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Organelle Proximity Analysis for Enhanced Quantification of Mitochondria–Endoplasmic Reticulum Interactions in Single Cells via Super-Resolution Microscopy 通过超分辨率显微镜对单细胞中线粒体-内质网相互作用进行增强定量的细胞器邻近性分析
IF 7.4 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-03 DOI: 10.1021/acs.analchem.4c02338
Yucheng Sun, Shiyu Chen, Ying Hou, Seong Ho Kang, Jin-Ming Lin
Mitochondria (MT) and the endoplasmic reticulum (ER) maintain lipid and calcium homeostasis through membrane contacts, particularly MT–ER contacts (MERCs), spanning distances from 10 to 50 nm. However, the variation of different distance ranges and the metabolic factors influencing this variation remain poorly understood. This study employed microfluidic chip-based super-resolution microscopy in conjunction with a Moore-Neighbor tracing-incorporated organelle proximity analysis algorithm. This approach enabled precise three-dimensional localization of single-fluorescence protein molecules within narrow and irregular membrane proximities. It achieved lateral localization precision of less than 20 nm, resulting in a minimum MERC distance of approximately 8 nm in spatial and mean distances across multiple threshold ranges. Additionally, we demonstrated that the MERC distance variation was correlated with MT size rather than ER width. The proportion of each distance range varied significantly after the stimuli. Free cholesterol showed a negative correlation with various distances, while distances of 10–30 nm were associated with glucose, glutamine, and pyruvic acid. Furthermore, the 30–40 nm range was influenced by citric acid. These results underscore the role of advanced subcellular organelle analysis in elucidating the single-molecule behavior and organelle morphology in single-cell studies.
线粒体(MT)和内质网(ER)通过膜接触,特别是MT-ER接触(MERC),维持脂质和钙的平衡,其距离从10纳米到50纳米不等。然而,人们对不同距离范围的变化以及影响这种变化的代谢因素仍然知之甚少。这项研究采用了基于微流控芯片的超分辨率显微镜技术,并结合了摩尔-邻近追踪-纳入细胞器邻近性分析算法。这种方法能够在狭窄和不规则的膜邻近区域内对单荧光蛋白质分子进行精确的三维定位。它的横向定位精度小于 20 nm,在多个阈值范围内,MERC 的最小空间距离和平均距离约为 8 nm。此外,我们还证明了 MERC 距离变化与 MT 大小而非 ER 宽度相关。在刺激后,每个距离范围的比例都有显著变化。游离胆固醇与各种距离呈负相关,而 10-30 nm 的距离则与葡萄糖、谷氨酰胺和丙酮酸相关。此外,30-40 nm 范围受到柠檬酸的影响。这些结果凸显了先进的亚细胞器分析在单细胞研究中阐明单分子行为和细胞器形态的作用。
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引用次数: 0
19F NMR Probes: Molecular Logic Material Implications for the Anion Discrimination and Chemodosimetric Approach for Selective Detection of H2O2. 19F NMR 探针:选择性检测 H2O2 的阴离子辨别和化学计量法的分子逻辑材料含义。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-03 DOI: 10.1021/acs.analchem.4c00735
Upendar Reddy Gandra, Jörg Axthelm, Peter Bellstedt, Akanksha Singh, Alexander Schiller, M Infas H Mohideen, Amal Kumar Mandal

Detection and discrimination of similar solvation energies of bioanalytes are vital in medical and practical applications. Currently, various advanced techniques are equipped to recognize these crucial bioanalytes. Each strategy has its own benefits and limitations. One-dimensional response, lack of discrimination power for anions, and reactive oxygen species (ROS) generally limit the utilized fluorescent probe. Therefore, a cutting-edge, refined method is expected to conquer these limitations. The use of 19F NMR spectroscopy for detecting and discriminating essential analytes in practical applications is an emerging technique. As an alternative strategy, we report two fluorinated boronic acid-appended pyridinium salts 5-F-o-BBBpy (1) and 5-CF3-o-BBBpy (2). Probe (1) acts as a chemosensor for identifying and discriminating inorganic anions with similar solvation energies with strong bidirectional 19F shifts in the lower ppm range. Probe (2) turns as a chemo dosimeter for the selective detection and precise quantification of hydrogen peroxide (H2O2) among other competing ROS. To demonstrate real-life applicability, we successfully quantified H2O2 via probe (2) in different pharmaceutical, dental, and cosmetic samples. We found that tuning the -F/-CF3 moiety to the arene boronic acid enables the π-conjugation, a crucial prerequisite for the discrimination of anions and H2O2. Characteristic 19F NMR fingerprints in the presence of anions revealed a complementary implication (IMP)/not implication (NIMP) logic function. Finally, the 16 distinct binary Boolean operations on two logic values are defined for "functional completeness" using the special property of the IMP gate. Boolean logic's ability to handle information by utilizing characteristic 19F NMR fingerprints has not been seen previously in a single chemical platform for detecting and differentiating such anions.

检测和分辨生物分析物的相似溶解能在医疗和实际应用中至关重要。目前,有多种先进技术可用于识别这些重要的生物分析物。每种方法都有其优点和局限性。一维响应、缺乏对阴离子和活性氧(ROS)的分辨能力通常会限制所使用的荧光探针。因此,一种先进、精细的方法有望克服这些限制。在实际应用中,使用 19F NMR 光谱检测和鉴别基本分析物是一项新兴技术。作为一种替代策略,我们报告了两种氟化硼酸添加的吡啶鎓盐 5-F-o-BBBpy (1) 和 5-CF3-o-BBBpy (2)。探针(1)是一种化学传感器,用于识别和区分具有相似溶解能的无机阴离子,在较低的 ppm 范围内具有较强的 19F 双向位移。探针(2)可作为化学剂量计,在其他竞争性 ROS 中选择性地检测和精确定量过氧化氢(H2O2)。为了证明探针 (2) 在实际生活中的适用性,我们通过探针 (2) 在不同的药物、牙科和化妆品样品中成功地量化了 H2O2。我们发现,将 -F/-CF3 分子与硼酸炔调谐可实现 π 键合,这是区分阴离子和 H2O2 的关键前提。阴离子存在时的特征性 19F NMR 指纹揭示了互补蕴涵(IMP)/非蕴涵(NIMP)逻辑功能。最后,利用 IMP 逻辑门的特殊属性,对两个逻辑值的 16 个不同的二进制布尔运算进行了 "功能完备性 "定义。布尔逻辑通过利用特征 19F NMR 指纹来处理信息的能力,是以前在单一化学平台上检测和区分此类阴离子时从未见过的。
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引用次数: 0
Correction to "Rapid Sample Pretreatment Facilitating SERS Detection of Trace Weak Organic Acids/Bases in Simple Matrices". 更正 "快速样品预处理促进 SERS 检测简单基质中的痕量弱有机酸/碱"。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-03 DOI: 10.1021/acs.analchem.4c03303
Jing Xu, Lifang Xie, Minghuai Zhu, Chenru Xiong, Qiuting Huang, Mingzhi Zhang, Bin Ren, Zhongqun Tian, Guokun Liu
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引用次数: 0
NMR-Based Chiral Discrimination of Bulky Amines with a 19F-Tagged NNO Pincer Complex. 利用 19F 标记的 NNO 钳子复合物对稠密胺进行基于 NMR 的手性鉴别。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-03 DOI: 10.1021/acs.analchem.4c01748
Wenjing Bao, Hongshuang Wang, Lixian Wen, Jian Wu, Yu-Cheng Gu, Xiaohui Wang, Yanchuan Zhao

Within pharmaceutical research, ensuring the enantiomeric purity of chiral compounds is critical. Specifically, chiral amines are a crucial category of compounds, due to their extensive therapeutic uses. However, the enantiomeric analysis of these compounds, particularly those with significant steric hindrance, remains a challenge. To address this issue, our research introduces a novel chiral 19F-tagged NNO palladium pincer probe, strategically engineered with an open binding site to accommodate bulky amines. This probe facilitates the enantiodifferentiation of such amines, as evidenced by the distinct 19F NMR signals generated by the enantiomers. Moreover, our findings highlight the probe's applicability in the chiral discrimination of various psychoactive substances, underscoring its potential for the identification of illegal stimulant use and contributing to forensic investigations.

在制药研究中,确保手性化合物的对映体纯度至关重要。具体来说,手性胺是一类重要的化合物,因为它们具有广泛的治疗用途。然而,这些化合物的对映体分析,尤其是那些具有明显立体阻碍的化合物的对映体分析,仍然是一项挑战。为解决这一问题,我们的研究引入了一种新型手性 19F 标记 NNO 钯钳探针,该探针经过战略设计,具有开放的结合位点,可容纳笨重的胺类化合物。对映体产生的不同 19F NMR 信号证明,该探针可促进此类胺的对映体分化。此外,我们的研究结果还突出了该探针在手性鉴别各种精神活性物质方面的适用性,强调了它在识别非法使用兴奋剂方面的潜力,并有助于法医调查。
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引用次数: 0
Deep Learning Enhanced Label-Free Action Potential Detection Using Plasmonic-Based Electrochemical Impedance Microscopy. 利用基于等离子体的电化学阻抗显微镜进行深度学习增强型无标记动作电位检测。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-02 DOI: 10.1021/acs.analchem.4c01179
Mohammad Javad Haji Najafi Chemerkouh, Xinyu Zhou, Yunze Yang, Shaopeng Wang

Measuring neuronal electrical activity, such as action potential propagation in cells, requires the sensitive detection of the weak electrical signal with high spatial and temporal resolution. None of the existing tools can fulfill this need. Recently, plasmonic-based electrochemical impedance microscopy (P-EIM) was demonstrated for the label-free mapping of the ignition and propagation of action potentials in neuron cells with subcellular resolution. However, limited by the signal-to-noise ratio in the high-speed P-EIM video, action potential mapping was achieved by averaging 90 cycles of signals. Such extensive averaging is not desired and may not always be feasible due to factors such as neuronal desensitization. In this study, we utilized advanced signal processing techniques to detect action potentials in P-EIM extracted signals with fewer averaged cycles. Matched filtering successfully detected action potential signals with as few as averaging five cycles of signals. Long short-term memory (LSTM) recurrent neural network achieved the best performance and was able to detect single-cycle stimulated action potential successfully [satisfactory area under the receiver operating characteristic curve (AUC) equal to 0.855]. Therefore, we show that deep learning-based signal processing can dramatically improve the usability of P-EIM mapping of neuronal electrical signals.

测量神经元的电活动(如细胞中的动作电位传播)需要高空间和时间分辨率的微弱电信号的灵敏检测。现有的工具都无法满足这一需求。最近,基于等离子体的电化学阻抗显微镜(P-EIM)被证明可以无标记地绘制亚细胞分辨率的神经元细胞内动作电位的点燃和传播图。然而,受限于高速 P-EIM 视频的信噪比,动作电位图是通过平均 90 个周期的信号来实现的。由于神经元脱敏等因素,我们并不希望进行如此广泛的平均,而且这种方法也不一定可行。在这项研究中,我们利用先进的信号处理技术,以较少的平均周期检测 P-EIM 提取信号中的动作电位。匹配滤波法成功地检测到了只需平均五个周期信号的动作电位信号。长短期记忆(LSTM)递归神经网络的性能最佳,能够成功检测到单周期刺激动作电位[接收者工作特征曲线下面积(AUC)等于 0.855,令人满意]。因此,我们证明了基于深度学习的信号处理可以显著提高神经元电信号 P-EIM 映射的可用性。
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引用次数: 0
Stabilizing and Accelerating Secondary Flow in Ultralong Spiral Channel for High-Throughput Cell Manipulation. 稳定和加速超长螺旋通道中的二次流动,实现高通量细胞操作。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-02 DOI: 10.1021/acs.analchem.4c01549
Shaofei Shen, Xufang Liu, Kuohai Fan, Hanjie Bai, Xiaoping Li, Hongquan Li

Efficient cell manipulation is essential for numerous applications in bioanalysis and medical diagnosis. However, the lack of stability and strength in the secondary flow, coupled with the narrow range of practical throughput, severely restricts the diverse applications. Herein, we present an innovative inertial microfluidic device that employs a spiral channel for high-throughput cell manipulation. Our investigation demonstrates that the regulation of Dean-like secondary flow in the microchannel can be achieved through geometric confinement. Introducing ordered microstructures into the ultralong spiral channel (>90 cm) stabilizes and accelerates the secondary flow among different loops. Consequently, effective manipulation of blood cells within a wide cell throughput range (1.73 × 108 to 1.16 × 109 cells/min) and cancer cells across a broad throughput range (0.5 × 106 to 5 × 107 cells/min) can be achieved. In comparison to previously reported technologies, our engineering approach of stabilizing and accelerating secondary flow offers specific performance for cell manipulation under a wide range of high-throughput manner. This engineered spiral channel would be promising in biomedical analysis, especially when cells need to be focused efficiently on large-volume liquid samples.

高效的细胞操作对于生物分析和医疗诊断的众多应用至关重要。然而,二次流动缺乏稳定性和强度,加上实际通量范围较窄,严重限制了其多样化应用。在此,我们提出了一种创新的惯性微流控装置,该装置采用螺旋通道进行高通量细胞操作。我们的研究表明,可以通过几何限制来调节微通道中类似迪恩的二次流动。在超长螺旋通道(大于 90 厘米)中引入有序微结构可稳定并加速不同环路间的二次流动。因此,可以在较宽的细胞吞吐量范围(1.73 × 108 到 1.16 × 109 个细胞/分钟)内有效处理血细胞,并在较宽的吞吐量范围(0.5 × 106 到 5 × 107 个细胞/分钟)内有效处理癌细胞。与之前报道的技术相比,我们稳定和加速二次流动的工程方法在广泛的高通量方式下为细胞操作提供了特殊性能。这种工程螺旋通道在生物医学分析中将大有可为,尤其是当细胞需要有效地集中在大容量液体样品上时。
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引用次数: 0
Electrochemiluminescence of Ultrasmall Silica Nanoparticles from Size Modulation and Multipath Surface State Adjustment for Ultrasensitive HIV-DNA Fragment Detection. 超小型二氧化硅纳米粒子的电化学发光,用于超灵敏 HIV-DNA 片段检测的尺寸调制和多径表面状态调整。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-02 DOI: 10.1021/acs.analchem.4c01106
Jiaxin Duan, Weiwei Cao, Xin Zhu, Qian Li, Ruo Yuan, Haijun Wang

Here, ultrasmall SiO2 nanoparticles (u-SiO2 NPs, <5 nm) with obvious electrochemiluminescence (ECL) phenomenon, which was absent for conventional silica nanoparticles (c-SiO2 NPs), were reported. In a finite ultrasmall volume, the u-SiO2 NPs exhibited increasing ground state energy and higher optical absorption strength due to the electron-hole confinement model and favored catalyzing the reaction through the rapid diffusion of bulk charge, resulting in apparent ECL emission. Then, Zn2+-induced u-SiO2 nanoaggregates (Zn/u-SiO2-Ov nAGG) were synthesized and exhibited improved ECL performance via multipath surface state adjustment of u-SiO2 from several aspects, including aggregation-induced ECL, the generation of oxygen vacancy (Ov), and more positive surface charge. In addition, an ECL biosensor was constructed for ultrasensitive human immunodeficiency virus-related deoxyribonucleic acid detection from 100 aM to 1 nM with a low limit of 50.48 aM, combining the ECL luminescence of Zn/u-SiO2-Ov nAGG with three-dimensional DNA nanomachine-mediated multioutput amplification for enhanced accuracy and sensitivity compared to the single-output method. Therefore, exploring the ECL of ultrasmall nanoparticles via the adjustment of size and surface state provided a valuable indication to a wider investigation and application of novel ECL materials for clinical diagnostic.

本文报告了超小二氧化硅纳米粒子(u-SiO2 NPs,2 NPs)。在有限的超小体积中,u-SiO2 NPs 由于电子-空穴禁闭模型而表现出越来越高的基态能量和更高的光吸收强度,并有利于通过体电荷的快速扩散催化反应,从而产生明显的 ECL 发射。然后,合成了 Zn2+ 诱导的 u-SiO2 纳米聚集体(Zn/u-SiO2-Ov nAGG),并通过对 u-SiO2 的多径表面态调整,从聚集诱导的 ECL、氧空位(Ov)的产生和更多的正表面电荷等几个方面改善了 ECL 性能。此外,结合 Zn/u-SiO2-Ov nAGG 的 ECL 发光和三维 DNA 纳米机械介导的多输出放大,构建了一种用于检测 100 aM 至 1 nM 的超灵敏人类免疫缺陷病毒相关脱氧核糖核酸的 ECL 生物传感器,其低限为 50.48 aM,与单输出方法相比,提高了准确性和灵敏度。因此,通过调节尺寸和表面状态来探索超小纳米颗粒的 ECL,为更广泛地研究和应用新型 ECL 材料进行临床诊断提供了宝贵的启示。
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引用次数: 0
Highly Specific Aptamer-Antibody Birecognized Sandwich Module for Ultrasensitive Detection of a Low Molecular Weight Compound. 用于超灵敏检测低分子量化合物的高特异性 Aptamer-Antibody Birecognized Sandwich 模块。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-02 DOI: 10.1021/acs.analchem.4c01268
Ying Zhou, Yuying Wei, Jia Zhang, Xiaoyu Shi, Liang Ma, Ruo Yuan

Herein, the aptamer-antibody sandwich module was first introduced to accurately recognize a low molecular weight compound (mycotoxin). Impressively, compared with the large steric hindrance of a traditional dual-antibody module, the aptamer-antibody sandwich with low Gibbs free energy and a low dissociation constant has high recognition efficiency; thus, it could reduce false positives and false negatives caused by a dual-antibody module. As a proof of concept, a sensitive electrochemiluminescence (ECL) biosensor was constructed for detecting mycotoxin zearalenone (ZEN) based on an aptamer-antibody sandwich as a biological recognition element and porous ZnO nanosheets (Zn NSs) supported Cu nanoclusters (Cu NCs) as the signal transduction element, in which the antibody was modified on the vertex of a tetrahedral DNA nanostructure (TDN) with a rigid structure to increase the kinetics of target recognition for promoting the detection sensitivity. Moreover, the Cu NCs/Zn NSs exhibited an excellent ECL response that was attributed to the aggregation-induced ECL enhancement through electrostatic interactions. The sensing platform achieved trace detection of ZEN with a low detection limit of 0.31 fg/mL, far beyond that of the enzyme-linked immunosorbent assay (ELISA, the current rapid detection method) and high-performance liquid chromatography (HPLC, the national standard detection method). The strategy has great application potential in food analysis, environmental monitoring, and clinical diagnosis.

在此,我们首次引入了能准确识别低分子量化合物(霉菌毒素)的ptamer-抗体夹心模块。令人印象深刻的是,与传统双抗体模块的巨大立体阻碍相比,具有低吉布斯自由能和低解离常数的适配体-抗体夹心模块具有很高的识别效率,因此可以减少双抗体模块造成的假阳性和假阴性。作为概念验证,研究人员构建了一种灵敏的电化学发光(ECL)生物传感器,用于检测霉菌毒素玉米赤霉烯酮(ZEN),该传感器以适配体-抗体夹心为生物识别元件,以多孔氧化锌纳米片(Zn NSs)支撑的铜纳米团簇(Cu NCs)为信号传导元件、其中,抗体被修饰在具有刚性结构的四面体 DNA 纳米结构(TDN)的顶点上,以增加目标识别的动力学特性,从而提高检测灵敏度。此外,Cu NCs/Zn NSs 还表现出极佳的 ECL 反应,这归因于通过静电相互作用聚集引起的 ECL 增强。该传感平台实现了对 ZEN 的痕量检测,检测限低至 0.31 fg/mL,远远超过了酶联免疫吸附法(ELISA,目前的快速检测方法)和高效液相色谱法(HPLC,国家标准检测方法)。该策略在食品分析、环境监测和临床诊断方面具有巨大的应用潜力。
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引用次数: 0
Highly Sensitive Spatial Glycomics at Near-Cellular Resolution by On-Slide Derivatization and Mass Spectrometry Imaging. 通过滑动衍生化和质谱成像技术实现近细胞分辨率的高灵敏度空间糖化学。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-02 DOI: 10.1021/acs.analchem.3c05984
Cécile Cumin, Lindsay Gee, Thomas Litfin, Ropafadzo Muchabaiwa, Gael Martin, Oren Cooper, Viola Heinzelmann-Schwarz, Tobias Lange, Mark von Itzstein, Francis Jacob, Arun Everest-Dass

Glycans on proteins and lipids play important roles in maturation and cellular interactions, contributing to a variety of biological processes. Aberrant glycosylation has been associated with various human diseases including cancer; however, elucidating the distribution and heterogeneity of glycans in complex tissue samples remains a major challenge. Matrix-assisted laser desorption/ionization (MALDI) mass spectrometry imaging (MSI) is routinely used to analyze the spatial distribution of a variety of molecules including N-glycans directly from tissue surfaces. Sialic acids are nine carbon acidic sugars that often exist as the terminal sugars of glycans and are inherently difficult to analyze using MALDI-MSI due to their instability prone to in- and postsource decay. Here, we report on a rapid and robust method for stabilizing sialic acid on N-glycans in FFPE tissue sections. The established method derivatizes and identifies the spatial distribution of α2,3- and α2,6-linked sialic acids through complete methylamidation using methylamine and PyAOP ((7-azabenzotriazol-1-yloxy)tripyrrolidinophosphonium hexafluorophosphate). Our in situ approach increases the glycans detected and enhances the coverage of sialylated species. Using this streamlined, sensitive, and robust workflow, we rapidly characterize and spatially localize N-glycans in human tumor tissue sections. Additionally, we demonstrate this method's applicability in imaging mammalian cell suspensions directly on slides, achieving cellular resolution with minimal sample processing and cell numbers. This workflow reveals the cellular locations of distinct N-glycan species, shedding light on the biological and clinical significance of these biomolecules in human diseases.

蛋白质和脂质上的聚糖在成熟和细胞相互作用中发挥着重要作用,对各种生物过程都有贡献。糖基化异常与包括癌症在内的多种人类疾病有关;然而,阐明复杂组织样本中聚糖的分布和异质性仍是一大挑战。基质辅助激光解吸/电离(MALDI)质谱成像(MSI)被常规用于分析各种分子的空间分布,包括直接从组织表面提取的N-聚糖。硅酸是九碳酸糖,通常作为聚糖的末端糖存在,由于其不稳定性容易发生源内和源后衰变,因此很难使用 MALDI-MSI 进行分析。在此,我们报告了一种快速、稳健的方法,用于稳定 FFPE 组织切片中 N-聚糖上的硅酸。通过使用甲胺和 PyAOP((7-azabenzotriazol-1-yloxy)tripyrrolidinophosphonium hexafluorophosphate)进行完全甲基化,该方法可衍生并识别α2,3-和α2,6-连接的硅酸的空间分布。我们的原位方法增加了检测到的聚糖数量,提高了糖基化物种的覆盖率。利用这种精简、灵敏、稳健的工作流程,我们可以快速鉴定和定位人体肿瘤组织切片中的 N-聚糖。此外,我们还证明了这种方法适用于直接在载玻片上对哺乳动物细胞悬浮液进行成像,以最少的样品处理和细胞数量达到细胞分辨率。这一工作流程揭示了不同 N-糖种类在细胞中的位置,揭示了这些生物大分子在人类疾病中的生物学和临床意义。
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引用次数: 0
Development of a DNAzyme-Driven Fluorescent Light-Up Aptasensor for Label-Free Detection of Multiple lncRNAs. 开发一种 DNA 酶驱动的荧光上光 Aptasensor,用于无标记检测多种 lncRNA。
IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-02 DOI: 10.1021/acs.analchem.4c02496
Dong-Ming Yang, Yun Han, Qian Zhang, Shulin Zhao, Chun-Yang Zhang

Long noncoding RNAs (lncRNAs) act as the dynamic regulatory molecules that control the expression of genes and affect numerous biological processes, and their dysregulation is associated with tumor progression. Herein, we develop a fluorescent light-up aptasensor to simultaneously measure multiple lncRNAs in living cells and breast tissue samples based on the DNAzyme-mediated cleavage reaction and transcription-driven synthesis of light-up aptamers. When target lncRNAs are present, they can be recognized by template probes to form the active DNAzyme structures, initiating the T4 PNK-catalyzed dephosphorylation-triggered extension reaction to generate double-strand DNAs with the T7 promoter sequences. The corresponding T7 promoters can initiate the transcription amplification catalyzed by the T7 RNA polymerase to generate abundant Broccoli aptamers and malachite green aptamers, which can bind DFHBI-1T and MG to generate strong fluorescence signals. Taking advantage of the good selectivity of DNAzyme-mediated cleavage of lncRNAs, high amplification efficiency of T7 transcription-driven amplification reaction, and bright fluorescence of the RNA aptamer-fluorophore complex, this method exhibits high sensitivity with a detection limit of 21.4 aM for lncRNA HOTAIR and 18.47 aM for lncRNA MALAT1, and it can accurately measure multiple lncRNAs in both tumor cell lines and breast tissue samples, providing a powerful paradigm for biomedical research and early clinic diagnostics.

长非编码RNA(lncRNA)是控制基因表达和影响多种生物过程的动态调控分子,它们的失调与肿瘤进展有关。在此,我们基于 DNA 酶介导的裂解反应和转录驱动的发光适配体合成,开发了一种荧光发光适配体传感器,可同时测量活细胞和乳腺组织样本中的多个 lncRNA。当目标 lncRNA 存在时,它们可以被模板探针识别,形成活性 DNA 酶结构,启动 T4 PNK 催化的去磷酸化触发延伸反应,生成带有 T7 启动子序列的双链 DNA。相应的 T7 启动子可启动 T7 RNA 聚合酶催化的转录扩增,生成丰富的西兰花拟合子和孔雀石绿拟合子,它们可与 DFHBI-1T 和 MG 结合,产生强烈的荧光信号。利用 DNA 酶介导的裂解对 lncRNA 的良好选择性、T7 转录驱动扩增反应的高扩增效率以及 RNA 合体-荧光团复合物的明亮荧光,该方法表现出很高的灵敏度,检测限为 21.该方法灵敏度高,lncRNA HOTAIR 的检测限为 21.4 aM,lncRNA MALAT1 的检测限为 18.47 aM,可准确检测肿瘤细胞系和乳腺组织样本中的多个 lncRNA,为生物医学研究和早期临床诊断提供了有力的范例。
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引用次数: 0
期刊
Analytical Chemistry
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