The realization of brain-scale spiking neural networks (SNNs) is impeded by power constraints and low integration density. To address these challenges, multi-core SNNs are utilized to emulate numerous neurons with high energy efficiency, where spike packets are routed through a network-on-chip (NoC). However, the information can be lost in the NoC under high spike traffic conditions, leading to performance degradation. This work presents NEXUS, a 16-core SNN with a diamond-shaped NoC topology fabricated in 28-nm CMOS technology. It integrates 4096 leaky integrate-and-fire (LIF) neurons with 1M 4-bit synaptic weights, occupying an area of 2.16 mm2. The proposed NoC architecture is scalable to any network size, ensuring no data loss due to contending packets with a maximum routing latency of 5.1μs for 16 cores. The proposed congestion management method eliminates the need for FIFO in routers, resulting in a compact router footprint of 0.001 mm2. The proposed neurosynaptic core allows for increasing the processing speed by up to 8.5× depending on input sparsity. The SNN achieves a peak throughput of 4.7 GSOP/s at 0.9 V, consuming a minimum energy per synaptic operation (SOP) of 3.3 pJ at 0.55 V. A 4-layer feed-forward network is mapped onto the chip, classifying MNIST digits with 92.3% accuracy at 8.4Kclassification/ s and consuming 2.7-μJ/classification. Additionally, an audio recognition task mapped onto the chip achieves 87.4% accuracy at 215-μJ/classification.
{"title":"NEXUS: A 28nm 3.3pJ/SOP 16-Core Spiking Neural Network with a Diamond Topology for Real-Time Data Processing.","authors":"Maryam Sadeghi, Yasser Rezaeiyan, Dario Fernandez Khatiboun, Sherif Eissa, Federico Corradi, Charles Augustine, Farshad Moradi","doi":"10.1109/TBCAS.2024.3452635","DOIUrl":"10.1109/TBCAS.2024.3452635","url":null,"abstract":"<p><p>The realization of brain-scale spiking neural networks (SNNs) is impeded by power constraints and low integration density. To address these challenges, multi-core SNNs are utilized to emulate numerous neurons with high energy efficiency, where spike packets are routed through a network-on-chip (NoC). However, the information can be lost in the NoC under high spike traffic conditions, leading to performance degradation. This work presents NEXUS, a 16-core SNN with a diamond-shaped NoC topology fabricated in 28-nm CMOS technology. It integrates 4096 leaky integrate-and-fire (LIF) neurons with 1M 4-bit synaptic weights, occupying an area of 2.16 mm2. The proposed NoC architecture is scalable to any network size, ensuring no data loss due to contending packets with a maximum routing latency of 5.1μs for 16 cores. The proposed congestion management method eliminates the need for FIFO in routers, resulting in a compact router footprint of 0.001 mm<sup>2</sup>. The proposed neurosynaptic core allows for increasing the processing speed by up to 8.5× depending on input sparsity. The SNN achieves a peak throughput of 4.7 GSOP/s at 0.9 V, consuming a minimum energy per synaptic operation (SOP) of 3.3 pJ at 0.55 V. A 4-layer feed-forward network is mapped onto the chip, classifying MNIST digits with 92.3% accuracy at 8.4Kclassification/ s and consuming 2.7-μJ/classification. Additionally, an audio recognition task mapped onto the chip achieves 87.4% accuracy at 215-μJ/classification.</p>","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"PP ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142116468","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
GCOC is a genome classification system-on-chip (SoC) that classifies genomes by k-mer matching, an approach that divides a DNA query sequence into a set of short DNA fragments of size k, which are searched in a reference genome database, with the underlying assumption that sequenced DNA reads of the same organism (or its close variants) share most of such k-mers. At the core of GCOC is a similarity, or approximate search-capable Content Addressable Memory (SAS-CAM), which in addition to exact match, also supports approximate, or Hamming distance tolerant search. Classification operation is controlled by an embedded RISC-V processor. GCOC classification platform was designed and manufactured in a commercial 65nm process. We conduct a thorough analysis of GCOC classification efficiency as well as its performance, silicon area, and power consumption using silicon measurements. GCOC classifies 769.2K short DNA reads/sec. The silicon area of GCOC SoC is 3.12mm2 and its power consumption is 1.27mW. We envision GCOC deployed as a field (for example at points of care) portable classifier where the classification is required to be real-time, easy to operate and energy efficient.
GCOC 是一种片上基因组分类系统 (SoC),它通过 k-mer 匹配对基因组进行分类,这种方法是将 DNA 查询序列分成一组大小为 k 的短 DNA 片段,然后在参考基因组数据库中进行搜索,其基本假设是同一生物体(或其近似变种)的 DNA 测序读数共享这些 k-mer 中的大部分。GCOC 的核心是一个具有相似性或近似搜索能力的内容寻址存储器(SAS-CAM),它除了支持精确匹配外,还支持近似搜索或汉明距离容差搜索。分类操作由嵌入式 RISC-V 处理器控制。GCOC 分类平台采用 65 纳米商用工艺设计和制造。我们通过硅测量对 GCOC 的分类效率及其性能、硅面积和功耗进行了全面分析。GCOC 每秒可分类 769.2K 个短 DNA 读数。GCOC SoC 的硅面积为 3.12 平方毫米,功耗为 1.27 毫瓦。我们设想将 GCOC 部署为现场(例如医疗点)便携式分类器,要求分类实时、操作简便且节能。
{"title":"GCOC: A Genome Classifier-On-Chip based on Similarity Search Content Addressable Memory.","authors":"Yuval Harary, Paz Snapir, Shir Siman Tov, Chen Kruphman, Eyal Rechef, Zuher Jahshan, Esteban Garzon, Leonid Yavits","doi":"10.1109/TBCAS.2024.3449788","DOIUrl":"https://doi.org/10.1109/TBCAS.2024.3449788","url":null,"abstract":"<p><p>GCOC is a genome classification system-on-chip (SoC) that classifies genomes by k-mer matching, an approach that divides a DNA query sequence into a set of short DNA fragments of size k, which are searched in a reference genome database, with the underlying assumption that sequenced DNA reads of the same organism (or its close variants) share most of such k-mers. At the core of GCOC is a similarity, or approximate search-capable Content Addressable Memory (SAS-CAM), which in addition to exact match, also supports approximate, or Hamming distance tolerant search. Classification operation is controlled by an embedded RISC-V processor. GCOC classification platform was designed and manufactured in a commercial 65nm process. We conduct a thorough analysis of GCOC classification efficiency as well as its performance, silicon area, and power consumption using silicon measurements. GCOC classifies 769.2K short DNA reads/sec. The silicon area of GCOC SoC is 3.12mm<sup>2</sup> and its power consumption is 1.27mW. We envision GCOC deployed as a field (for example at points of care) portable classifier where the classification is required to be real-time, easy to operate and energy efficient.</p>","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"PP ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142086424","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-28DOI: 10.1109/TBCAS.2024.3450843
Aditi Jain, Saeromi Chung, Eliah Aronoff Spencer, Drew A Hall
This paper presents a 16×20 CMOS biosensor array based on electrochemical impedance spectroscopy (EIS), a highly sensitive label-free technique for rapid disease detection at point-of-care. This high-density system implements a polar-mode detection with phase-only EIS measurement over a 5 kHz - 1 MHz frequency range. The design features predominantly digital readout circuitry, ensuring scalability with technology, along with a load-compensated transimpedance amplifier at the front, all within a 140×140 μm2; pixel. The architecture enables in-pixel digitization and accumulation, which increases the SNR by 10 dB for each 10× increase in readout time. Implemented in a 180 nm CMOS process, the 3×4 mm2 chip achieves state-of-the-art performance with an rms phase error of 0.035% at 100 kHz through a duty-cycle insensitive phase detector and one of the smallest per pixel areas with in-pixel quantization.
{"title":"An Electrochemical CMOS Biosensor Array Using Phase-Only Modulation With 0.035% Phase Error And In-Pixel Averaging.","authors":"Aditi Jain, Saeromi Chung, Eliah Aronoff Spencer, Drew A Hall","doi":"10.1109/TBCAS.2024.3450843","DOIUrl":"https://doi.org/10.1109/TBCAS.2024.3450843","url":null,"abstract":"<p><p>This paper presents a 16×20 CMOS biosensor array based on electrochemical impedance spectroscopy (EIS), a highly sensitive label-free technique for rapid disease detection at point-of-care. This high-density system implements a polar-mode detection with phase-only EIS measurement over a 5 kHz - 1 MHz frequency range. The design features predominantly digital readout circuitry, ensuring scalability with technology, along with a load-compensated transimpedance amplifier at the front, all within a 140×140 μm<sup>2</sup>; pixel. The architecture enables in-pixel digitization and accumulation, which increases the SNR by 10 dB for each 10× increase in readout time. Implemented in a 180 nm CMOS process, the 3×4 mm<sup>2</sup> chip achieves state-of-the-art performance with an rms phase error of 0.035% at 100 kHz through a duty-cycle insensitive phase detector and one of the smallest per pixel areas with in-pixel quantization.</p>","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"PP ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142086423","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Wearable devices with continuous monitoring capabilities are critical for the daily detection of epileptic seizures, as they provide users with accurate and comprehensible analytical results. However, current AI classifiers rely on a two-stage recognition process for continuous monitoring, which only reduces operation time but remains challenged by the high cost of additional hardware. To address this problem, this article proposes a novel fusion architecture for AI processors, which enables event-triggered cross-paradigm integration and computation. Our method introduces a distributed-aggregated classification architecture (D-ACA) that facilitates the reuse of hardware resources across two-stage recognition, thereby obviating the need for standby hardware and enhancing energy efficiency. Integrating a non-encoding biomedical circuit method based on spiking neural networks (SNNs), the architecture eliminates encoded neurons at the hardware level, significantly optimizing energy consumption and hardware resource utilization. Additionally, we develop a configurable and highly flexible control method that supports various neuron modules, enabling continuous detection of epileptic seizures and activating high-precision recognition upon event detection. Finally, we implement the design on the Xilinx ZCU 102 FPGA board, where the AI processor achieves a high classification accuracy of 98.1% while consuming extremely low classification energy (3.73 $mu$J per classification).
{"title":"Low-Power and Low-Cost AI Processor With Distributed-Aggregated Classification Architecture for Wearable Epilepsy Seizure Detection","authors":"Qiang Zhang;Mingyue Cui;Yue Liu;Weichong Chen;Zhiyi Yu","doi":"10.1109/TBCAS.2024.3450896","DOIUrl":"10.1109/TBCAS.2024.3450896","url":null,"abstract":"Wearable devices with continuous monitoring capabilities are critical for the daily detection of epileptic seizures, as they provide users with accurate and comprehensible analytical results. However, current AI classifiers rely on a two-stage recognition process for continuous monitoring, which only reduces operation time but remains challenged by the high cost of additional hardware. To address this problem, this article proposes a novel fusion architecture for AI processors, which enables event-triggered cross-paradigm integration and computation. Our method introduces a distributed-aggregated classification architecture (D-ACA) that facilitates the reuse of hardware resources across two-stage recognition, thereby obviating the need for standby hardware and enhancing energy efficiency. Integrating a non-encoding biomedical circuit method based on spiking neural networks (SNNs), the architecture eliminates encoded neurons at the hardware level, significantly optimizing energy consumption and hardware resource utilization. Additionally, we develop a configurable and highly flexible control method that supports various neuron modules, enabling continuous detection of epileptic seizures and activating high-precision recognition upon event detection. Finally, we implement the design on the Xilinx ZCU 102 FPGA board, where the AI processor achieves a high classification accuracy of 98.1% while consuming extremely low classification energy (3.73 <inline-formula><tex-math>$mu$</tex-math></inline-formula>J per classification).","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"19 1","pages":"28-39"},"PeriodicalIF":0.0,"publicationDate":"2024-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142086425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In recent years, pulsed magnetic field (PMF) have attracted significant attention as a non-invasive electroporation method in the biomedical field. To further explore the biomedical effects generated by oscillating PMF, we designed a novel PMF generator for biomedical research. Based on resonance principles, the designed generator outputs sinusoidal oscillating PMF. To validate the feasibility and application value of the designed topology, a miniaturized platform was constructed using a selected multi-turn solenoid coil. The output performance of the generator was tested under different discharge voltage levels. The results revealed that the current multiplication factor remained consistently around 2 times, with the energy efficiency and circuit quality factor maintained at 82% and above 4.5, respectively. In addition, the generator's ability to flexibly modulate the number of pulse oscillations was demonstrated. The compatibility of the designed coil parameters and generator circuit parameters was analyzed, with tests on the effects of coil resistance and switch action time on the generator's output performance. Based on the magnetic field action platform, a simulation model of the actual scale coil was established. The spatial and temporal distribution of the magnetic field, induced electric field, and power transmission in the target area were described from multiple angles. Finally, biological experiments conducted using the constructed generator revealed the synergistic effect of sinusoidal oscillating PMF combined with drugs in tumor cell killing.
{"title":"Parallel Resonant Magnetic Field Generator for Biomedical Applications.","authors":"Yuan Lei, Shoulong Dong, Runze Liang, Sizhe Xiang, Qinyu Huang, Junhao Ma, Hongyu Kou, Liang Yu, Chenguo Yao","doi":"10.1109/TBCAS.2024.3450881","DOIUrl":"https://doi.org/10.1109/TBCAS.2024.3450881","url":null,"abstract":"<p><p>In recent years, pulsed magnetic field (PMF) have attracted significant attention as a non-invasive electroporation method in the biomedical field. To further explore the biomedical effects generated by oscillating PMF, we designed a novel PMF generator for biomedical research. Based on resonance principles, the designed generator outputs sinusoidal oscillating PMF. To validate the feasibility and application value of the designed topology, a miniaturized platform was constructed using a selected multi-turn solenoid coil. The output performance of the generator was tested under different discharge voltage levels. The results revealed that the current multiplication factor remained consistently around 2 times, with the energy efficiency and circuit quality factor maintained at 82% and above 4.5, respectively. In addition, the generator's ability to flexibly modulate the number of pulse oscillations was demonstrated. The compatibility of the designed coil parameters and generator circuit parameters was analyzed, with tests on the effects of coil resistance and switch action time on the generator's output performance. Based on the magnetic field action platform, a simulation model of the actual scale coil was established. The spatial and temporal distribution of the magnetic field, induced electric field, and power transmission in the target area were described from multiple angles. Finally, biological experiments conducted using the constructed generator revealed the synergistic effect of sinusoidal oscillating PMF combined with drugs in tumor cell killing.</p>","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"PP ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142086426","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-21DOI: 10.1109/TBCAS.2024.3437556
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Pub Date : 2024-08-21DOI: 10.1109/TBCAS.2024.3437552
{"title":"IEEE Transactions on Biomedical Circuits and Systems Publication Information","authors":"","doi":"10.1109/TBCAS.2024.3437552","DOIUrl":"https://doi.org/10.1109/TBCAS.2024.3437552","url":null,"abstract":"","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"18 4","pages":"C2-C2"},"PeriodicalIF":0.0,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10643418","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142021654","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-21DOI: 10.1109/TBCAS.2024.3434009
Chung-Chih Hung;Mohamed Atef;Vanessa Chen
The 12 articles in this special issue were presented at the 2023 IEEE Biomedical Circuits and Systems Conference (BioCAS) in Toronto, Canada, from October 19–21, 2023. BioCAS 2023 was jointly sponsored by the IEEE Circuits and Systems (CAS) Society, IEEE Solid-State Circuits (SSC) Society, and the IEEE Engineering in Medicine and Biology (EMB) Society.
{"title":"Guest Editorial: Special Issue on Selected Articles From IEEE BioCAS 2023","authors":"Chung-Chih Hung;Mohamed Atef;Vanessa Chen","doi":"10.1109/TBCAS.2024.3434009","DOIUrl":"https://doi.org/10.1109/TBCAS.2024.3434009","url":null,"abstract":"The 12 articles in this special issue were presented at the 2023 IEEE Biomedical Circuits and Systems Conference (BioCAS) in Toronto, Canada, from October 19–21, 2023. BioCAS 2023 was jointly sponsored by the IEEE Circuits and Systems (CAS) Society, IEEE Solid-State Circuits (SSC) Society, and the IEEE Engineering in Medicine and Biology (EMB) Society.","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"18 4","pages":"718-719"},"PeriodicalIF":0.0,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10643421","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142021634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-21DOI: 10.1109/TBCAS.2024.3437554
{"title":"IEEE Circuits and Systems Society Information","authors":"","doi":"10.1109/TBCAS.2024.3437554","DOIUrl":"https://doi.org/10.1109/TBCAS.2024.3437554","url":null,"abstract":"","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"18 4","pages":"C3-C3"},"PeriodicalIF":0.0,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10643420","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142021656","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-21DOI: 10.1109/TBCAS.2024.3439815
{"title":"TechRxiv: Share Your Preprint Research with the World!","authors":"","doi":"10.1109/TBCAS.2024.3439815","DOIUrl":"https://doi.org/10.1109/TBCAS.2024.3439815","url":null,"abstract":"","PeriodicalId":94031,"journal":{"name":"IEEE transactions on biomedical circuits and systems","volume":"18 4","pages":"951-951"},"PeriodicalIF":0.0,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10643423","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142021664","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}