Fungal Ecology最新文献

Host identity and location help shape fungal endophyte assemblages in plants. Hosts act as uptake filters from the environment and closely related hosts in the same location may harbour similar assemblages. We assessed the influence of host identity and geographic location on endophytic fungal assemblages within the native African olive and cultivated European olive in South Africa using high throughput sequencing. As hypothesised, the two hosts were found to share many endophytic species, but alpha diversity was lower within the European olive. The two hosts had significantly dissimilar endophyte assemblages. Distance between sites positively correlated with endophyte assemblage dissimilarities, demonstrating a strong effect of the surrounding environment on endophyte assemblages. African olive individuals had highly connected endophyte assemblages, unlike those within the European olive. Microbiome sharing and disconnected assemblages may have negative impacts on the health of the cultivated host.

Sarcosoma globosum is a spring-fruiting ascomycete associated with boreal spruce forests characterized by long forest continuity. It is assessed as Near Threatened (NT) according to the global evaluation of International Union for Conservation of Nature (IUCN). We report data of S. globosum in Finland for 1915–2021, before and after availability of digital observation tools (<2015 vs. 2015>). Here, we report in total 586 observations of S. globosum in Finland. We report a huge increase of S. globosum observations since 2015 (+786% average annual increase in observations compared to years 1990–2014). Specimens deposited in public herbaria and data from the environmental authorities have declined. Our results indicate emergence of a new, citizen-based observation culture of fungi. Changes in observation activity may disguise true changes in fungal populations.

Phyllosphere fungi form close ecological ties with their hosts and participate in multiple ecosystem processes. This research investigated simulated climate change effects of warming and precipitation manipulationon the Aster tataricus fungal community in a Qinghai-Tibetan Plateau alpine meadow. Increased precipitation increased the fungal community diversity and richness indices, but warming had the opposite effect. Warming and precipitation adjustment in combination reduced the fungal community diversity. FUNGuild functional analysis of differences in the leaf fungal community in our study, and linked statistical analysis, determined that increasing precipitation significantly reduced relative abundance of pathogenic fungi and incidence of plant diseases, while warming and decreased precipitation did the opposite. Differences in the leaf fungal community in our study under warming and decreased precipitation would be predicted to increase incidence of plant diseases. These climate change simulations improve awareness of future plant disease risks in natural plant communities and provide opportunities to develop responses.

The functional diversity of fungi remains poorly explored in the deep-sea, particularly in hydrothermal vents. Here, we approached this gap through the analysis of stable isotopes of carbon (δ¹³C), nitrogen (δ¹⁵N), and sulfur (δ³⁴S) of fourteen isolates obtained from three deep-sea vent systems of the southern Gulf of California. The δ¹³C results indicated that 60% of the isolates relied on mixed carbon sources fixed by the Calvin-Benson-Bassham and the reductive Tricarboxylic Acid (rTCA) cycles, whereas 40% relied exclusively on rTCA carbon. The δ¹⁵N and δ³⁴S values suggested a dependence on local and external nitrogen sources and the assimilation of chemosynthetic and photosynthetic inputs. Fungal δ¹³C and δ¹⁵N overlapped with those of primary and secondary vent macroconsumers, implying the assimilation of bacterial and invertebrate necromass and their ecological role as parasites. These findings provide insights into the unexplored trophic versatility of fungi in chemosynthetic ecosystems, highlighting their importance in deep-sea trophic dynamics.

Patterns and drivers of succession provide insight into the mechanisms that govern community assembly, but remain poorly understood for microbial communities. We assess whether successional trends of trees are mirrored by foliar endophyte communities of three tree species across a deterministic woody successional gradient. Additionally, we test the relative contribution of abiotic predictors, biotic factors, and spatial distance between sites in predicting composition and richness of endophyte communities. Unlike the tree community, endophyte communities showed no consistent evidence of deterministic succession. Host identity was the most important factor structuring endophyte community composition; within hosts, spatial distance from the indigenous forest and between samples was important, while environmental predictors had small and inconsistent effects. Much variation in endophyte composition remained unexplained. In contrast, endophyte richness was well-explained by predictor variables. Host identity was most important in predicting endophyte richness, while the effect of other predictors on richness differed between host species. We conclude that deterministic succession in trees did not result in deterministic succession in endophyte communities; instead community assembly was most strongly influenced by host identity; while within hosts, neutral processes may be more important for endophyte assembly than deterministic factors.

Recent studies have shown that mycorrhizal trees can greatly influence soil microbial communities, which in turn play important roles in the function offorest ecosystems. However, there is lack of understanding how the composition of trees with different mycorrhizal types affects soil microbial communities. Here, we collected 1606 soil samples from a 25-ha subtropical forest plot to investigate how the proportion of arbuscular mycorrhizal (AM) versus ectomycorrhizal (EcM) trees mediated soil microbial assemblages. Results showed the alpha diversities of both soil fungal and bacterial communities were significantly positively correlated with the ratio of AM/EcM trees. The AM/EcM tree ratio was important to the fungal community assembly, whereas soil pH was key to the bacterial communities. The increase in the AM/EcM tree ratio decreased the importance of stochastic forces in assembling fungal communities, while it had no significant effect on the bacterial communities. The differential importance of the AM/EcM tree ratio to fungal and bacterial communities highlights the role of mycorrhiza-associated tree composition in regulating soil microbial communities. This finding suggests that forests with different AM/EcM tree ratios would have different soil microbial communities, potentially leading to differences in soil nutrient cycling and in return different tree diversity and forest productivity.

In maize-soybean intercropping systems, the transfer of N from soybean to maize gives the intercropping system the advantage of improved N utilization and higher yields. Mycorrhiza acts as an important pathway for N transfer, providing a constant supply of N to sustain the growth and development of maize in its early stages. However, it is not clear how arbuscular mycorrhizal fungi (AMF) drive the transfer of N from soybean to maize in the intercropping system. Therefore, we quantified the amount of N transferred from soybean to maize under low and high N levels in the intercropping system, and the abundance and diversity of AMF involved in N transfer (¹⁵N-AMF) under different conditions by ¹⁵N leaf marker and DNA-SIP technology. We found that the interaction between roots and reducing the application of N fertilizer increased the amount of N transfer from soybean to maize. Compared with plastic plate separation (PS), no separation (NS) and mesh separation (MS) significantly increased the N fixation rate (from 14.33% to 39.09%), and the amount of N transfer under NS was 1.95–3.48 times that under MS. N transfer from soybean to maize ranged from 9.7 to 43.42 mg per pot in the no N treatment, while the addition of N fertilizer reduced N transfer by 14.12–66.28%. This is due to root interaction and reduced N fertilization increased the abundance and diversity of the ¹⁵N-AMF community, thereby promoting AMF colonization of maize and soybean roots. AMF colonization in soybean and maize roots under NS treatment was 6.47–17.24% higher than under MS treatment in all three levels of N addition. The increase of mycorrhiza in root system increased the N transfer from soybean to maize significantly. These results suggest that reduced N fertilizer in maize-soybean intercropping systems can increase N transfer by the mycorrhizal pathway, meeting maize N requirements and reducing chemical N fertilizer, which is important for sustainable agricultural development.

The temperate forests of Australia support a high diversity of hypogeous fungi and a wide variety of mycophagous mammals, yet many mammal-fungal relationships are still poorly understood. We studied the seasonal fungal diets of eight sympatric mammals (seven marsupials and one rodent) in a remnant montane eucalypt forest. Fifty-five different fungal taxa were identified from 305 scat samples. Swamp wallabies (Wallabia bicolor), yellow-footed antechinus (Antechinus flavipes) and brown antechinus (A. stuartii) were the primary mycophagists in this community, but all mammals consumed fungi, including three species not previously recorded as mycophagous (eastern grey kangaroo, Macropus giganteus;common wallaroo, Osphranter robustus; and common dunnart, Sminthopsis murina). Winter was the peak season for fungal consumption and dietary diversity of fungi, however, the diversity of taxa ingested varied between species and season. Our work supports the idea that a diverse mycophagous mammal community is important for maintaining natural variation in fungal community composition.

Fungi in the phylum Cryptomycota have been recovered in numerous environmental DNA (eDNA) surveys but are only known from five described genera of intracellular parasites. These fungi are common in aquatic and soil habitats, but little is known about their relative diversity and specificity among particular habitats. We surveyed Cryptomycota from 80 eDNA samples including freshwater, soil, and marine habitats using Cryptomycota-preferential primers coupled with long-amplicon PacBio sequencing (1.2 kb of the 18S rRNA gene region). We found that freshwater samples were the most diverse, comprising 175 operational taxonomic units (OTUs) of Cryptomycota and also showed a high abundance of the related algae-parasitic group Aphelidiomycota, while marine samples were the least diverse with 25 OTUs. The composition of Cryptomycota communities was influenced by habitat, with freshwater and soil showing statistically distinct communities. Phylogenetic analyses showed that the present survey recovered most previously sampled major clades of Cryptomycota, but most (61%) OTUs were novel to this study, indicative of an extensive diversity of the group that remains largely uncharacterized.

The grapevine trunk diseases Eutypa and Botryosphaeria dieback, caused by fungal species that infect pruning wounds, are a threat to vineyard longevity worldwide. This study evaluated the susceptibility of grapevine pruning wounds in three climatic regions of Australia. In field trials, wounds were made early, mid- and late winter, and inoculated with spores of Eutypa lata or Diplodia seriata at various times, from 1 to 112 days after pruning. For both pathogens, wounds were highly susceptible immediately after pruning, followed by a rapid decrease in susceptibility over the next 14 days in McLaren Vale and Adelaide Hills, South Australia, whereas the period of susceptibility was longer in Big Rivers, New South Wales, where high natural disease pressure of D. seriata confounded results. In the Adelaide Hills, delaying pruning to late winter may reduce the risk of infection by E. lata. A detached cane assay confirmed that the duration of susceptibility of six commonly grown cultivars to E. lata infection was similar.