Scindapsus aureus和Spathiphyllum walisii归为一个单独的类群,其余6株归为另一个单独的类群。
{"title":"Morphological and molecular phenetics on some taxa of family Araceae","authors":"Neveen Sadik, U. Hameed, Salma Ghany, M. Ibrahim, M. Tantawy","doi":"10.5455/EGYJEBB.20190602120328","DOIUrl":"https://doi.org/10.5455/EGYJEBB.20190602120328","url":null,"abstract":"Araceae is a large and ancient monocot family most notable for its impressive morphological diversity. The current work included the investigation of morphological criteria of some taxa of Araceae viz. whole plant, leaf architecture, stomatography (LM & SEM) leaf, petiole and stem in addition to molecular criteria (RAPD) to throw light on the taxonomic importance of these characters. The amalgamated character states Viz. morphological (269 attributes) and molecular (149 bands) of total (418 attributes) of the studied taxa were phenetically analyzed by aid of NTSys-pc software (version 2.02). The generated phenogram expressed the similarities/dissimilarities among the present taxa. The interrelationships at specific level were discussed and aligned with some of the classification systems. The target of the coducted study is trying to explore the phenetic inter-specific relations among the taxa under study through the sharing of morphological and molecular characters in addition to the assessment of such characters. The combined morphological and molecular criteria segregated Alocasia odora away from the remainings and grouped Philodendron erubescens, Scindapsus aureus and Spathiphyllum walisii in distinct group while the remaining six in another distinct one.","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"51 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88149846","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Isolation, optimization and production of antimicrobial agent from a novel producer Bacillus badius strain AAUM 新型病原菌坏芽孢杆菌AAUM的分离、优化及抗菌剂的生产
Pub Date : 2019-01-01 DOI: 10.5455/egyjebb.20190407015126
A. Farag, A. Mohammed, M. Afifi, Usama M. Abdel Raouf
Eighteen bacterial strains were isolated from Sea water collected from different sites of Red Sea, Egypt. They were screened for antagonistic activity against many bacterial pathogens. The most active antimicrobial producer (R6) which isolated from Safaga middle was identified as Bacillus badius strain AAUM using 16S rRNA phylogenetic analysis. The most control variables were selected from Plackett–Burman (PB) factorial design for the production of antimicrobial agent from Bacillus badius strain AAUM. It achieved 1.56-fold fold increase (against S. aureus) when grown in medium composed of g/l: peptone, 2.5; yeast extract, 5.0; sea water, 25ml; size of inoculum (3ml/50ml), adjusted to pH 9 and incubation period 20 hrs at 45oC. Immobilization using entrapment and adsorption techniques were applied to improve the productivity of cells. B. badius strain AAUM adsorbed on polyurethane foam realized 1.4-fold increase than the free cells. Reused of the adsorbed culture caused an increase of antimicrobial agent production by 1.14-fold than the free cells. The predicted crude antimicrobial spectra suggested that the B. badius strain AAUM can produce important and novel antimicrobial drugs.
从埃及红海不同地点采集的海水中分离出18株细菌。筛选了它们对多种致病菌的拮抗活性。通过16S rRNA系统发育分析,从萨法加中部分离得到的最具活性的抑菌菌R6为坏芽孢杆菌AAUM菌株。采用Plackett-Burman (PB)析因设计对病原菌AAUM的抑菌效果进行控制。在由g/l蛋白胨组成的培养基中生长时,达到1.56倍(相对于金黄色葡萄球菌);酵母浸膏,5.0;海水25ml;接种量(3ml/50ml),调整至pH 9, 45℃孵育20小时。利用包埋和吸附技术进行固定化以提高细胞的生产率。吸附在聚氨酯泡沫上的B. badius菌株AAUM比游离细胞增加了1.4倍。吸附培养物的重复利用使抗菌剂产量比游离细胞增加1.14倍。预测的粗抗菌谱表明,该菌株可生产重要的新型抗菌药物。
{"title":"Isolation, optimization and production of antimicrobial agent from a novel producer Bacillus badius strain AAUM","authors":"A. Farag, A. Mohammed, M. Afifi, Usama M. Abdel Raouf","doi":"10.5455/egyjebb.20190407015126","DOIUrl":"https://doi.org/10.5455/egyjebb.20190407015126","url":null,"abstract":"Eighteen bacterial strains were isolated from Sea water collected from different sites of Red Sea, Egypt. They were screened for antagonistic activity against many bacterial pathogens. The most active antimicrobial producer (R6) which isolated from Safaga middle was identified as Bacillus badius strain AAUM using 16S rRNA phylogenetic analysis. The most control variables were selected from Plackett–Burman (PB) factorial design for the production of antimicrobial agent from Bacillus badius strain AAUM. It achieved 1.56-fold fold increase (against S. aureus) when grown in medium composed of g/l: peptone, 2.5; yeast extract, 5.0; sea water, 25ml; size of inoculum (3ml/50ml), adjusted to pH 9 and incubation period 20 hrs at 45oC. Immobilization using entrapment and adsorption techniques were applied to improve the productivity of cells. B. badius strain AAUM adsorbed on polyurethane foam realized 1.4-fold increase than the free cells. Reused of the adsorbed culture caused an increase of antimicrobial agent production by 1.14-fold than the free cells. The predicted crude antimicrobial spectra suggested that the B. badius strain AAUM can produce important and novel antimicrobial drugs.","PeriodicalId":22404,"journal":{"name":"THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)","volume":"7 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89737115","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
期刊
THE EGYPTIAN JOURNAL OF EXPERIMENTAL BIOLOGY (Botany)
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1