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Integrating genomic mutations and tumor-infiltrating lymphocytes improves prediction of response to trastuzumab-based adjuvant therapy in patients with HER2-positive breast cancer. 整合基因组突变和肿瘤浸润淋巴细胞可提高her2阳性乳腺癌患者对曲妥珠单抗辅助治疗反应的预测。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-09-08 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.133
Shuangshuang Lu, Yuliang Zhang, Yiwei Tong, Lan Shu, Renhong Huang, Yijin Gu, Chaofu Wang, Jianfeng Li, Kunwei Shen, Lei Dong, Xiaosong Chen

Aim: Resistance to trastuzumab remains a major barrier to cure in early-stage HER2-positive breast cancer (HER2+ BC). We investigated the impact of genomic alterations and tumor-infiltrating lymphocyte (TIL) density on treatment resistance and survival outcomes. Methods: We retrospectively analyzed 315 patients with HER2+ BC who received adjuvant trastuzumab at Ruijin Hospital (2009-2019). Whole-exome sequencing and TIL scoring were performed on surgical specimens, and clinical and pathological data were collected. The Cancer Genome Atlas (TCGA) cohort was used for external validation. Genomic alterations and TIL density were compared between trastuzumab-sensitive and -resistant tumors. Survival analyses were conducted to identify prognostic biomarkers. Results: After a median follow-up of 109.3 months, 67 tumors (21.3%) were trastuzumab-resistant, exhibiting lower TIL density (mean 19.8% vs. 26.3%, P = 0.001), higher mutation frequencies in FLG, MAP1A, BRCA1, PTPRD, PAPPA2, NCOR2, FBXW7, MYH7, and VCAN, and more frequent alterations in the TP53/NOTCH pathways compared with sensitive tumors (all P < 0.05). A 15-gene trastuzumab response-associated gene (TRAG) signature independently predicted poorer disease-free survival (DFS) in both our cohort (HR, 3.57, P < 0.001) and the TCGA cohort (HR, 4.99, P = 0.037). A high copy number alteration burden was associated with worse overall survival (HR, 2.49, P = 0.043), whereas TIL density > 10% was associated with improved DFS (HR, 2.44, P = 0.003). A prognostic model integrating tumor size, nodal status, estrogen receptor status, TILs, and the TRAG signature showed strong discriminatory power (c-index 0.743 in the training set; 0.915 in the validation set). Conclusion: Genomic alterations and reduced TIL density underpin trastuzumab resistance. The novel TRAG signature and integrated prognostic model enhance risk stratification and may guide personalized adjuvant therapy in early-stage HER2+ BC.

目的:曲妥珠单抗耐药仍然是早期HER2阳性乳腺癌(HER2+ BC)治愈的主要障碍。我们研究了基因组改变和肿瘤浸润淋巴细胞(TIL)密度对治疗耐药性和生存结果的影响。方法:回顾性分析2009-2019年瑞金医院接受辅助曲妥珠单抗治疗的315例HER2+ BC患者。对手术标本进行全外显子组测序和TIL评分,并收集临床和病理资料。使用癌症基因组图谱(TCGA)队列进行外部验证。比较曲妥珠单抗敏感和耐药肿瘤的基因组改变和TIL密度。进行生存分析以确定预后生物标志物。结果:中位随访109.3个月后,67例肿瘤(21.3%)出现曲曲单抗耐药,TIL密度较低(平均19.8% vs. 26.3%, P = 0.001), FLG、MAP1A、BRCA1、PTPRD、PAPPA2、NCOR2、FBXW7、MYH7和VCAN的突变频率较高,TP53/NOTCH通路的改变比敏感肿瘤更频繁(均P < 0.05)。在我们的队列(HR, 3.57, P < 0.001)和TCGA队列(HR, 4.99, P = 0.037)中,15个基因的曲妥珠单抗反应相关基因(TRAG)特征独立预测较差的无病生存(DFS)。高拷贝数改变负担与较差的总生存期相关(HR, 2.49, P = 0.043),而TIL密度bbb10 %与改善的DFS相关(HR, 2.44, P = 0.003)。结合肿瘤大小、淋巴结状态、雌激素受体状态、TILs和TRAG特征的预后模型具有很强的判别能力(c-index在训练集为0.743,在验证集为0.915)。结论:基因组改变和TIL密度降低是曲妥珠单抗耐药的基础。新的TRAG特征和综合预后模型增强了风险分层,并可能指导早期HER2+ BC的个性化辅助治疗。
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引用次数: 0
Targeting the hypoxia signaling pathway with nanomedicine to reverse immunotherapy resistance. 纳米药物靶向缺氧信号通路逆转免疫治疗耐药。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-09-02 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.132
Xiaoliang Cheng, Peixing Wang, Hongqiang Lyu, Yonghyun Lee, Juyoung Yoon, Haiyan Dong

Immunotherapy has emerged as a major therapeutic strategy for cancer; however, immunotherapy resistance remains a significant challenge. Hypoxia, a key hallmark of the tumor microenvironment resulting from the imbalance between the high oxygen demand of rapidly proliferating cancer cells and the limited supply from abnormal blood vessels, plays a central role in driving immunotherapy resistance. Hypoxia-inducible factor-1α (HIF-1α) and its downstream signaling pathways contribute to this resistance by promoting macrophage polarization toward the protumorigenic M2 phenotype, inducing T cell exhaustion, facilitating immune evasion, enhancing angiogenesis, and activating other resistance mechanisms. The review highlights the mechanisms by which hypoxia regulates resistance to immunotherapy and provides a comprehensive overview of nanotechnology-based strategies designed to counteract hypoxia-induced resistance. Finally, the prospects and challenges of translating nanomedicine-based drug delivery systems into clinical practice for overcoming immunotherapy resistance are outlined.

免疫疗法已成为癌症的主要治疗策略;然而,免疫治疗耐药性仍然是一个重大挑战。缺氧是肿瘤微环境的一个关键标志,它是由快速增殖的癌细胞的高氧需求与异常血管的有限供应之间的不平衡造成的,在驱动免疫治疗抵抗中起着核心作用。缺氧诱导因子-1α (HIF-1α)及其下游信号通路通过促进巨噬细胞向致瘤性M2表型极化、诱导T细胞衰竭、促进免疫逃避、增强血管生成和激活其他抵抗机制参与这种抵抗。这篇综述强调了缺氧调节免疫治疗抵抗的机制,并提供了基于纳米技术的策略的全面概述,旨在对抗缺氧诱导的抵抗。最后,概述了将基于纳米药物的药物输送系统转化为克服免疫治疗耐药性的临床实践的前景和挑战。
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引用次数: 0
Cryptotanshinone differentially induces cell death in ATP6V0D1-deficient pancreatic cancer cells. 隐丹参酮诱导atp6v0d1缺陷胰腺癌细胞死亡的差异
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-08-27 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.103
Fangquan Chen, Junhao Lin, Xiutao Cai, Hu Tang, Shengfeng Li, Ruirui Liang, Rui Kang, Zhenhui Zhang, Daolin Tang, Jiao Liu

Aim: Dysregulation of tumor-suppressive pathways can lead to constitutive activation of multiple oncogenic signaling cascades. Such overactivation makes cancer cells highly dependent on these pathways, creating potential therapeutic vulnerabilities. Based on our previous findings and current data, genetic knockout of ATPase H+ transporting V0 subunit D1 (ATP6V0D1) - a key mediator of alkaliptosis - induces hyperactivation of oncogenic pathways, including signal transducer and activator of transcription 3 (STAT3)-mediated lysosomal pH regulation and AKT serine/threonine kinase (AKT) signaling. It also alters cellular responses to cryptotanshinone therapy. This study aimed to investigate how ATP6V0D1 deficiency reshapes oncogenic signaling networks and cellular heterogeneity in pancreatic ductal adenocarcinoma (PDAC), while evaluating therapeutic strategies that exploit alkaliptosis-related vulnerabilities. Methods: ATP6V0D1-deficient SW1990 and MIAPaCa2 cells were generated via gene knockdown. Cell viability and death following various treatments were assessed using CCK-8 and propidium iodide assays. Transcriptomic analysis was conducted to identify feedback signaling pathways, while Western blotting was used to measure expression of signaling proteins. Macropinocytosis was evaluated by TRITC-dextran uptake. Additionally, The Cancer Dependency Map (DepMap) database was analyzed to explore background differences between SW1990 and MIAPaCa2 cells. Results: ATP6V0D1 deletion led to overactivation of STAT3-mediated lysosomal pH regulation and AKT signaling; inhibition of these pathways restored alkaliptosis. Notably, cryptotanshinone selectively induced cell death in ATP6V0D1-deficient MIAPaCa2 cells but not SW1990 cells. Resistance in SW1990 cells was mediated by FGFR2 upregulation, which was reversed upon FGFR2 inhibition. Conclusion: ATP6V0D1 deficiency drives PDAC progression via dual mechanisms: compensatory oncogenic signaling (STAT3/AKT) and FGFR2-mediated cellular heterogeneity. While targeting these pathways may offer therapeutic potential, tumor heterogeneity remains a major clinical challenge.

目的:肿瘤抑制通路的失调可导致多种致癌信号级联的组成性激活。这种过度激活使癌细胞高度依赖这些途径,从而产生潜在的治疗脆弱性。基于我们之前的研究结果和目前的数据,基因敲除运输V0亚基D1 (ATP6V0D1)的ATPase H+ -碱沉的关键介质-诱导致癌途径的过度激活,包括信号转导和转录激活因子3 (STAT3)介导的溶酶体pH调节和AKT丝氨酸/苏氨酸激酶(AKT)信号传导。它还会改变细胞对隐丹参酮治疗的反应。本研究旨在研究ATP6V0D1缺陷如何重塑胰腺导管腺癌(PDAC)的致癌信号网络和细胞异质性,同时评估利用碱中毒相关脆弱性的治疗策略。方法:通过敲低atp6v0d1缺陷细胞SW1990和MIAPaCa2。采用CCK-8和碘化丙啶测定不同处理后的细胞活力和死亡情况。转录组学分析鉴定反馈信号通路,Western blotting检测信号蛋白表达。用tritc -葡聚糖摄取法评价巨量红细胞增生。此外,我们还分析了癌症依赖图谱(DepMap)数据库,以探索SW1990和MIAPaCa2细胞之间的背景差异。结果:ATP6V0D1缺失导致stat3介导的溶酶体pH调节和AKT信号过度激活;抑制这些途径可以恢复碱中毒。值得注意的是,隐丹参酮选择性地诱导atp6v0d1缺陷的MIAPaCa2细胞死亡,而不是SW1990细胞。SW1990细胞的耐药是由FGFR2上调介导的,而FGFR2抑制后,这种上调被逆转。结论:ATP6V0D1缺陷通过双重机制驱动PDAC进展:代偿性致癌信号(STAT3/AKT)和fgfr2介导的细胞异质性。虽然靶向这些途径可能提供治疗潜力,但肿瘤异质性仍然是一个主要的临床挑战。
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引用次数: 0
Resistance signatures manifested in early drug response across cancer types and species. 耐药特征表现在癌症类型和物种的早期药物反应中。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-08-26 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.112
Cole Ruoff, Allison Mitchell, Priya Mondal, Vishaka Gopalan, Arashdeep Singh, Michael Gottesman, Sridhar Hannenhalli

Aim: Growing evidence points to non-genetic mechanisms underlying long-term resistance to cancer therapies. These mechanisms involve pre-existing or therapy-induced transcriptional cell states that confer resistance. However, the relationship between early transcriptional responses to treatment and the eventual emergence of resistant states remains poorly understood. Furthermore, it is unclear whether such early resistance-associated transcriptional responses are evolutionarily conserved. In this study, we examine the similarity between early transcriptional responses and long-term resistant states, assess their clinical relevance, and explore their evolutionary conservation across species. Methods: We integrated datasets on early drug responses and long-term resistance from multiple cancer cell lines, bacteria, and yeast to identify early transcriptional changes predictive of long-term resistance and assess their evolutionary conservation. Using genome-wide CRISPR-Cas9 knockout screens, we evaluated the impact of genes associated with resistant transcriptional states on drug sensitivity. Clinical datasets were analyzed to explore the prognostic value of the identified resistance-associated gene signatures. Results: We found that transcriptional states observed in drug-naive cells and shortly after treatment overlapped with those seen in fully resistant populations. Some of these shared features appear to be evolutionarily conserved. Knockout of genes marking resistant states sensitized ovarian cancer cells to Prexasertib. Moreover, early resistance gene signatures effectively distinguished therapy responders from non-responders in multiple clinical cancer trials and differentiated premalignant breast lesions that progressed to malignancy from those that remained benign. Conclusion: Early cellular transcriptional responses to therapy exhibit key similarities to fully resistant states across different drugs, cancer types, and species. Gene signatures defining these early resistance states have prognostic value in clinical settings.

目的:越来越多的证据指向癌症治疗长期耐药的非遗传机制。这些机制涉及预先存在的或治疗诱导的转录细胞状态,这些转录细胞状态赋予耐药性。然而,早期对治疗的转录反应与最终出现耐药状态之间的关系仍然知之甚少。此外,尚不清楚这种早期抗性相关的转录反应是否具有进化保守性。在这项研究中,我们研究了早期转录反应和长期耐药状态之间的相似性,评估了它们的临床相关性,并探索了它们在物种间的进化保守性。方法:我们整合了来自多种癌细胞系、细菌和酵母的早期药物反应和长期耐药数据集,以确定预测长期耐药的早期转录变化,并评估其进化保守性。使用全基因组CRISPR-Cas9敲除筛选,我们评估了与耐药转录状态相关的基因对药物敏感性的影响。对临床数据集进行分析,以探讨已确定的耐药相关基因特征的预后价值。结果:我们发现在药物初始细胞和治疗后不久观察到的转录状态与在完全耐药人群中观察到的转录状态重叠。其中一些共同特征似乎是进化上保守的。敲除标记耐药状态的基因使卵巢癌细胞对Prexasertib敏感。此外,在多个临床癌症试验中,早期耐药基因特征有效地区分了治疗应答者和无应答者,并区分了进展为恶性的乳腺癌前病变和良性病变。结论:不同药物、癌症类型和物种对治疗的早期细胞转录反应表现出完全耐药状态的关键相似性。定义这些早期耐药状态的基因特征在临床环境中具有预后价值。
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引用次数: 0
New advances in understanding the mechanisms and treatment challenges of ALK-targeted therapy resistance in lung cancer. 肺癌alk靶向治疗耐药机制和治疗挑战的新进展。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-08-25 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.122
Mengle Long, Shixuan Peng, Qingyang Wen, Zhijian Yin, Xinwen Zhang, Haoyu Tan, Yun Xu, Yongjun Wu

Despite the development of various effective anaplastic lymphoma kinase tyrosine kinase inhibitors (ALK-TKIs), therapeutic resistance remains a major challenge. Both on-target and off-target mechanisms have been identified as key contributors to resistance. With the popularization of genetic testing and the development of precision therapies, the prognosis and survival of patients with ALK-positive non-small cell lung cancer (NSCLC) have improved. However, even with second- and third-generation ALK-TKIs, overcoming resistance remains difficult. Resistance frequently arises during approved treatments, underscoring the need for further research to elucidate the molecular events and resistance mechanisms associated with ALK-positive lung cancer. The discovery of anaplastic lymphoma kinase (ALK) rearrangement as an actionable oncogenic driver in NSCLC has established a biomarker-driven treatment paradigm for advanced disease. This article summarizes current knowledge of the mechanisms of resistance to ALK-targeted therapy in lung cancer, including both primary and acquired mechanisms, treatment strategies following resistance, recent therapeutic advances, and the impact of the immune system and tumor microenvironment. A deeper understanding of ALK-targeted therapy resistance is critical for developing new treatment strategies and may provide important insights to guide the diagnosis, treatment, and management of patients with resistant ALK+ lung cancer.

尽管开发了各种有效的间变性淋巴瘤激酶酪氨酸激酶抑制剂(ALK-TKIs),但治疗耐药性仍然是一个主要挑战。靶内和脱靶机制都被确定为耐药性的关键因素。随着基因检测的普及和精准治疗的发展,alk阳性非小细胞肺癌(NSCLC)患者的预后和生存得到改善。然而,即使是第二代和第三代alk - tki,克服阻力仍然很困难。在批准的治疗中经常出现耐药性,这强调了进一步研究阐明与alk阳性肺癌相关的分子事件和耐药机制的必要性。间变性淋巴瘤激酶(ALK)重排作为NSCLC可操作的致癌驱动因素的发现,为晚期疾病建立了生物标志物驱动的治疗范式。本文综述了目前对肺癌alk靶向治疗耐药机制的了解,包括原发性和获得性机制、耐药后的治疗策略、最近的治疗进展以及免疫系统和肿瘤微环境的影响。深入了解ALK靶向治疗耐药对于制定新的治疗策略至关重要,并可能为指导耐药ALK+肺癌患者的诊断、治疗和管理提供重要见解。
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引用次数: 0
ROS1 mutations promote an immunosuppressive tumor microenvironment via MYC to confer immune evasion in head and neck cancer. ROS1突变通过MYC促进免疫抑制肿瘤微环境,从而导致头颈癌的免疫逃避。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-08-22 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.124
Chao Fang, Qin Zhang, Rui Fang, Ying Li, Jing Bai, Xiaojing Huang, Jingting Lu, Dongsheng Chen, Yanxiang Zhang, Zuhong Chen

Aim: Immune checkpoint inhibitors (ICIs) have transformed cancer therapy; however, their efficacy in head and neck cancer (HNC) remains limited, with only a minority of patients achieving durable responses. Understanding the molecular mechanisms underlying ICI resistance in HNC is therefore crucial. Methods: We conducted an integrative analysis of genomic, transcriptomic, and clinical data from 139 ICI-treated HNC patients (MSKCC cohort) and 502 treatment-naïve HNC cases (TCGA cohort). ROS1 mutation status, tumor mutational burden (TMB), neoantigen load, immune cell infiltration (via CIBERSORT), and immune-related gene expression were evaluated. Gene set enrichment analysis (GSEA) was performed to identify dysregulated pathways. Survival outcomes were assessed using Kaplan-Meier analysis and Cox regression, with statistical significance defined as P < 0.05. Results: Patients harboring ROS1 mutations exhibited significantly poorer outcomes following ICI therapy, with shorter median overall survival [OS: 5.0 vs. 11.0 months, hazard ratio (HR) = 3.22, 95%CI: 1.26-8.19, P = 0.011] compared to ROS1 wild-type counterparts. Multivariate analysis confirmed ROS1 mutation as an independent predictor of poor OS in ICI-treated patients (HR = 4.78, 95%CI: 1.70-13.43, P = 0.003). In contrast, ROS1 mutations showed no prognostic significance in the treatment-naïve TCGA-HNC cohort (P = 0.26), confirming their role as a predictive (not prognostic) biomarker for ICI response. Interestingly, despite exhibiting higher TMB and neoantigen levels, ROS1-mutant patients showed inferior survival, underscoring the context-dependent limitations of TMB as a predictive biomarker. Mechanistically, ROS1-mutant tumors displayed an immunosuppressive tumor microenvironment characterized by diminished CD8+ T cell infiltration, attenuated interferon-γ signaling, and downregulation of immune-related genes (CXCL9, CXCL10, IFNG, PD-L1). GSEA revealed enrichment of MYC pathway activity in ROS1-mutant tumors, which suppressed antigen presentation and T cell activation pathways. Conclusion: ROS1 mutations drive ICI resistance in HNC by promoting an immunosuppressive TME via MYC-mediated transcriptional reprogramming, impairing antigen presentation and T cell function. Incorporating ROS1 status into biomarker panels may improve patient stratification and guide combinatorial therapies targeting both immune evasion and oncogenic pathways.

目的:免疫检查点抑制剂(ICIs)已经改变了癌症治疗;然而,它们对头颈癌(HNC)的疗效仍然有限,只有少数患者实现了持久的反应。因此,了解HNC中ICI耐药性的分子机制至关重要。方法:我们对139例接受ci治疗的HNC患者(MSKCC队列)和502例treatment-naïve HNC患者(TCGA队列)的基因组、转录组学和临床数据进行了综合分析。评估ROS1突变状态、肿瘤突变负荷(TMB)、新抗原负荷、免疫细胞浸润(通过CIBERSORT)和免疫相关基因表达。基因集富集分析(GSEA)用于鉴定失调通路。生存结局采用Kaplan-Meier分析和Cox回归评估,P < 0.05为差异有统计学意义。结果:携带ROS1突变的患者在ICI治疗后表现出明显较差的结果,与ROS1野生型患者相比,中位总生存期更短[OS: 5.0 vs. 11.0个月,风险比(HR) = 3.22, 95%CI: 1.26-8.19, P = 0.011]。多因素分析证实ROS1突变是ci治疗患者生存不良的独立预测因子(HR = 4.78, 95%CI: 1.70 ~ 13.43, P = 0.003)。相比之下,ROS1突变在treatment-naïve TCGA-HNC队列中没有预后意义(P = 0.26),证实了它们作为ICI反应的预测性(非预后)生物标志物的作用。有趣的是,尽管表现出较高的TMB和新抗原水平,ros1突变患者的生存率较低,强调了TMB作为预测性生物标志物的环境依赖性局限性。在机制上,ros1突变肿瘤表现出免疫抑制的肿瘤微环境,其特征是CD8+ T细胞浸润减少,干扰素γ信号减弱,免疫相关基因(CXCL9, CXCL10, IFNG, PD-L1)下调。GSEA显示,在ros1突变肿瘤中MYC通路活性富集,抑制抗原呈递和T细胞活化途径。结论:ROS1突变通过myc介导的转录重编程促进免疫抑制TME,损害抗原呈递和T细胞功能,从而驱动HNC的ICI耐药。将ROS1状态纳入生物标志物面板可以改善患者分层,并指导针对免疫逃避和致癌途径的联合治疗。
{"title":"<i>ROS1</i> mutations promote an immunosuppressive tumor microenvironment via <i>MYC</i> to confer immune evasion in head and neck cancer.","authors":"Chao Fang, Qin Zhang, Rui Fang, Ying Li, Jing Bai, Xiaojing Huang, Jingting Lu, Dongsheng Chen, Yanxiang Zhang, Zuhong Chen","doi":"10.20517/cdr.2025.124","DOIUrl":"10.20517/cdr.2025.124","url":null,"abstract":"<p><p><b>Aim:</b> Immune checkpoint inhibitors (ICIs) have transformed cancer therapy; however, their efficacy in head and neck cancer (HNC) remains limited, with only a minority of patients achieving durable responses. Understanding the molecular mechanisms underlying ICI resistance in HNC is therefore crucial. <b>Methods:</b> We conducted an integrative analysis of genomic, transcriptomic, and clinical data from 139 ICI-treated HNC patients (MSKCC cohort) and 502 treatment-naïve HNC cases (TCGA cohort). <i>ROS1</i> mutation status, tumor mutational burden (TMB), neoantigen load, immune cell infiltration (via CIBERSORT), and immune-related gene expression were evaluated. Gene set enrichment analysis (GSEA) was performed to identify dysregulated pathways. Survival outcomes were assessed using Kaplan-Meier analysis and Cox regression, with statistical significance defined as <i>P</i> < 0.05. <b>Results:</b> Patients harboring <i>ROS1</i> mutations exhibited significantly poorer outcomes following ICI therapy, with shorter median overall survival [OS: 5.0 <i>vs.</i> 11.0 months, hazard ratio (HR) = 3.22, 95%CI: 1.26-8.19, <i>P</i> = 0.011] compared to <i>ROS1</i> wild-type counterparts. Multivariate analysis confirmed <i>ROS1</i> mutation as an independent predictor of poor OS in ICI-treated patients (HR = 4.78, 95%CI: 1.70-13.43, <i>P</i> = 0.003). In contrast, <i>ROS1</i> mutations showed no prognostic significance in the treatment-naïve TCGA-HNC cohort (<i>P</i> = 0.26), confirming their role as a predictive (not prognostic) biomarker for ICI response. Interestingly, despite exhibiting higher TMB and neoantigen levels, <i>ROS1</i>-mutant patients showed inferior survival, underscoring the context-dependent limitations of TMB as a predictive biomarker. Mechanistically, <i>ROS1</i>-mutant tumors displayed an immunosuppressive tumor microenvironment characterized by diminished CD8<sup>+</sup> T cell infiltration, attenuated interferon-γ signaling, and downregulation of immune-related genes (<i>CXCL9</i>, <i>CXCL10</i>, <i>IFNG</i>, <i>PD-L1</i>). GSEA revealed enrichment of <i>MYC</i> pathway activity in <i>ROS1</i>-mutant tumors, which suppressed antigen presentation and T cell activation pathways. <b>Conclusion:</b> <i>ROS1</i> mutations drive ICI resistance in HNC by promoting an immunosuppressive TME via <i>MYC</i>-mediated transcriptional reprogramming, impairing antigen presentation and T cell function. Incorporating <i>ROS1</i> status into biomarker panels may improve patient stratification and guide combinatorial therapies targeting both immune evasion and oncogenic pathways.</p>","PeriodicalId":70759,"journal":{"name":"癌症耐药(英文)","volume":"8 ","pages":"42"},"PeriodicalIF":4.6,"publicationDate":"2025-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12378350/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144980416","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
IRE1α modulates M1 oncolytic virus sensitivity via ER stress regulation in bladder cancer. IRE1α通过内质网应激调节膀胱癌中M1溶瘤病毒的敏感性。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-08-13 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.119
Cheng Hu, Song Wei, Wenbo Zhu, Boran Lv, Shuhao Li, Baiyu Liu, Guangmei Yan, Ying Liu

Aim: Muscle-invasive bladder cancer (MIBC) remains lethal despite promising oncolytic virotherapy, hindered by tumor-intrinsic resistance. This study aimed to elucidate the molecular basis underlying differential sensitivity to the oncolytic M1 virus in bladder cancer. Methods: Bladder cancer cell lines with varying sensitivity to M1 were analyzed for endoplasmic reticulum (ER) stress responses and unfolded protein response (UPR) pathway activation. IRE1α expression was modulated using small interfering RNA and a selective inhibitor. Viral cytotoxicity, replication, and apoptosis were assessed using viability assays, immunofluorescence, electron microscopy, and immunoblotting. In vivo antitumor efficacy was assessed using xenografted mice. Clinical relevance was examined using patient-derived cells and survival data from The Cancer Genome Atlas. Results: M1 virus induced ER stress and apoptosis in sensitive cells (e.g., T24, UM-UC-3) supporting viral protein expression, whereas low-sensitivity cells like EJ showed minimal response due to limited viral replication. In moderately sensitive cells, M1 replication led to viral protein accumulation, triggering IRE1α upregulation, which in turn limited further protein buildup and apoptosis. IRE1α inhibition enhanced M1-induced ER stress, apoptotic signaling, and oncolysis without affecting viral replication capacity. In vivo, M1 plus STF083010 achieved greater tumor suppression than monotherapy without added toxicity. Analysis of patient-derived cells and TCGA data further revealed downregulation of IRE1α in primary tumors and its potential association with worse prognosis. Conclusion: IRE1α modulates M1-induced viral protein accumulation and cell death. Inhibiting IRE1α enhances ER stress and potentiates the oncolytic effect of M1 virus. Targeting IRE1α may improve M1-based virotherapy outcomes in accessible tumors.

目的:肌肉浸润性膀胱癌(MIBC)仍然是致命的,尽管有很有前途的溶瘤病毒治疗,阻碍了肿瘤固有的耐药性。本研究旨在阐明膀胱癌对溶瘤M1病毒不同敏感性的分子基础。方法:分析不同M1敏感性膀胱癌细胞系内质网(ER)应激反应和未折叠蛋白反应(UPR)通路激活情况。使用小干扰RNA和选择性抑制剂调节IRE1α的表达。采用活力测定、免疫荧光、电子显微镜和免疫印迹法评估病毒的细胞毒性、复制和凋亡。采用异种移植小鼠进行体内抗肿瘤疗效评估。临床相关性检查使用患者来源的细胞和癌症基因组图谱的生存数据。结果:M1病毒在支持病毒蛋白表达的敏感细胞(如T24、UM-UC-3)中诱导内质网应激和凋亡,而低敏感性细胞如EJ由于病毒复制有限,反应最小。在中等敏感的细胞中,M1复制导致病毒蛋白积累,触发IRE1α上调,进而限制进一步的蛋白积累和细胞凋亡。IRE1α抑制增强了m1诱导的内质网应激、凋亡信号传导和肿瘤溶解,但不影响病毒复制能力。在体内,M1 + STF083010比单药治疗获得了更大的肿瘤抑制作用,且没有增加毒性。对患者源性细胞和TCGA数据的分析进一步揭示了IRE1α在原发肿瘤中的下调及其与较差预后的潜在关联。结论:IRE1α调节m1诱导的病毒蛋白积累和细胞死亡。抑制IRE1α可增强内质网应激,增强M1病毒的溶瘤作用。靶向IRE1α可能改善可及肿瘤中基于m1的病毒治疗结果。
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引用次数: 0
Corosolic acid increases the therapeutic effect of cisplatin on gastric cancer by regulating Gpx4-dependent ferroptosis. 科罗索酸通过调节gpx4依赖性铁下垂提高顺铂对胃癌的治疗效果。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-08-07 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.94
Liubing Lin, Jian Wang, Shun Sheng, Yanting Shen, Xiaolin Liu, Rongzhong Xu, Yong Li

Aim: Cisplatin serves as a primary chemotherapeutic agent in the treatment of gastric cancer (GC), but resistance to cisplatin-based chemotherapeutic regimens hampers its clinical application. Corosolic acid (CA), a natural triterpenoid, exhibits both anti-inflammatory and anti-cancer activities. However, the effect of CA on improving cisplatin resistance in GC remains unclear. The study primarily aimed to evaluate whether CA increases the therapeutic efficacy of cisplatin against GC and to reveal its underlying mechanism. Methods: Cisplatin and CA were used to treat GC cells or cisplatin-resistant AGS cells (AGS-CR), and then cell viability, apoptosis, and growth were assessed using Cell Counting Kit-8, TdT-mediated dUTP nick end labeling, and clone formation assays, respectively. Glutathione peroxidase 4 (Gpx4) expression was measured through quantitative real-time PCR and western blotting assays. Results: CA treatment induced a dose-dependent reduction in GC cell viability. The combination of cisplatin and CA resulted in enhanced cytotoxicity and pro-apoptotic effects compared to treatment with cisplatin alone. The effect of CA as a chemosensitizer in GC cells was damaged by a ferroptosis inhibitor, suggesting that CA decreased cisplatin chemoresistance by accelerating cancer cell ferroptosis. CA triggered cell ferroptosis by repressing Gpx4 expression in GC cells. Furthermore, elevated Gpx4 expression was significantly associated with poorer overall and disease-free survival. Conclusion: CA has the potential to increase cisplatin chemosensitivity in GC, and Gpx4 may represent a promising therapeutic target for its treatment.

目的:顺铂是治疗胃癌的主要化疗药物,但对以顺铂为基础的化疗方案的耐药性阻碍了其临床应用。Corosolic acid (CA)是一种天然的三萜,具有抗炎和抗癌作用。然而,CA对改善胃癌顺铂耐药的作用尚不清楚。本研究主要旨在评估CA是否能提高顺铂对胃癌的治疗效果,并揭示其潜在机制。方法:采用顺铂和CA分别处理GC细胞或顺铂耐药AGS细胞(AGS- cr),分别采用cell Counting Kit-8、tdt介导的dUTP缺口末端标记和克隆形成试验评估细胞存活率、凋亡和生长情况。采用实时荧光定量PCR和western blotting检测谷胱甘肽过氧化物酶4 (Gpx4)的表达。结果:CA处理诱导GC细胞活力呈剂量依赖性降低。与单用顺铂治疗相比,顺铂联合CA可增强细胞毒性和促凋亡作用。CA作为化疗增敏剂在胃癌细胞中的作用被铁下垂抑制剂破坏,提示CA通过加速癌细胞铁下垂来降低顺铂化疗耐药。CA通过抑制Gpx4在GC细胞中的表达触发细胞铁下垂。此外,Gpx4表达升高与较差的总生存期和无病生存期显著相关。结论:CA有可能增加GC患者的顺铂化疗敏感性,Gpx4可能是一个有前景的治疗靶点。
{"title":"Corosolic acid increases the therapeutic effect of cisplatin on gastric cancer by regulating Gpx4-dependent ferroptosis.","authors":"Liubing Lin, Jian Wang, Shun Sheng, Yanting Shen, Xiaolin Liu, Rongzhong Xu, Yong Li","doi":"10.20517/cdr.2025.94","DOIUrl":"10.20517/cdr.2025.94","url":null,"abstract":"<p><p><b>Aim:</b> Cisplatin serves as a primary chemotherapeutic agent in the treatment of gastric cancer (GC), but resistance to cisplatin-based chemotherapeutic regimens hampers its clinical application. Corosolic acid (CA), a natural triterpenoid, exhibits both anti-inflammatory and anti-cancer activities. However, the effect of CA on improving cisplatin resistance in GC remains unclear. The study primarily aimed to evaluate whether CA increases the therapeutic efficacy of cisplatin against GC and to reveal its underlying mechanism. <b>Methods:</b> Cisplatin and CA were used to treat GC cells or cisplatin-resistant AGS cells (AGS-CR), and then cell viability, apoptosis, and growth were assessed using Cell Counting Kit-8, TdT-mediated dUTP nick end labeling, and clone formation assays, respectively. Glutathione peroxidase 4 (Gpx4) expression was measured through quantitative real-time PCR and western blotting assays. <b>Results:</b> CA treatment induced a dose-dependent reduction in GC cell viability. The combination of cisplatin and CA resulted in enhanced cytotoxicity and pro-apoptotic effects compared to treatment with cisplatin alone. The effect of CA as a chemosensitizer in GC cells was damaged by a ferroptosis inhibitor, suggesting that CA decreased cisplatin chemoresistance by accelerating cancer cell ferroptosis. CA triggered cell ferroptosis by repressing Gpx4 expression in GC cells. Furthermore, elevated Gpx4 expression was significantly associated with poorer overall and disease-free survival. <b>Conclusion:</b> CA has the potential to increase cisplatin chemosensitivity in GC, and Gpx4 may represent a promising therapeutic target for its treatment.</p>","PeriodicalId":70759,"journal":{"name":"癌症耐药(英文)","volume":"8 ","pages":"40"},"PeriodicalIF":4.6,"publicationDate":"2025-08-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12366429/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144980539","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Lactylation: a novel driver of drug resistance in the tumor microenvironment. 乳酸化:肿瘤微环境中耐药的新驱动因素。
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-08-04 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.90
Chunwei Li, Ziqiang Liu, Dezheng Kong, Zhengze Li, Lifeng Li

Lactylation, a novel lactate-derived lysine post-translational modification (PTM), has emerged as a critical epigenetic regulator driving drug resistance within the tumor microenvironment (TME). This review systematically delineates the enzymatic underpinnings of lactylation, its induction via the glycolysis-lactate axis influenced by key TME features (hypoxia, inflammation), and its multifaceted roles in promoting resistance. Specifically, lactylation orchestrates transcriptional reprogramming of resistance-associated genes (e.g., oncogenes, immune checkpoints, epithelial-mesenchymal transition factors), enhances DNA damage repair capacity (e.g., via NBS1/MRE11 lactylation), activates pro-survival autophagy, and modulates immunosuppressive signaling pathways (e.g., PI3K/AKT, NF-κB, JAK/STAT). Furthermore, it facilitates critical resistance phenotypes including immune evasion, metastasis, and angiogenesis. The review summarizes emerging therapeutic strategies targeting lactylation, such as inhibition of lactate production (LDHA/LDHB), lactate transport (MCT1/4), lactyltransferases (e.g., p300), or downstream effectors, highlighting their potential to overcome multifactorial resistance. However, elucidating the context-dependent roles, crosstalk with other PTMs, and developing specific inhibitors remain crucial for translating these insights into effective clinical interventions against resistant tumors.

乳酸化是一种新型的乳酸衍生赖氨酸翻译后修饰(PTM),已成为肿瘤微环境(TME)中驱动耐药的关键表观遗传调控因子。这篇综述系统地描述了乳酸化的酶基础,它通过受关键TME特征(缺氧,炎症)影响的糖酵解-乳酸轴诱导,以及它在促进抵抗中的多方面作用。具体来说,乳酸化可协调耐药相关基因(如癌基因、免疫检查点、上皮间质转化因子)的转录重编程,增强DNA损伤修复能力(如通过NBS1/MRE11乳酸化),激活促存活自噬,调节免疫抑制信号通路(如PI3K/AKT、NF-κB、JAK/STAT)。此外,它促进了关键的抗性表型,包括免疫逃避、转移和血管生成。这篇综述总结了针对乳酸化的新兴治疗策略,如抑制乳酸生成(LDHA/LDHB)、乳酸转运(MCT1/4)、乳酸转移酶(如p300)或下游效应物,强调了它们克服多因子耐药的潜力。然而,阐明上下文依赖的作用,与其他ptm的串扰,以及开发特异性抑制剂对于将这些见解转化为针对耐药肿瘤的有效临床干预仍然至关重要。
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引用次数: 0
Effects of FAP+ cancer-associated fibroblasts on anti-PD-1 immunotherapy and CD4+ T cell polarization in gastric cancer. FAP+癌相关成纤维细胞对胃癌抗pd -1免疫治疗和CD4+ T细胞极化的影响
IF 4.6 Q1 ONCOLOGY Pub Date : 2025-07-29 eCollection Date: 2025-01-01 DOI: 10.20517/cdr.2025.97
Jing Wu, Peng-Fei Zhang, Yu Zeng, Ya-Nan Hai, Kun-Ming Zhang, Shu Dong, Ji-Chong Xu, Lan-Lin Zhang, Zhi-Xiong Wu, Hong Jiang

Aim: The immune evasion mechanisms of gastric cancer are complex, involving various cellular dysfunctions within the tumor microenvironment. Recently, there has been growing interest in how cancer-associated fibroblasts (CAFs) contribute to tumor immune evasion. However, the precise molecular pathways through which CAFs drive immune escape in the context of gastric cancer are not yet fully elucidated. Methods: The abundance of FAP+CAFs in gastric cancer tissues was assessed by immunohistochemistry (IHC), and its correlation with tumor sensitivity to PD-1 monoclonal antibody therapy was analyzed. To study the effect of FAP+CAFs on naive CD4+ T cell differentiation, co-culture experiments were conducted. The underlying molecular mechanisms were further investigated through western blotting and in vivo animal experiments. Results: FAP+CAFs were significantly increased in gastric cancer tissues resistant to PD-1 monoclonal antibody, and a positive correlation was found with Th2 cells. Additionally, the expression and secretion of IL-31 in FAP+CAFs cells were elevated. Mechanistically, IL-31 interacts with the IL-31R expressed on naive CD4+ T cells, leading to the activation of the STAT6 signaling pathway. This cascade facilitates the differentiation of naive CD4+ T cells into Th2 cells, thereby contributing to resistance against anti-PD-1 therapy in gastric cancer. Conclusion: FAP+CAFs may reduce sensitivity to anti-PD-1 therapy in gastric cancer by promoting Th2 polarization of naive CD4+ T cells via the IL-31/STAT6 signaling pathway. Targeting this axis could offer a potential strategy to improve immunotherapy outcomes, although further validation is required.

目的:胃癌的免疫逃逸机制复杂,涉及肿瘤微环境中的多种细胞功能障碍。最近,人们对癌症相关成纤维细胞(CAFs)如何促进肿瘤免疫逃逸越来越感兴趣。然而,在胃癌背景下,CAFs驱动免疫逃逸的精确分子途径尚未完全阐明。方法:采用免疫组化(IHC)方法检测胃癌组织中FAP+CAFs的丰度,并分析其与肿瘤对PD-1单克隆抗体治疗敏感性的相关性。为了研究FAP+CAFs对初始CD4+ T细胞分化的影响,我们进行了共培养实验。通过western blotting和体内动物实验进一步研究其潜在的分子机制。结果:在PD-1单克隆抗体耐药的胃癌组织中,FAP+CAFs显著升高,且与Th2细胞呈正相关。此外,FAP+CAFs细胞中IL-31的表达和分泌水平升高。从机制上讲,IL-31与初始CD4+ T细胞上表达的IL-31R相互作用,导致STAT6信号通路的激活。这种级联促进了初始CD4+ T细胞向Th2细胞的分化,从而促进了胃癌对抗pd -1治疗的抵抗。结论:FAP+CAFs可能通过IL-31/STAT6信号通路促进初始CD4+ T细胞Th2极化,从而降低胃癌患者对抗pd -1治疗的敏感性。虽然还需要进一步的验证,但靶向这个轴可能提供改善免疫治疗结果的潜在策略。
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引用次数: 0
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癌症耐药(英文)
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