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Interactive 360° video to “Polyphenolic extracts of walnut (Juglans regia) green husk containing juglone inhibit the growth of HL-60 cells and induce apoptosis” 交互式360°视频“核桃绿壳多酚提取物(核桃胶)含有核桃胶酮抑制HL-60细胞生长和诱导凋亡”
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-05-01 DOI: 10.1016/j.ejbt.2022.04.002
Carmen Soto-Maldonado , Mauricio Vergara-Castro , John Jara-Quezada , Eduardo Caballero-Valdés , Andrea Müller-Pavez , María Elvira Zúñiga-Hansen , Claudia Altamirano

Background

Juglone is a naphthoquinone currently obtained by chemical synthesis with biological activities including antitumor activity. Additionally, juglone is present in the green husk of walnut, which suggests evaluating the effect of GH extracts on carcinogenic cell lines.

Results

Walnut green husk ethanolic extract was obtained as 169.1 mg juglone/100 g Green Husk and antioxidant activity (ORAC) of 44,920 μmol Trolox Equivalent/100 g DW Green Husk. At 1 μM juglone in HL-60 cell culture, green husk extract showed an antiproliferative effect, but pure juglone did not; under these conditions, normal fibroblast cells were not affected. A dose-dependent effect on mitochondrial membrane potential loss was observed. Apoptosis of HL-60 was detected at 10 μM juglone. Despite high ORAC values, neither purified juglone nor the extract showed protective effects on HL-60 cells under oxidative conditions.

Conclusions

Green husk extract generates an antiproliferative effect in HL-60 cells, which is related to an induction of the early stages of apoptosis and a loss of mitochondrial membrane potential. The normal cells were not affected when juglone is present at concentrations of 1 μM, while at higher concentrations, there is loss of viability of both cancerous and healthy cells.

How to cite: Soto-Maldonado C, Vergara-Castro M, Jara-Quezada J, et al. Interactive 360° video to: Polyphenolic extracts of walnut (Juglans regia) green husk containing juglone inhibit the growth of HL-60 cells and induce apoptosis. Electron J Biotechnol 2022;57. https://doi.org/10.1016/j.ejbt.2022.04.002.

核桃酮是目前通过化学合成获得的一种萘醌类化合物,具有抗肿瘤等生物活性。此外,核桃木酮存在于核桃的绿色外壳中,这表明可以评估生长激素提取物对致癌细胞系的影响。结果核桃青皮醇提物的抗氧化活性(ORAC)为44,920 μmol Trolox当量/100 g DW绿皮。在1 μM核桃胶浓度下,绿皮提取物对HL-60细胞有抗增殖作用,而纯核桃胶没有;在这些条件下,正常成纤维细胞不受影响。观察到剂量依赖性对线粒体膜电位损失的影响。10 μM juglone检测HL-60细胞凋亡。尽管ORAC值很高,但纯化核桃酚和提取物在氧化条件下对HL-60细胞都没有保护作用。结论绿皮提取物对HL-60细胞具有抗增殖作用,其机制可能与诱导HL-60细胞早期凋亡和线粒体膜电位丧失有关。当核桃酮浓度为1 μM时,正常细胞不受影响,而在更高浓度下,癌细胞和健康细胞都失去活力。如何引用:Soto-Maldonado C, Vergara-Castro M, Jara-Quezada J,等。交互式360°视频:核桃绿皮多酚提取物含核桃酚酮抑制HL-60细胞生长,诱导细胞凋亡。中国生物医学工程学报(英文版);2009;16。https://doi.org/10.1016/j.ejbt.2022.04.002。
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引用次数: 0
Interactive 360° video to “Survival of microencapsulated Lactobacillus casei (prepared by vibration technology) in fruit juice during cold storage” 交互式360°视频“微胶囊化干酪乳杆菌(振动技术制备)在冷藏果汁中的存活”
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-05-01 DOI: 10.1016/j.ejbt.2022.04.003
Araceli Olivares , Carmen Soto , Eduardo Caballero , Claudia Altamirano

Background

Foods including probiotics are considered “functional foods.” As an alternative to dairy products, we investigated the behavior of Lactobacillus casei when exposed to low-pH fruit juice. Juices of fruits such as pineapple, raspberry, and orange were assessed. Free and microencapsulated forms of L. casei were compared, and the viability of the probiotic was evaluated under storage at 4°C for 28 d. Microbiological analyses were carried out to ensure a safe and healthy product for consumers who look for foods with probiotics from sources other than dairy.

Results

Low pH affected L. casei survival during storage depending on the type of fruit juice. In the case of pineapple juice, some microcapsules were broken, but microcapsules recovered at the end of the storage period had 100% viability (2.3 × 107 CFU/g spheres). In the case of orange juice, more than 91% viability (5.5 × 106 CFU/g spheres) was found. In raspberry juice, viability decreased rapidly, disappearing at the end of the storage period, which was caused by the absorption of high concentrations of anthocyanin inside microcapsules more than low pH.

Conclusions

Low pH affected the survival of L. casei under refrigeration; even when they were microencapsulated, acidic conditions impacted their viability. Although pH affects viability, its value is very sensitive and will depend on the type of fruit juice and its composition. Some fruit juices contain compounds used as substrates for Lactobacillus and other compounds with antimicrobial effects.

How to cite: Olivares A, Soto C, Caballero E, et al. Interactive 360° video to “Survival of microencapsulated Lactobacillus casei (prepared by vibration technology) in fruit juice during cold storage”. Electron J Biotechnol 2022;57. https://doi.org/10.1016/j.ejbt.2022.04.003.

包括益生菌在内的食品被认为是“功能性食品”。作为乳制品的替代品,我们研究了干酪乳杆菌暴露于低ph果汁时的行为。对菠萝、覆盆子和橙子等水果的果汁进行了评估。对游离形式的干酪乳杆菌和微胶囊形式的干酪乳杆菌进行了比较,并对益生菌在4°C下储存28 d的活力进行了评估。进行了微生物学分析,以确保消费者从乳制品以外的来源寻找含有益生菌的食品,从而获得安全健康的产品。结果低pH值会影响干酪乳杆菌在贮藏期间的存活率,这取决于果汁的种类。以菠萝汁为例,部分微胶囊破裂,但贮藏期结束时回收的微胶囊具有100%的活力(2.3 × 107 CFU/g球)。以橙汁为例,发现存活率超过91% (5.5 × 106 CFU/g球)。在覆盆子汁中,存活率迅速下降,在贮藏期结束时消失,这是由于微胶囊内高浓度花青素的吸收大于低pH引起的。结论低pH对干酪乳杆菌冷藏后的存活有影响;即使它们被微胶囊化,酸性条件也会影响它们的生存能力。虽然pH值影响活力,但它的值是非常敏感的,取决于果汁的类型和成分。一些果汁含有作为乳酸菌底物的化合物和其他具有抗菌作用的化合物。如何引用:Olivares A, Soto C, Caballero E等。交互式360°视频“微胶囊干酪乳杆菌(振动技术制备)在冷藏期间在果汁中的存活”。中国生物医学工程学报(英文版);2009;16。https://doi.org/10.1016/j.ejbt.2022.04.003。
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引用次数: 0
Self-contained and integral microbial fuel cells as portable and sustainable energy sources for low-power field devices 自给自足的整体微生物燃料电池作为便携式和可持续能源的低功率现场设备
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-05-01 DOI: 10.1016/j.ejbt.2022.04.004
Naroa Uria-Molto , Ruben D. Costa , Cybeles Nunziata , Sara Santiago , Gonzalo Guirado , Xavier Muñoz-Berbel , Lukasz Kowalski

Background

With a smaller environmental footprint and longer operation times, Microbial Fuel Cells (MFCs) are now preferred over other renewable technologies for powering small electronic devices in the field. Although with excellent performance in the laboratory, most of MFCs fail for not considering the real field conditions. The purpose of this study is the development of a compact, portable, and self-sustaining format of energy production based on MFC technologies. For this, three MFC configurations, soil MFC, plant MFC and a hybrid-MFC, where a plant and a soil MFC are combined, are assembled in portable power devices and compared.

Results

Plant MFCs provided lower performances (maximum power of 0.6 ± 0.4 µW·cm−2) resulting from a fast and sharp decrease in the anode potential by the flowing of oxygen from the aerenchyma of the plant roots. The performance of soil MFCs was much better (maximum power of 2.0 ± 0.02 µW·cm−2), but not sustained over time (20 days) by the depletion of organic matter. The combination of a soil MFC and a plant in separate compartments of a single container results in a hybrid-MFC with a good performance (maximum power of 2.7 µW·cm−2) which sustained over time for more than 1 month.

Conclusions

Therefore, the hybrid self-containing MFCs appears as an ideal alternative for the long-term power supply of low-power field electronic devices, from meteorological sensors or LED lights.

How to cite: Uria-Molto N, Costa RD, Nunziata C, et al. Self-contained and integral microbial fuel cells as portable and sustainable energy sources for low-power field devices. Electron J Biotechnol 2022;57. https://doi.org/10.1016/j.ejbt.2022.04.004

微生物燃料电池(mfc)具有更小的环境足迹和更长的运行时间,现在比其他可再生技术更适合为小型电子设备供电。尽管mfc在实验室中具有优异的性能,但由于没有考虑到实际的现场条件,大多数mfc都失败了。本研究的目的是开发一种基于MFC技术的紧凑、便携和自我维持的能源生产形式。为此,将三种MFC配置,土壤MFC,植物MFC和混合MFC(植物和土壤MFC结合在一起)组装在便携式电源设备中并进行比较。结果植物mfc的性能较差(最大功率为0.6±0.4µW·cm−2),这是由于植物根部通气组织中氧气的流动导致阳极电位迅速急剧下降。土壤mfc的性能要好得多(最大功率为2.0±0.02µW·cm−2),但由于有机质耗竭而不能长期维持(20 d)。将土壤MFC和植物分别放在一个容器的不同隔间中,形成了性能良好的混合MFC(最大功率为2.7 μ W·cm−2),持续时间超过1个月。因此,混合自含mfc似乎是低功耗现场电子设备(如气象传感器或LED灯)长期供电的理想选择。引用方式:Uria-Molto N, Costa RD, Nunziata C等。自给自足的整体微生物燃料电池作为便携式和可持续能源的低功率现场设备。中国生物医学工程学报(英文版);2009;16。https://doi.org/10.1016/j.ejbt.2022.04.004
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引用次数: 6
Effects of Agaricus blazei acidic polysaccharide on the aging of mice through keap1-Nrf2/ARE and MAPKs signal pathway 姬松茸酸性多糖通过keap1-Nrf2/ARE和MAPKs信号通路对小鼠衰老的影响
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-05-01 DOI: 10.1016/j.ejbt.2022.03.004
Xiao Guo , Yujie Ye , Xinzhu Liu , Yu Sheng , Ying Yu , Yingying Yang , Mingliu Gu , Rui Lin , Baohui Wang , Liping An , Xuechun Lu

Background

In view of the increasing human life and the aging of the population, the search for safe anti-aging drugs has become a hot topic. Agaricus blazei Murrill is a rare edible fungus, with a variety of biological activities. The purpose of this study was to clarify the anti-aging effect and mechanism of ABM-A on the aging induced by D-Galactose in mice.

Results

The result showed that ABM-A contained 87.2% of glucose, 3.3% of galactose, 3.8% mannose and 5.7% gluconic acid. The behavior of mice in the treatment group was significantly improved after administration of ABM-A. And the activity of SOD and CAT and the level of T-AOC were increased (p < 0.05), the content of MDA and ROS was decreased (p < 0.05) in the serum of mice in ABM-A group. The results of mechanism research showed that nine genes were screened out by functional annotation and enrichment analysis for the verification by RT-qPCR, and the results of RT-qPCR were consistent with those of RNA-seq. Western Blot results showed that ABM-A upregulated the expression of Hmox1, Myd88, p-c-Jun, Apc, Bmil, Cox7a2l and Ndufv1, down-regulated the expression of Nfe2l2, Keap1, Apoe, Mapk1and Atp1a3, and decreased the phosphorylation of p38 and Jnk, suggesting that it may play an anti-aging effect by regulating Nrf2/ARE and MAPKs superfamily signal pathways.

Conclusions

ABM-A can reduce oxidation reaction and play an anti-aging role through Keap1-Nrf2/ARE and MAPKs signaling pathway.

How to cite: Guo, X, Ye Y, Liu X, et al. Effects of Agaricus blazei acidic polysaccharide on the aging of mice through keap1-Nrf2/ARE and MAPKs signal pathway. Electron J Biotechnol 2022;57. https://doi.org/10.1016/j.ejbt.2022.03.004

随着人类寿命的延长和人口的老龄化,寻找安全的抗衰老药物已成为一个热门话题。姬松茸(Agaricus blazei Murrill)是一种稀有食用菌,具有多种生物活性。本研究旨在阐明ABM-A对d -半乳糖致小鼠衰老的抗衰老作用及其机制。结果ABM-A中葡萄糖含量为87.2%,半乳糖含量为3.3%,甘露糖含量为3.8%,葡萄糖酸含量为5.7%。治疗组小鼠给药后行为学有明显改善。SOD、CAT活性升高,T-AOC水平升高(p <0.05), MDA和ROS含量降低(p <0.05)。机制研究结果显示,通过功能注释和富集分析筛选出9个基因进行RT-qPCR验证,RT-qPCR结果与RNA-seq结果一致。Western Blot结果显示,ABM-A上调Hmox1、Myd88、p-c-Jun、Apc、bil、Cox7a2l和Ndufv1的表达,下调Nfe2l2、Keap1、Apoe、mapk1和Atp1a3的表达,降低p38和Jnk的磷酸化,提示其可能通过调节Nrf2/ARE和MAPKs超家族信号通路发挥抗衰老作用。结论sabm -a可通过Keap1-Nrf2/ARE和MAPKs信号通路抑制氧化反应,发挥抗衰老作用。引用方式:郭,X,叶艳,刘鑫,等。姬松茸酸性多糖通过keap1-Nrf2/ARE和MAPKs信号通路对小鼠衰老的影响。中国生物医学工程学报(英文版);2009;16。https://doi.org/10.1016/j.ejbt.2022.03.004
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引用次数: 3
Production and optimization of polyhydroxyalkanoates (PHAs) from Paraburkholderia sp. PFN 29 under submerged fermentation Paraburkholderia sp. pfn29深层发酵生产聚羟基烷烃酸酯(PHAs)及优化
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-03-01 DOI: 10.1016/j.ejbt.2021.12.003
Thayat Sriyapai , Thitima Chuarung , Kazuhide Kimbara , Siritron Samosorn , Pichapak Sriyapai

Background

Polyhydroxybutyrate (PHB) and polyhydroxybutyrate-co-hydroxyvalerate (PHBV) are the most common polyhydroxyalkanoates (PHAs). They are important candidates for biodegradable plastics that accumulate in the cytoplasm in the form of intracellular granules under unbalanced growth conditions. The present study focused on the production and optimization of PHAs from Paraburkholderia sp. PFN29 for the first time under submerged fermentation.

Results

Two hundred bacterial isolates were collected from soil samples in Thailand, six of which were found to accumulate PHB using the Nile red staining method. Six isolates were identified by 16S rDNA gene sequencing and were shown to be closely related to the genera Azotobacter, Sphingobium and Paraburkholderia. The best strain, Paraburkholderia sp. PFN29, showed the highest PHB concentration (5 ± 0.17 g/L). Optimization of PHB accumulation was achieved in modified medium containing 3% (w/v) glucose, and 0.1% (w/v) (NH4)2Fe(SO4) with incubation at pH 7.0 and 35°C for 96 h with shaking at 200 rpm. In preliminary PHBV synthesis, PFN29 was utilized to synthesize PHBV from glucose and organic acids (levulinic acid and propionic acid). 1H nuclear magnetic resonance (1H NMR) spectroscopy and gas chromatography-mass spectrometry (GC/MS) analyses confirmed the extracted PHAs compared to standard PHB and PHBV.

Conclusions

PFN29 can be used for feasible PHB production with a PHB content of up to 97.3% of 5.14 ± 0.17 g/L CDW. The PHBV concentration can be further improved by optimizing the production parameters as cosubstrates. The present study provides useful data on PHA production by Paraburkholderia, which may be used as a candidate species for commercial PHA production.

How to cite

Sriyapai T, Chuarung T, Kimbara K, et al. Production and optimization of polyhydroxyalkanoates (PHAs) from Paraburkholderia sp. PFN 29 under submerged fermentation. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2021.12.003

聚羟基丁酸酯(PHB)和聚羟基丁酸酯-羟基戊酸酯(PHBV)是最常见的聚羟基烷酸酯(PHAs)。它们是在不平衡生长条件下以细胞内颗粒形式积聚在细胞质中的可生物降解塑料的重要候选者。本研究首次对Paraburkholderia sp. PFN29进行了深层发酵生产pha的研究。结果从泰国土壤样品中分离到200株细菌,其中6株细菌采用尼罗红染色法富集PHB。经16S rDNA基因测序鉴定,6株分离菌株与固氮菌属、Sphingobium属和Paraburkholderia属亲缘关系较近。PHB浓度最高的菌株为Paraburkholderia sp. PFN29(5±0.17 g/L)。在含有3% (w/v)葡萄糖和0.1% (w/v) (NH4)2Fe(SO4)的改性培养基中,在pH 7.0、35℃、200 rpm下振荡96 h,获得了PHB积累的最佳条件。在PHBV的初步合成中,利用PFN29从葡萄糖和有机酸(乙酰丙酸和丙酸)合成PHBV。1H核磁共振(1H NMR)光谱和气相色谱-质谱(GC/MS)分析证实了提取的相has与标准PHB和PHBV的比较。结论在5.14±0.17 g/L CDW条件下,spfn29可制备PHB, PHB含量可达97.3%。通过优化生产工艺,可以进一步提高PHBV的浓度。本研究为拟aburkholderia生产PHA提供了有用的数据,它可能被用作商业生产PHA的候选物种。如何引用esriyapai T, Chuarung T, Kimbara K等。Paraburkholderia sp. pfn29深层发酵生产聚羟基烷烃酸酯(PHAs)及优化中国生物医学工程学报(英文版);2012;https://doi.org/10.1016/j.ejbt.2021.12.003
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引用次数: 12
Study of native SMAC protein production in the pUbiq expression system: Molecular cloning, biosynthesis and molecular modelling pUbiq表达系统中天然SMAC蛋白生产的研究:分子克隆、生物合成和分子建模
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-03-01 DOI: 10.1016/j.ejbt.2022.01.002
Pál Salamon , Csongor K. Orbán , Katalin Molnár-Nagy , Zita Kovács , Klára Váncsa , Emese Bálint , Ildikó Miklóssy , Beáta Albert , Gyöngyi Tar , Szabolcs Lányi

Background

In the process of recombinant protein biosynthesis affinity tags are efficient tools to achieve the expected purity and yield during the purification steps. Nonetheless these tags might alter enzyme specificity and activity, therefore in functional assays it is recommended to use authentic or native proteins. Several ubiquitin fusion systems have been developed for E. coli-based recombinant protein expression that provide high levels of expression, with simple purification, and allow the production of various proteins with authentic N-terminus for subsequent applications.

Results

In the present research, we describe an ubiquitin fused bacterial biosynthetic system (pUbiq) for the production of the native Second mitochondria-derived activator of caspases (SMAC) recombinant protein. Using this system, the recombinant protein is expressed with an ubiquitin-decahistidine fusion partner, then purified from the cell-forming proteins by affinity chromatography. The fusion partner is then removed by proteolytic digestion, resulting the native structure of the recombinant protein without unnecessary amino acid residues. Following proteolysis, another affinity chromatography method is used to separate the native protein from the fusion partner and the proteolytic enzyme. The folding of the protein of interest was verified by a pull-down assay.

Conclusions

Based on our results, the presented pUbiq system was successfully applied in the production of native SMAC recombinant protein, where the affinity tag required for purification was completely removed. Our study suggests that the ubiquitin-fusion technology will be useful for enhancing expression and purification of native and authentic proteins for structural and functional studies as well as for therapeutic uses.

How to cite: Salamona P, Orbána CK, Molnár-Nagy K, et al. Exon based amplified polymorphism (EBAP): A novel and universal molecular marker for plants. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2022.01.002.

在重组蛋白的生物合成过程中,亲和标签是在纯化步骤中达到预期纯度和产量的有效工具。尽管如此,这些标签可能会改变酶的特异性和活性,因此在功能分析中建议使用真实的或天然的蛋白质。已经开发了几种泛素融合系统,用于大肠杆菌重组蛋白的表达,这些系统提供了高水平的表达,纯化简单,并允许生产具有真实n端的各种蛋白以供后续应用。结果在本研究中,我们描述了一个泛素融合细菌生物合成系统(pUbiq),用于生产天然的第二线粒体衍生的半胱天冬酶激活因子(SMAC)重组蛋白。利用该系统,重组蛋白与泛素-十组氨酸融合伙伴表达,然后通过亲和层析从细胞形成蛋白中纯化。然后通过蛋白水解消化去除融合伙伴,得到重组蛋白的天然结构,没有不必要的氨基酸残基。在蛋白水解之后,使用另一种亲和层析方法将天然蛋白与融合伙伴和蛋白水解酶分离。通过下拉试验验证了感兴趣的蛋白质的折叠。结论pUbiq系统完全去除纯化所需的亲和标签,成功地应用于SMAC天然重组蛋白的制备。我们的研究表明,泛素融合技术将有助于提高天然和真实蛋白的表达和纯化,用于结构和功能研究以及治疗用途。引用方式:Salamona P, Orbána CK, Molnár-Nagy K等。基于外显子的扩增多态性(EBAP):一种新的植物通用分子标记。中国生物医学工程学报(英文版);2012;https://doi.org/10.1016/j.ejbt.2022.01.002。
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引用次数: 0
Kinetics of ABE fermentation considering the different phenotypes present in a batch culture of Clostridium beijerinckii NCIMB-8052 考虑不同表型的贝氏梭菌NCIMB-8052分批培养ABE发酵动力学
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-03-01 DOI: 10.1016/j.ejbt.2021.12.002
Iván Paredes, Julián Quintero , Karlo Guerrero, Roberto Gallardo , Silvia Mau, Raúl Conejeros, Juan Carlos Gentina, German Aroca

Background

In solvent-producing Clostridium species, several physiological conditions and morphological forms can be observed during batch ABE fermentation. Currently, the contribution made by each condition or form to the production of acids and solvents is not clear. Flow cytometry and fluorescence microscopy have been used to analyze the presence of different morphological and physiological conditions for Clostridium species; however, there are few studies to quantify their contribution to fermentation kinetics.

Results

Morphological changes of the batch cultures of Clostridium beijerinckii NCIMB-8052 were followed by flow cytometry and epifluorescence microscopy. Three cell types were identified, and the percentage of each one was estimated along the culture, showing that they are present throughout the culture and its population distribution was in agreement with the kinetics of growth and acids and solvents production. Yields for the global population and for each subpopulation were estimated. The values of the yield for butanol and acetone based on the fraction of solventogenic cells were 2.5 times the values of the parameters obtained for the whole biomass, while those for acetic and butyric acids based on the acidogenic cell type was 1.5 times.

Conclusions

Quantitative analysis of the subpopulations by flow cytometry allows the calculation of the yields related to specific cell types, isolating the contribution of each subpopulation to the production of acids and solvents.

How to cite: Paredes I, Quintero J, Guerrero K, et al. Kinetics of ABE fermentation considering the different phenotypes present in a batch culture of Clostridium beijerinckii NCIMB-8052. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2021.12.002

在产溶剂梭状芽孢杆菌中,分批发酵可以观察到几种生理条件和形态形式。目前,每种条件或形式对酸和溶剂的生产所起的作用尚不清楚。利用流式细胞术和荧光显微镜分析了梭状芽孢杆菌在不同形态和生理条件下的存在;然而,很少有研究量化它们对发酵动力学的贡献。结果用流式细胞术和荧光显微镜观察贝氏梭菌NCIMB-8052批量培养后的形态学变化。鉴定了三种细胞类型,并沿培养物估计了每种细胞的百分比,表明它们存在于整个培养物中,其种群分布与生长动力学和酸和溶剂生产一致。估计了全球种群和每个亚种群的产量。丁醇和丙酮的产率是全生物量产率的2.5倍,乙酸和丁酸的产率是产酸细胞类型的1.5倍。结论通过流式细胞术对亚群进行定量分析,可以计算出与特定细胞类型相关的产量,分离出每个亚群对酸和溶剂生产的贡献。如何引用:Paredes I, Quintero J, Guerrero K,等。考虑不同表型的贝氏梭菌NCIMB-8052分批培养ABE发酵动力学中国生物医学工程学报(英文版);2012;https://doi.org/10.1016/j.ejbt.2021.12.002
{"title":"Kinetics of ABE fermentation considering the different phenotypes present in a batch culture of Clostridium beijerinckii NCIMB-8052","authors":"Iván Paredes,&nbsp;Julián Quintero ,&nbsp;Karlo Guerrero,&nbsp;Roberto Gallardo ,&nbsp;Silvia Mau,&nbsp;Raúl Conejeros,&nbsp;Juan Carlos Gentina,&nbsp;German Aroca","doi":"10.1016/j.ejbt.2021.12.002","DOIUrl":"10.1016/j.ejbt.2021.12.002","url":null,"abstract":"<div><h3>Background</h3><p>In solvent-producing <em>Clostridium</em> species, several physiological conditions and morphological forms can be observed during batch ABE fermentation. Currently, the contribution made by each condition or form to the production of acids and solvents is not clear. Flow cytometry and fluorescence microscopy have been used to analyze the presence of different morphological and physiological conditions for <em>Clostridium</em> species; however, there are few studies to quantify their contribution to fermentation kinetics.</p></div><div><h3>Results</h3><p>Morphological changes of the batch cultures of <em>Clostridium beijerinckii</em> NCIMB-8052 were followed by flow cytometry and epifluorescence microscopy. Three cell types were identified, and the percentage of each one was estimated along the culture, showing that they are present throughout the culture and its population distribution was in agreement with the kinetics of growth and acids and solvents production. Yields for the global population and for each subpopulation were estimated. The values of the yield for butanol and acetone based on the fraction of solventogenic cells were 2.5 times the values of the parameters obtained for the whole biomass, while those for acetic and butyric acids based on the acidogenic cell type was 1.5 times.</p></div><div><h3>Conclusions</h3><p>Quantitative analysis of the subpopulations by flow cytometry allows the calculation of the yields related to specific cell types, isolating the contribution of each subpopulation to the production of acids and solvents.</p><p><strong>How to cite</strong>: Paredes I, Quintero J, Guerrero K, et al. Kinetics of ABE fermentation considering the different phenotypes present in a batch culture of <em>Clostridium beijerinckii</em> NCIMB-8052. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2021.12.002</p></div>","PeriodicalId":11529,"journal":{"name":"Electronic Journal of Biotechnology","volume":"56 ","pages":"Pages 12-21"},"PeriodicalIF":2.7,"publicationDate":"2022-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0717345821000580/pdfft?md5=b9f570ac0cd54424a192c4e41f6277a5&pid=1-s2.0-S0717345821000580-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48884854","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Antioxidant and antimicrobial capacity of Maytenus boaria leaves, recovery by infusion and solvent extraction 马尾草叶的抗氧化和抑菌能力,浸提和溶剂萃取回收
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-03-01 DOI: 10.1016/j.ejbt.2022.02.002
Carmen Soto-Maldonado , Benjamín Fernández-Araya , Vicente Saavedra-Sánchez , Julissa Santis-Bernal , Lisette Alcaíno-Fuentes , Alejandra Arancibia-Díaz , María Elvira Zúñiga-Hansen

Background

Infusions of Maiten (Maytenus boaria) leaves are used in folk medicine as an antipyretic and for skin allergic rash treatment. Antioxidant, antipyretic and anti-inflammatory properties of medicinal plants have been attributed to phenolic compounds presence. This work, the first in this type, reports the presence of total phenolic compounds (TPC), total flavonoids (TFC), and the antioxidant activity by DPPH, FRAP and ORAC methods of extracts of maiten leaves, including an infusion; also, antimicrobial activity on Gram + and Gram − bacteria were determined. In addition, the presence of Quercetin and catalase were determined, and the FTIR spectrum was done.

Results

The best values of TPC and TFC were 20.55 gGAE/kgleaves, and 23.69 gQE/kgleaves, respectively, in an ethanolic extract. Best antioxidant activities were obtained in a methanolic extract for DPPH, aqueous extract for FRAP. No significant differences were observed in ORAC activity determination of aqueous, ethanolic, and methanolic extracts and a maiten infusion, with an average value of 22.41 mmolTE/kgleaves. In the case of antimicrobial activity, extract of maiten leaves can inhibit the growth of bacteria as Escherichia coli and Listeria monocytogenes, among others.

Conclusions

M. boaria leaves are an important source of phenolics compounds with antioxidant activity; these properties are observed in extracts and infusions. In addition, the extract of maiten leaves produces the inhibition of pathogens Gram+ and Gram− bacteria, showing the great therapeutic potential of this plant used in folk medicine.

How to cite: Soto-Maldonado C, Fernández-Araya B, Saavedra-Sánchez V. Antioxidant and antimicrobial capacity of Maytenus boaria leaves, recovery by infusion and solvent extraction. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2022.02.002.

在民间医学中,猪头藤(Maytenus boaria)叶子被用作退烧药和皮肤过敏性皮疹的治疗。药用植物的抗氧化、解热和抗炎特性都归因于酚类化合物的存在。本研究首次采用DPPH法、FRAP法和ORAC法研究了毛竹叶提取物(包括浸提液)中总酚类化合物(TPC)、总黄酮(TFC)的存在及其抗氧化活性;同时测定了对革兰氏+和革兰氏−菌的抑菌活性。测定了槲皮素和过氧化氢酶的存在,并进行了红外光谱分析。结果乙醇提取物中TPC和TFC的最佳值分别为20.55 gQE/kg叶和23.69 gQE/kg叶。DPPH醇提物和FRAP水提物的抗氧化活性最佳。水溶液提取液、乙醇提取液、甲醇提取液和灌胃液的ORAC活性测定无显著差异,平均值为22.41 mmol /kg叶。在抑菌活性方面,竹叶提取物对大肠杆菌、单核增生李斯特菌等细菌的生长有抑制作用。Boaria叶是具有抗氧化活性的酚类化合物的重要来源;这些特性在提取物和浸剂中都可以观察到。此外,藤叶提取物对病原菌革兰氏+和革兰氏−细菌具有抑制作用,显示了其在民间医学中的巨大治疗潜力。如何引用:Soto-Maldonado C, Fernández-Araya B, Saavedra-Sánchez V.猪叶的抗氧化和抗菌能力,浸提和溶剂提取的回收率。中国生物医学工程学报(英文版);2012;https://doi.org/10.1016/j.ejbt.2022.02.002。
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引用次数: 0
Antimicrobial characterization of a titanium coating derived from mussel-glue and Bothrops asper snake venom for the prevention of implant-associated infections caused by Staphylococcus 从贻贝胶和Bothrops asper蛇毒中提取的钛涂层的抗菌特性,用于预防葡萄球菌引起的种植体相关感染
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-03-01 DOI: 10.1016/j.ejbt.2022.02.001
Adriana Gauna , Luis Mercado , Fanny Guzmán

Background

Proliferation of bacteria, such as Staphylococcus aureus and Staphylococcus epidermidis, on orthopedic implants has been a challenge in orthopedic surgery, highlighting the problem of the increasing antibiotic resistance and the necessity to develop new antimicrobial agents. In this sense, antimicrobial peptides are promising candidates, which can be attached to titanium surfaces in order to make them safer. Mytilus mussels are characterized by adhering efficiently to a wide variety of surfaces, especially metallic ones, through adhesive proteins with a high content of dihydroxyphenylalanine, which is a post-translational modification of tyrosine.

Results

This work refers to the synthesis of a coating based on a bifunctional peptide that combines a sequence derived from the mussel foot protein-5 and the antimicrobial peptide pEM-2, derived from Bothrops asper snake venom. The adhesive properties of this bifunctional peptide were evaluated, as well as the adhesive sequence without the pEM-2, using a Quartz Crystal Microbalance. The results showed that the presence of the antimicrobial peptide improved the adhesion; however, a loss of the bactericidal activity was observed. Even so, the adhesive sequence by itself exhibited an important antifouling activity, preventing S. aureus and S. epidermidis adhesion to titanium by 75% and 45%, respectively, although the result against S. epidermidis was not significant.

Conclusions

A 13-residue peptide derived from a natural and biocompatible source, like a Mytilus mussel adhesive protein, could be projected as a protective agent on titanium surfaces against S. aureus and S. epidermidis, being responsible for two thirds of the cases of orthopedic implant infection.

How to cite: Gauna A, Mercado L, Guzmán F. Antimicrobial characterization of a titanium coating derived from mussel-glue and Bothrops asper snake venom for the prevention of implant-associated infections caused by Staphylococcus. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2022.02.001.

在骨科手术中,金黄色葡萄球菌和表皮葡萄球菌等细菌在植入物上的增殖一直是一个挑战,这突出了抗生素耐药性日益增加的问题和开发新的抗菌药物的必要性。从这个意义上说,抗菌肽是很有希望的候选者,它可以附着在钛表面,以使其更安全。贻贝的特点是通过含有高含量的二羟基苯丙氨酸(酪氨酸的翻译后修饰)的粘附蛋白,有效地粘附在各种表面上,特别是金属表面。结果将贻贝足蛋白-5和Bothrops asper蛇毒抗菌肽pEM-2结合,合成了一种基于双功能肽的涂层。利用石英晶体微天平对该双功能肽的粘附性能进行了评价,并对不含pEM-2的粘附序列进行了评价。结果表明,抗菌肽的存在提高了粘附力;然而,观察到杀菌活性的丧失。尽管如此,粘附序列本身表现出了重要的防污活性,虽然对表皮葡萄球菌的效果不显著,但对金黄色葡萄球菌和表皮葡萄球菌的粘附率分别为75%和45%。结论一种具有天然生物相容性的13残基肽,如贻贝粘附蛋白,可作为钛表面的保护剂,对金黄色葡萄球菌和表皮葡萄球菌起保护作用,三分之二的骨科植入物感染是由这种蛋白引起的。Gauna A, Mercado L, Guzmán F.贻贝胶和Bothrops asper蛇毒制备的钛涂层对葡萄球菌引起的种植体相关感染的抗菌性能研究。中国生物医学工程学报(英文版);2012;https://doi.org/10.1016/j.ejbt.2022.02.001。
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引用次数: 1
GbpA as a secretion and affinity purification tag for an antimicrobial peptide produced in Vibrio natriegens GbpA作为产自营养弧菌的抗菌肽的分泌和亲和纯化标签
IF 2.7 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2022-03-01 DOI: 10.1016/j.ejbt.2022.01.003
Stefan Schwarz , Doreen Gerlach , Rong Fan , Peter Czermak

Background

Vibrio natriegens is a Gram-negative bacterium that offers a greater metabolic capacity than Escherichia coli for the production of recombinant proteins. This potential includes a low minimum doubling time of 7 min and a high maximum glucose uptake rate of 3.9 g*g−1*h−1. We therefore tested the ability of V. natriegens to produce the insect metalloprotease inhibitor (IMPI), an antimicrobial peptide, fused to the glucosamine-binding protein A (GbpA) secretion/purification tag, using the Vmax Express system.

Results

The IMPI-GbpA fusion protein was secreted into the medium and could be purified directly from the fermentation supernatant by affinity chromatography, including on-column digestion with thrombin. We also modified the GbpA tag by deleting the second and third domains, which reduced the size of the tag while maintaining its functionality. This modification also increased the IMPI yield.

Conclusions

The use of V. natriegens as an expression platform and GbpA for protein secretion and purification facilitates the inexpensive production of antimicrobial peptides. Our process achieved a higher volumetric yield than earlier attempts to produce recombinant IMPI in E. coli. However, the accumulation of IMPI causes V. natriegens growth arrest before the carbon source is depleted, suggesting it may be possible to achieve even greater productivity by further process optimization.

How to cite: Schwarz S, Gerlach D, Fan R, et al. GbpA as a secretion and affinity purification tag for an antimicrobial peptide produced in Vibrio natriegens. Electron J Biotechnol 2022;56. https://doi.org/10.1016/j.ejbt.2022.01.003.

产氮弧菌是一种革兰氏阴性菌,在生产重组蛋白方面比大肠杆菌具有更大的代谢能力。这种潜能包括7分钟的最小加倍时间和3.9 g*g - 1*h - 1的最高葡萄糖摄取速率。因此,我们使用Vmax Express系统测试了V. natriegens产生昆虫金属蛋白酶抑制剂(IMPI)的能力,这是一种与氨基结合蛋白A (GbpA)分泌/纯化标签融合的抗菌肽。结果IMPI-GbpA融合蛋白被分泌到培养基中,通过亲和层析直接从发酵上清中纯化,包括柱上酶切。我们还通过删除第二和第三个域来修改GbpA标记,这在保持其功能的同时减小了标记的大小。这种改进也提高了IMPI产率。结论利用V. natriegens作为表达平台,利用GbpA进行蛋白分泌和纯化,可实现抗菌肽的廉价生产。我们的工艺比早期在大肠杆菌中生产重组IMPI的尝试获得了更高的体积产率。然而,在碳源耗尽之前,IMPI的积累会导致氮源弧菌的生长停滞,这表明通过进一步的工艺优化有可能实现更高的生产率。引用方式:Schwarz S, Gerlach D, Fan R,等。GbpA作为产自营养弧菌的抗菌肽的分泌和亲和纯化标签。中国生物医学工程学报(英文版);2012;https://doi.org/10.1016/j.ejbt.2022.01.003。
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引用次数: 3
期刊
Electronic Journal of Biotechnology
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