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Cities Shape the Diversity and Spread of Nonnative Species 城市影响外来物种的多样性和传播
IF 11.8 1区 生物学 Q1 ECOLOGY Pub Date : 2024-08-02 DOI: 10.1146/annurev-ecolsys-102722-012749
Luke J. Potgieter, Daijiang Li, Benjamin Baiser, Ingolf Kühn, Myla F.J. Aronson, Marta Carboni, Laura Celesti-Grapow, Ana Carolina L. de Matos, Zdeňka Lososová, Flavia A. Montaño-Centellas, Petr Pyšek, David M. Richardson, Toby P.N. Tsang, Rafael D. Zenni, Marc W. Cadotte
The globalization of trade and increased human mobility have facilitated the introduction and spread of nonnative species, posing significant threats to biodiversity and human well-being. As centers of global trade and human populations, cities are foci for the introduction, establishment, and spread of nonnative species. We present a global synthesis of urban characteristics that drive biological invasions within and across cities, focusing on four axes: (a) connectivity, (b) physical properties, (c) culture and socioeconomics, and (d) biogeography and climate. Urban characteristics such as increased connectivity within and among cities, city size and age, and wealth emerged as important drivers of nonnative species diversity and spread, while the relative importance of biogeographic and climate drivers varied considerably. Elaborating how these characteristics shape biological invasions in cities is crucial for designing and implementing strategies to mitigate the impacts of invasions on ecological systems and human well-being.
贸易全球化和人类流动性的增加促进了非本地物种的引入和传播,对生物多样性和人类福祉构成了重大威胁。作为全球贸易和人口的中心,城市是非本地物种引进、建立和传播的焦点。我们在全球范围内综述了驱动城市内和城市间生物入侵的城市特征,重点关注以下四个方面:(a)连通性;(b)物理特性;(c)文化和社会经济;以及(d)生物地理学和气候。城市内部和城市之间的连通性、城市规模和年龄以及财富等城市特征成为非本地物种多样性和传播的重要驱动因素,而生物地理学和气候驱动因素的相对重要性则有很大差异。阐明这些特征如何影响城市中的生物入侵,对于设计和实施减轻入侵对生态系统和人类福祉影响的战略至关重要。
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引用次数: 0
The Role of Deadwood in the Carbon Cycle: Implications for Models, Forest Management, and Future Climates 枯木在碳循环中的作用:对模型、森林管理和未来气候的影响
IF 11.8 1区 生物学 Q1 ECOLOGY Pub Date : 2024-08-02 DOI: 10.1146/annurev-ecolsys-110421-102327
Baptiste J. Wijas, Steven D. Allison, Amy T. Austin, William K. Cornwell, J. Hans C. Cornelissen, Paul Eggleton, Shawn Fraver, Mark K.J. Ooi, Jeff R. Powell, Christopher W. Woodall, Amy E. Zanne
Deadwood represents a significant carbon pool and unique biodiversity reservoir in forests and savannas but has been largely overlooked until recently. Storage and release of carbon from deadwood is controlled by interacting decomposition drivers including biotic consumers (animals and microbes) and abiotic factors (water, fire, sunlight, and freeze–thaw). Although previous research has focused mainly on forests, we synthesize deadwood studies across diverse ecosystems with woody vegetation. As changing climates and land-use practices alter the landscape, we expect accelerating but variable rates of inputs and outputs from deadwood pools. Currently, Earth system models implicitly represent only microbial consumers as drivers of wood decomposition; we show that many other factors influence deadwood pools. Forest management practices increasingly recognize deadwood as an important contributor to forest dynamics, biodiversity, and carbon budgets. Together, emerging knowledge from modeling and management suggests a growing need for additional research on deadwood contributions to carbon storage and greenhouse gas emissions.
枯木是森林和稀树草原中一个重要的碳库和独特的生物多样性宝库,但直到最近才被人们所重视。枯死木碳的储存和释放受相互影响的分解驱动因素控制,包括生物消费者(动物和微生物)和非生物因素(水、火、阳光和冻融)。虽然以前的研究主要集中在森林,但我们综合了对多种木本植被生态系统的枯木研究。随着气候的变化和土地利用方式的改变,我们预计枯落物资源库的输入和输出速度会加快,但也会发生变化。目前,地球系统模型只将微生物消费者隐含为木材分解的驱动因素;我们的研究表明,许多其他因素也会影响枯木池。森林管理实践越来越认识到枯木是森林动态、生物多样性和碳预算的重要贡献者。从建模和管理中获得的新知识表明,越来越需要对枯木对碳储存和温室气体排放的贡献进行更多的研究。
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引用次数: 0
Ecology and Evolution of the Social Microbiome 社会微生物组的生态与进化
IF 11.8 1区 生物学 Q1 ECOLOGY Pub Date : 2024-08-01 DOI: 10.1146/annurev-ecolsys-102622-030749
Reena Debray, Jenny Tung, Elizabeth A. Archie
Animals with close social relationships often have similar microbiomes. These socially structured microbiomes can arise through multiple mechanisms that are often difficult to disentangle, including transmission between social partners or via socially structured, shared environments. Here, we review evidence for socially structured microbiomes and propose methods to differentiate the mechanisms that give rise to them. We discuss the evolutionary implications of these mechanisms for both hosts and their microbiomes, including the possibility that social transmission selects for host-specialized microbiomes. We conclude by identifying outstanding questions related to social microbiomes and their implications for social evolution. We identify new or underutilized approaches like longitudinal study designs, strain-sharing analysis, and culture-based characterization to address these outstanding questions.
具有密切社会关系的动物通常具有相似的微生物组。这些社会结构微生物组可能通过多种机制产生,而这些机制往往难以区分,包括社会伙伴之间的传播或通过社会结构的共享环境。在这里,我们回顾了社会结构微生物组的证据,并提出了区分微生物组产生机制的方法。我们讨论了这些机制对宿主及其微生物组的进化影响,包括社会传播选择宿主特化微生物组的可能性。最后,我们确定了与社会微生物组有关的未决问题及其对社会进化的影响。我们确定了新的或未充分利用的方法,如纵向研究设计、菌株共享分析和基于培养的特征描述,以解决这些悬而未决的问题。
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引用次数: 0
The Invasion Ecology of Mutualism 互助生态学的入侵
IF 11.8 1区 生物学 Q1 ECOLOGY Pub Date : 2024-07-29 DOI: 10.1146/annurev-ecolsys-102622-031210
Marcelo A. Aizen, Agostina Torres
Successful invasive species commonly depend on the establishment of mutualistic interactions with native and nonnative biota. In turn, invasive species can affect native mutualisms and community stability. Here, we examine different forms of mutualist acquisition by invasive species and the causes and consequences of mutualism abandonment for invasion processes. Additionally, we delve into the quantitative and qualitative effects of invaders on native biota via mutualism disruption that can occur through direct and diverse indirect pathways. These effects of invasive species on native biota via mutualistic interactions can often be a consequence of the invaders’ abundance, which should be considered a prime predictor when evaluating the impact of invasive species on native mutualisms and community stability. We propose that the ecological as well as the evolutionary consequences of mutualism disruption and switches caused by invasive species can play crucial roles in determining future biodiversity.
成功的入侵物种通常依赖于与本地和非本地生物群落建立互生互动关系。反过来,入侵物种也会影响本地互惠关系和群落的稳定性。在此,我们将研究入侵物种获取互惠物的不同形式,以及入侵过程中放弃互惠物的原因和后果。此外,我们还将深入研究入侵者通过直接和多种间接途径破坏互生关系对本地生物群落造成的定量和定性影响。入侵物种通过互生相互作用对本地生物群的这些影响往往是入侵者数量的结果,在评估入侵物种对本地互生关系和群落稳定性的影响时,应将入侵者数量作为主要预测指标。我们认为,入侵物种造成的互生关系破坏和转换所带来的生态和进化后果在决定未来生物多样性方面起着至关重要的作用。
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引用次数: 0
A Critical Evaluation of Network Approaches for Studying Species Interactions 对研究物种相互作用的网络方法的严格评估
IF 11.8 1区 生物学 Q1 ECOLOGY Pub Date : 2024-07-26 DOI: 10.1146/annurev-ecolsys-102722-021904
Nico Blüthgen, Michael Staab
Ecological networks of species interactions are popular and provide powerful analytical tools for understanding variation in community structure and ecosystem functioning. However, network analyses and commonly used metrics such as nestedness and connectance have also attracted criticism. One major concern is that observed patterns are misinterpreted as niche properties such as specialization, whereas they may instead merely reflect variation in sampling, abundance, and/or diversity. As a result, studies potentially draw flawed conclusions about ecological function, stability, or coextinction risks. We highlight potential biases in analyzing and interpreting species-interaction networks and review the solutions available to overcome them, among which we particularly recommend the use of null models that account for species abundances. We show why considering variation across species and networks is important for understanding species interactions and their consequences. Network analyses can advance knowledge on the principles of species interactions but only when judiciously applied.
物种相互作用的生态网络很受欢迎,为了解群落结构和生态系统功能的变化提供了强大的分析工具。然而,网络分析和常用指标(如嵌套度和连接度)也招致了批评。一个主要的担忧是,观察到的模式会被误解为特化等生态位属性,而它们可能仅仅反映了取样、丰度和/或多样性的变化。因此,研究可能会对生态功能、稳定性或共灭绝风险得出错误的结论。我们强调了在分析和解释物种相互作用网络时可能出现的偏差,并回顾了克服这些偏差的解决方案,其中我们特别推荐使用考虑物种丰度的空模型。我们说明了为什么考虑物种和网络间的差异对于理解物种相互作用及其后果非常重要。网络分析可以促进对物种相互作用原理的了解,但前提是必须谨慎应用。
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引用次数: 0
Observed and Potential Range Shifts of Native and Nonnative Species with Climate Change 观测到的和潜在的本地和外来物种随气候变化而发生的分布范围变化
IF 11.8 1区 生物学 Q1 ECOLOGY Pub Date : 2024-06-17 DOI: 10.1146/annurev-ecolsys-102722-013135
Bethany A. Bradley, Evelyn M. Beaury, Belinda Gallardo, Inés Ibáñez, Catherine Jarnevich, Toni Lyn Morelli, Helen R. Sofaer, Cascade J.B. Sorte, Montserrat Vilà
There is broad concern that the range shifts of global flora and fauna will not keep up with climate change, increasing the likelihood of population declines and extinctions. Many populations of nonnative species already have advantages over native species, including widespread human-aided dispersal and release from natural enemies. But do nonnative species also have an advantage with climate change? Here, we review observed and potential range shifts for native and nonnative species globally. We show that nonnative species are expanding their ranges 100 times faster than native species, reflecting both traits that enable rapid spread and ongoing human-mediated introduction. We further show that nonnative species have large potential ranges and range expansions with climate change, likely due to a combination of widespread introduction and broader climatic tolerances. With faster spread rates and larger potential to persist or expand, nonnative populations have a decided advantage in a changing climate.
人们普遍担心,全球动植物的分布范围变化跟不上气候变化的步伐,从而增加了种群减少和灭绝的可能性。与本地物种相比,许多非本地物种种群已经拥有优势,包括广泛的人类辅助传播和天敌释放。但是,非本地物种在气候变化中也有优势吗?在这里,我们回顾了在全球范围内观察到的和潜在的本地和非本地物种的分布范围变化。我们发现,非本地物种的分布范围扩大速度是本地物种的 100 倍,这既反映了能够快速传播的特性,也反映了以人类为媒介的不断引入。我们进一步表明,非本地物种的潜在分布范围和分布范围随着气候变化而扩大,这可能是由于广泛引入和更广泛的气候耐受性共同作用的结果。凭借更快的传播速度和更大的持续或扩展潜力,非本地种群在不断变化的气候中具有决定性的优势。
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引用次数: 0
Phylogenetic Insights into Diversification 系统发育对多样化的启示
IF 11.8 1区 生物学 Q1 ECOLOGY Pub Date : 2024-06-17 DOI: 10.1146/annurev-ecolsys-102722-020508
Hélène Morlon, Jérémy Andréoletti, Joëlle Barido-Sottani, Sophia Lambert, Benoît Perez-Lamarque, Ignacio Quintero, Viktor Senderov, Pierre Veron
Species diversification—the balance between speciation and extinction—is fundamental to our understanding of how species richness varies in space and time and throughout the Tree of Life. Phylogenetic approaches provide insights into species diversification by enabling support for alternative diversification scenarios to be compared and speciation and extinction rates to be estimated. Here, we review the current toolkit available for conducting such analyses. We first highlight how modeling efforts over the past decade have fostered a notable transition from overly simplistic evolutionary scenarios to a more nuanced understanding of how and why diversification rates vary through time and across lineages. Using the latitudinal diversity gradient as a case study, we then illustrate the impact that modeling choices can have on the results obtained. Finally, we review recent progress in two areas that are still lagging behind: phylogenetic insights into microbial diversification and the speciation process.
物种多样化--物种分化与灭绝之间的平衡--是我们了解物种丰富度在空间和时间上以及在整个生命之树上如何变化的基础。通过系统发育方法,我们可以比较不同的物种多样化方案,并估算物种的分化和灭绝率,从而深入了解物种多样化。在此,我们回顾了目前可用于进行此类分析的工具包。我们首先强调了过去十年间的建模工作如何促进了从过于简单的进化情景到更加细致地理解多样化率如何以及为何随时间和不同品系而变化的显著转变。然后,我们以纬度多样性梯度为例,说明了建模选择对结果的影响。最后,我们回顾了在两个仍然落后的领域取得的最新进展:对微生物多样化和物种形成过程的系统发育研究。
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引用次数: 0
Patterns and Evolutionary Consequences of Pleiotropy 多效性的模式和进化结果
1区 生物学 Q1 Environmental Science Pub Date : 2023-11-02 DOI: 10.1146/annurev-ecolsys-022323-083451
Jianzhi Zhang
Pleiotropy refers to the phenomenon of one gene or one mutation affecting multiple phenotypic traits. While the concept of pleiotropy is as old as Mendelian genetics, functional genomics has finally allowed the first glimpses of the extent of pleiotropy for a large fraction of genes in a genome. After describing conceptual and operational difficulties in quantifying pleiotropy and the pros and cons of various methods for measuring pleiotropy, I review empirical data on pleiotropy, which generally show an L-shaped distribution of the degree of pleiotropy (i.e., the number of traits affected), with most genes having low pleiotropy. I then review the current understanding of the molecular basis of pleiotropy. In the rest of the review, I discuss evolutionary consequences of pleiotropy, focusing on advances in topics including the cost of complexity, regulatory versus coding evolution, environmental pleiotropy and adaptation, evolution of ageing and other seemingly harmful traits, and evolutionary resolution of pleiotropy.
多效性是指一个基因或一个突变影响多个表型性状的现象。虽然多效性的概念与孟德尔遗传学一样古老,但功能基因组学终于让人们第一次看到了基因组中大部分基因的多效性程度。在描述了量化多效性的概念和操作困难以及各种测量多效性方法的优缺点之后,我回顾了多效性的经验数据,这些数据通常显示多效性程度(即受影响性状的数量)呈l形分布,大多数基因具有低多效性。然后回顾了目前对多效性分子基础的理解。在接下来的评论中,我将讨论多效性的进化后果,重点关注以下主题的进展:复杂性的代价、调控与编码进化、环境多效性和适应、衰老和其他看似有害的特征的进化,以及多效性的进化解决方案。
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引用次数: 2
What Amphibians Can Teach Us About the Evolution of Parental Care. 两栖动物能告诉我们什么是父母关爱的进化。
IF 11.2 1区 生物学 Q1 ECOLOGY Pub Date : 2023-11-01 Epub Date: 2023-08-04 DOI: 10.1146/annurev-ecolsys-102221-050519
Eva Ringler, Bibiana Rojas, Jennifer L Stynoski, Lisa M Schulte

Parenting is considered a key evolutionary innovation that contributed to the diversification and expansion of vertebrates. However, we know little about how such diversity evolved. Amphibians are an ideal group in which to identify the ecological factors that have facilitated or constrained the evolution of different forms of parental care. Among, but also within, the three amphibian orders-Anura, Caudata, and Gymnophiona-there is a high level of variation in habitat use, fertilization mode, mating systems, and parental sex roles. Recent work using broad phylogenetic, experimental, and physiological approaches has helped to uncover the factors that have selected for the evolution of care and transitions between different forms of parenting. Here, we highlight the exceptional diversity of amphibian parental care, emphasize the unique opportunities this group offers for addressing key questions about the evolution of parenting, and give insights into promising novel directions of research.

养育子女被认为是脊椎动物进化过程中的一项重要创新,它促进了脊椎动物的多样化和扩展。然而,我们对这种多样性是如何进化的知之甚少。两栖动物是一个理想的群体,可以从中找出促进或限制不同形式的父母照料进化的生态因素。在两栖动物的三个目--两栖纲(Anura)、腔肠纲(Caudata)和两栖纲(Gymnophiona)中,以及在其内部,栖息地的利用、受精模式、交配系统和父母的性别角色都存在很大的差异。最近的研究利用广泛的系统发生学、实验和生理学方法,帮助揭示了选择照料和不同养育形式之间过渡的进化因素。在此,我们将重点介绍两栖动物亲代照料的特殊多样性,强调这一群体为解决有关亲代照料进化的关键问题所提供的独特机会,并对有希望的新研究方向提出见解。
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引用次数: 0
How Whales Dive, Feast, and Fast: The Ecophysiological Drivers and Limits of Foraging in the Evolution of Cetaceans 鲸鱼如何潜水,盛宴和快速:鲸类动物进化中觅食的生态生理驱动因素和限制
IF 11.8 1区 生物学 Q1 Environmental Science Pub Date : 2023-08-29 DOI: 10.1146/annurev-ecolsys-102220-025458
J. Goldbogen, N. Pyenson, P. Madsen
Whales are an extraordinary study group for questions about ecology and evolution because their combinations of extreme body sizes and unique foraging strategies are unparalleled among animals. From a terrestrial ancestry, whales evolved specialized oceanic foraging mechanisms that characterize the two main groups of living cetaceans: echolocation by toothed whales and bulk filter feeding by baleen whales. In toothed whales, lineage-specific increases in body size, enhanced diving capacity, and echolocation enable them to hunt the most abundant prey on the planet: deep-sea fish and cephalopods. Even greater body size increases, along with filter feeding and fasting capacity, permit large baleen whales to migrate long distances and exploit epipelagic patches of schooling prey, such as krill or fish, which are highly abundant but ephemeral. For both groups, prey abundance and distribution limits foraging performance, yielding divergent energetic niches that have shaped their convergent evolution to gigantism. Expected final online publication date for the Annual Review of Ecology, Evolution, and Systematics, Volume 54 is November 2023. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
鲸鱼是研究生态学和进化问题的一个非凡群体,因为它们的极端体型和独特的觅食策略在动物中是无与伦比的。从陆地祖先开始,鲸鱼进化出了专门的海洋觅食机制,这是两种主要的鲸类动物的特征:齿鲸的回声定位和须鲸的大量过滤进食。在齿鲸中,特定血统的体型增加,潜水能力增强,回声定位使它们能够捕食地球上最丰富的猎物:深海鱼类和头足类动物。更大的体型增加,以及滤食和禁食能力,使大型须鲸能够长距离迁徙,并利用浮游猎物,如磷虾或鱼类,这些猎物非常丰富,但转瞬即逝。对于这两个种群来说,猎物的丰度和分布限制了它们的觅食表现,产生了不同的能量生态位,这些生态位塑造了它们向巨型动物的趋同进化。预计《生态、进化和分类学年度评论》第54卷的最终在线出版日期是2023年11月。修订后的估计数请参阅http://www.annualreviews.org/page/journal/pubdates。
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引用次数: 1
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Annual Review of Ecology, Evolution, and Systematics
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