The present study for the first time tested the effect of repeated mild air exposure stress (RMS, 150 min) every four days on the growth, survival rate after acute air exposure, and relative pathways in female and male green mud crab (Scylla paramamosain) after 63 days. Further, to test the tolerance of these groups to the acute air exposure, crabs were exposed to the air until death and sampled after 24 h for omics analysis. The results indicated that RMS did not significantly decline growth, molting rate, and survival after 63 days. However, after acute air exposure (AAE) treatments, animals exposed to RMS, regardless of gender, survived longer than controls. Females and males showed different profiles of transcriptomics, so energy production relative pathways were enriched in all male tissues. Protein processing in the endoplasmic reticulum (ER) and apoptosis enriched with RMS are other evidence that the RMS group shifted to using available energy resources in the body during the farming period. After 24 h AAE, RMS groups showed upregulation of protein processing in the ER, plus DNA replication. Suppression of the biosynthesis of amino acids and energy production was observed as well. Females suppressed the biosynthesis of amino acids and energy production pathways, as well as other pathways related to amino acid metabolism. Female RMS did not show completely the same results, and ribosome was the main pathway that was downregulated in gill and muscle, as well as the biosynthesis of amino acids in hepatopancreas. Male and male RMS showed a similar response, and downregulation of protein synthesis and energy production pathways was observed. In conclusion, amino acid metabolism, energy production, and DNA replication were the key to air exposure response, and RMS could improve crab tolerance to stress.
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