首页 > 最新文献

European Journal of Soil Biology最新文献

英文 中文
Warmer summers have the potential to affect food security by increasing the prevalence and activity of Actinobacteria 温暖的夏季有可能通过增加放线菌的流行和活性来影响粮食安全
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2024-12-31 DOI: 10.1016/j.ejsobi.2024.103708
Yuanyuan Bao , Jan Dolfing , Zhiying Guo , Jie Liu , Xianzhang Pan , Xiaodan Cui , Yuanyuan Wang , Yang Jin , Lixia Zhang , Ruirui Chen , Xin Li , Youzhi Feng
Climate warming impacts agricultural ecosystems in an unpredictable manner. Below-ground microbes are pivotal for aboveground productivity, but their influences on crop productivity in a warming climate are unknown. We conducted a regional-scale field survey in 253 rice‒wheat rotation systems using bacterial 16S amplicon sequencing and satellite-derived crop net primary productivity (NPP) data to investigate the relationships between soil bacteria and crop NPP under different temperatures. Actinobacteria were identified as the main driver of crop NPP, accounting for 4.2 % of the variation, with summer warming accounting for 11.9 % of the increase in their relative abundance. Summer warming resulted in an increase in antibiotic production genes within Actinobacteria, potentially reducing crop productivity by inhibiting seed germination and root elongation and by suppressing plant growth-promoting microorganisms. Taken together, our study indicates that warmer summers are expected to increase the relative abundance of soil Actinobacteria in rice-wheat rotation systems, which will negatively impact crop NPP due to their production of antibiotics that suppress beneficial plant microbes and/or inhibit crop seed germination and root elongation.
气候变暖以不可预测的方式影响农业生态系统。地下微生物对地上生产力至关重要,但它们在气候变暖的情况下对作物生产力的影响尚不清楚。利用细菌16S扩增子测序和卫星获取的作物净初级生产力(NPP)数据,对253个水稻-小麦轮作系统进行了区域尺度的实地调查,探讨了不同温度下土壤细菌与作物净初级生产力(NPP)的关系。放线菌是作物NPP的主要驱动因子,占变化量的4.2%,其中夏季变暖占放线菌相对丰度增加的11.9%。夏季变暖导致放线菌内抗生素生产基因的增加,可能通过抑制种子发芽和根伸长以及抑制植物生长促进微生物来降低作物产量。综上所述,我们的研究表明,温暖的夏季预计会增加稻麦轮作系统中土壤放线菌的相对丰度,这将对作物NPP产生负面影响,因为它们产生的抗生素会抑制有益植物微生物和/或抑制作物种子发芽和根系伸长。
{"title":"Warmer summers have the potential to affect food security by increasing the prevalence and activity of Actinobacteria","authors":"Yuanyuan Bao ,&nbsp;Jan Dolfing ,&nbsp;Zhiying Guo ,&nbsp;Jie Liu ,&nbsp;Xianzhang Pan ,&nbsp;Xiaodan Cui ,&nbsp;Yuanyuan Wang ,&nbsp;Yang Jin ,&nbsp;Lixia Zhang ,&nbsp;Ruirui Chen ,&nbsp;Xin Li ,&nbsp;Youzhi Feng","doi":"10.1016/j.ejsobi.2024.103708","DOIUrl":"10.1016/j.ejsobi.2024.103708","url":null,"abstract":"<div><div>Climate warming impacts agricultural ecosystems in an unpredictable manner. Below-ground microbes are pivotal for aboveground productivity, but their influences on crop productivity in a warming climate are unknown. We conducted a regional-scale field survey in 253 rice‒wheat rotation systems using bacterial 16S amplicon sequencing and satellite-derived crop net primary productivity (NPP) data to investigate the relationships between soil bacteria and crop NPP under different temperatures. <em>Actinobacteria</em> were identified as the main driver of crop NPP, accounting for 4.2 % of the variation, with summer warming accounting for 11.9 % of the increase in their relative abundance. Summer warming resulted in an increase in antibiotic production genes within <em>Actinobacteria</em>, potentially reducing crop productivity by inhibiting seed germination and root elongation and by suppressing plant growth-promoting microorganisms. Taken together, our study indicates that warmer summers are expected to increase the relative abundance of soil <em>Actinobacteria</em> in rice-wheat rotation systems, which will negatively impact crop NPP due to their production of antibiotics that suppress beneficial plant microbes and/or inhibit crop seed germination and root elongation.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103708"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143153808","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Soil phosphorus dynamics and its correlation with ectomycorrhizal fungi following forest conversion in subtropical conifer (Picea asperata) forests 亚热带针叶林森林转换后土壤磷动态及其与外生菌根真菌的关系
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2025-01-27 DOI: 10.1016/j.ejsobi.2025.103712
Lixia Wang , Shiyu Song , Huichao Li , Yang Liu , Lin Xu , Han Li , Chengming You , Sining Liu , Hongwei Xu , Bo Tan , Zhenfeng Xu , Li Zhang , Hans Lambers , Douglas Godbold
Ectomycorrhizal (ECM) fungi or their associated microbes play key roles in mobilizing phosphorus (P) from soil organic matter. Forest conversion often alters soil P availability. However, the correlation between P dynamics caused by forest conversion and changes in ECM fungi is not clear. To dress this issue, we create ECM-reduction (trenched) and ECM-intact (untrenched) conditions in the natural forest and plantation. We then measured soil microbial properties, fungal communities, and P fractions. Our results showed that the natural forest exhibited a higher proportion of inorganic phosphorus (Pi) and a lower proportion of organic phosphorus (Po) compared to the plantation, indicating that forest conversion resulted in a decrease in P mineralization. Under ECM-reduction conditions, resin-Pi contents increased in both forest types. ECM-reduction led to an increase in NaOH-Pi and a decrease in NaOH-Po in both forest types. However, ECM-reduction decreased the 1 M HCl-Pi content in the natural forest while increasing it in the plantation. Structural equation modeling revealed that in the natural forest, trenching directly affected the reads number of ECM fungi, which subsequently influenced 1 M HCl-Pi and resin-Pi contents. In the plantation, trenching impacted NaOH-Po and ECM reads number, which were associated with changes in residual-P and resin-Pi contents. These findings highlight that ECM fungi differ in their utilization of resin-Pi and their ability to mobilize primary mineral Pi (1 M HCl-Pi) and poorly-available P, depending on the soil quality of natural forests and plantations.
外生菌根真菌(ECM)及其伴生微生物在从土壤有机质中调动磷(P)中起着关键作用。森林转化经常改变土壤磷的有效性。然而,森林转换引起的磷动态与ECM真菌变化之间的相关性尚不清楚。为了解决这个问题,我们在天然林和人工林中创造了ecm减少(沟槽)和ecm完整(未沟槽)的条件。然后我们测量了土壤微生物特性、真菌群落和磷组分。结果表明,与人工林相比,天然林土壤中无机磷(Pi)含量较高,有机磷(Po)含量较低,表明森林转化导致土壤中磷矿化程度降低。在ecm减少条件下,两种林型的树脂- pi含量均增加。ecm减少导致两种林型NaOH-Pi增加,NaOH-Po减少。ecm的减少使天然林的HCl-Pi含量降低了1 M,而人工林的HCl-Pi含量则增加了1 M。结构方程模型表明,在天然林中,挖沟直接影响ECM真菌的reads数,进而影响1 M HCl-Pi和resin-Pi的含量。在人工林中,沟槽对NaOH-Po和ECM读数有影响,其变化与剩余磷和树脂pi含量的变化有关。这些发现突出表明,ECM真菌对树脂-磷的利用以及动员初级矿物磷(1 M HCl-Pi)和缺乏有效磷的能力因天然林和人工林的土壤质量而异。
{"title":"Soil phosphorus dynamics and its correlation with ectomycorrhizal fungi following forest conversion in subtropical conifer (Picea asperata) forests","authors":"Lixia Wang ,&nbsp;Shiyu Song ,&nbsp;Huichao Li ,&nbsp;Yang Liu ,&nbsp;Lin Xu ,&nbsp;Han Li ,&nbsp;Chengming You ,&nbsp;Sining Liu ,&nbsp;Hongwei Xu ,&nbsp;Bo Tan ,&nbsp;Zhenfeng Xu ,&nbsp;Li Zhang ,&nbsp;Hans Lambers ,&nbsp;Douglas Godbold","doi":"10.1016/j.ejsobi.2025.103712","DOIUrl":"10.1016/j.ejsobi.2025.103712","url":null,"abstract":"<div><div>Ectomycorrhizal (ECM) fungi or their associated microbes play key roles in mobilizing phosphorus (P) from soil organic matter. Forest conversion often alters soil P availability. However, the correlation between P dynamics caused by forest conversion and changes in ECM fungi is not clear. To dress this issue, we create ECM-reduction (trenched) and ECM-intact (untrenched) conditions in the natural forest and plantation. We then measured soil microbial properties, fungal communities, and P fractions. Our results showed that the natural forest exhibited a higher proportion of inorganic phosphorus (Pi) and a lower proportion of organic phosphorus (Po) compared to the plantation, indicating that forest conversion resulted in a decrease in P mineralization. Under ECM-reduction conditions, resin-Pi contents increased in both forest types. ECM-reduction led to an increase in NaOH-Pi and a decrease in NaOH-Po in both forest types. However, ECM-reduction decreased the 1 M HCl-Pi content in the natural forest while increasing it in the plantation. Structural equation modeling revealed that in the natural forest, trenching directly affected the reads number of ECM fungi, which subsequently influenced 1 M HCl-Pi and resin-Pi contents. In the plantation, trenching impacted NaOH-Po and ECM reads number, which were associated with changes in residual-P and resin-Pi contents. These findings highlight that ECM fungi differ in their utilization of resin-Pi and their ability to mobilize primary mineral Pi (1 M HCl-Pi) and poorly-available P, depending on the soil quality of natural forests and plantations.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103712"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143153810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of nitrogen addition and seasonal changes on moss biocrust soil fungal communities in a temperate desert 加氮和季节变化对温带荒漠苔藓生物结皮土壤真菌群落的影响
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2024-12-07 DOI: 10.1016/j.ejsobi.2024.103703
Tingwen Huang , Xi-En Long , Weiguo Liu
Many studies have reported that changes in nitrogen (N) deposition affect the structure and diversity of fungal communities in moss crust soils, but few studies have addressed the seasonal patterns of soil fungal community response to N inputs in desert habitats. Therefore, we conducted a one-time field N addition experiment in March 2017 in the Gurbantünggüt Desert, northwestern China. Four N addition rates, 0 (CK), 1.8 (LN), 3.6 (MN), and 7.2 (HN) g N m−2 yr−1, were applied, and soil was sampled at different seasons. We found that the effects of N addition on soil fungal communities varied with season, with stronger effects in November and March compared to May. Seasonal variation strongly affected fungal community structure, composition, and function, with the highest diversity index in May. The impact of N addition on fungal communities is attributed to changes in soil pH, total phosphorus, and available phosphorus, while the effect of season on fungal communities is driven by changes in temperature, soil moisture and soil organic carbon. Additionally, season has a greater effect on fungal communities than N addition. Overall, the fungal communities in soils underlying moss crusts responded strongly to seasonal variation, but their response to N addition was seasonally dependent.
许多研究报道了氮沉降变化对苔藓结皮土壤真菌群落结构和多样性的影响,但很少有研究涉及荒漠生境土壤真菌群落对氮输入响应的季节模式。因此,我们于2017年3月在中国西北部古尔班塔 ngg沙漠进行了一次田间施氮试验。施氮量分别为0 (CK)、1.8 (LN)、3.6 (MN)和7.2 (HN) g N m−2 yr−1,并在不同季节取样。结果表明,施氮对土壤真菌群落的影响随季节而变化,11月和3月的影响较5月强。季节变化对真菌群落结构、组成和功能影响较大,5月份多样性指数最高。氮添加对真菌群落的影响主要由土壤pH、全磷和速效磷的变化引起,而季节对真菌群落的影响主要由温度、土壤水分和土壤有机碳的变化引起。此外,季节对真菌群落的影响大于N添加量。总体而言,苔藓结壳下土壤真菌群落对季节变化有较强的响应,但对N添加的响应具有季节依赖性。
{"title":"Effects of nitrogen addition and seasonal changes on moss biocrust soil fungal communities in a temperate desert","authors":"Tingwen Huang ,&nbsp;Xi-En Long ,&nbsp;Weiguo Liu","doi":"10.1016/j.ejsobi.2024.103703","DOIUrl":"10.1016/j.ejsobi.2024.103703","url":null,"abstract":"<div><div>Many studies have reported that changes in nitrogen (N) deposition affect the structure and diversity of fungal communities in moss crust soils, but few studies have addressed the seasonal patterns of soil fungal community response to N inputs in desert habitats. Therefore, we conducted a one-time field N addition experiment in March 2017 in the Gurbantünggüt Desert, northwestern China. Four N addition rates, 0 (CK), 1.8 (LN), 3.6 (MN), and 7.2 (HN) g N m<sup>−2</sup> yr<sup>−1</sup>, were applied, and soil was sampled at different seasons. We found that the effects of N addition on soil fungal communities varied with season, with stronger effects in November and March compared to May. Seasonal variation strongly affected fungal community structure, composition, and function, with the highest diversity index in May. The impact of N addition on fungal communities is attributed to changes in soil pH, total phosphorus, and available phosphorus, while the effect of season on fungal communities is driven by changes in temperature, soil moisture and soil organic carbon. Additionally, season has a greater effect on fungal communities than N addition. Overall, the fungal communities in soils underlying moss crusts responded strongly to seasonal variation, but their response to N addition was seasonally dependent.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103703"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143153813","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Carbon and energy utilization in microbial cell extracts from soil 土壤微生物细胞提取物的碳和能量利用
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2025-01-30 DOI: 10.1016/j.ejsobi.2025.103713
Milan Varsadiya , Fatemeh Dehghani , Shiyue Yang , Evgenia Blagodatskaya , Thomas Maskow , Dimitri V. Meier , Tillmann Lueders
Microbial carbon use efficiency (CUE), the ratio of carbon retained in biomass vs. total C uptake, is central to our understanding of organic C turnover in soil. A precise quantification of CUE in soils can be challenging, given the considerable analytical uncertainties of organic and inorganic C backgrounds. At the same time, CUE measured for model pure cultures will be distinct from a diverse microbiota in soil. As a proxy between laboratory cultures and complex soil microbiomes, we tested soil-free microbial cell extracts (SFCE) to unravel patterns of C utilization in soil-derived microbiomes of reduced complexity. For this, we have revisited and optimized established protocols to extract microbial cells from agricultural soil via Nycodenz density centrifugation. The total extracted cells were quantified, accounting for up to ∼3.5 × 107 cells g−1 soil and representing ∼12.5 % of the original soil microbiome. The diversity of microbes in SFCE, while consistently reduced compared to soil, still retained a surprisingly high proportion of the original soil microbiome, with ASVs recovered from 21 phyla. We then inferred CUE from calorespirometric measurements (metabolic heat flow and CO2 production) to compare values between SFCE and intact soil. Both were amended with substrates (glucose, glutamine, and glycerol) of different C and N content, and C oxidation state (NOSC). SFCE showed CUE values principally comparable to that of the intact soil, but with substrate-specific distinctions. Amplicon sequencing and qPCR-based quantification showed typical soil taxa like Pseudomonas, Pseudarthrobacter, and Bacteroidota to respond to substrate addition in soil and SFCE. Our results support the use of SFCE as a valuable and complementary approach toward elucidating microbial CUE and growth patterns for complex soil microbiota.
微生物碳利用效率(CUE),即生物量中保留的碳与总碳吸收的比率,是我们理解土壤有机碳周转的核心。考虑到有机和无机碳背景的分析不确定性,土壤中CUE的精确定量可能具有挑战性。同时,为模型纯培养物测量的CUE将与土壤中的多种微生物群不同。作为实验室培养和复杂土壤微生物组之间的代理,我们测试了无土壤微生物细胞提取物(SFCE),以揭示复杂性降低的土壤来源微生物组对C的利用模式。为此,我们重新审视并优化了通过Nycodenz密度离心从农业土壤中提取微生物细胞的既定方案。对提取的总细胞进行了定量,占到~ 3.5 × 107个细胞g−1土壤,占原始土壤微生物组的~ 12.5%。与土壤相比,SFCE中微生物的多样性不断减少,但仍然保留了原始土壤微生物组的高比例,其中有21个门恢复了asv。然后,我们从热肺测量(代谢热流和二氧化碳产生)中推断出CUE,以比较SFCE和完整土壤之间的值。两者都用不同C、N含量和C氧化态(NOSC)的底物(葡萄糖、谷氨酰胺和甘油)进行修饰。SFCE的CUE值与完整土壤基本相当,但存在基质特异性差异。扩增子测序和基于qpcr的定量分析显示,假单胞菌、假节杆菌和拟杆菌属等典型土壤分类群对土壤基质添加和SFCE有响应。我们的研究结果支持SFCE作为一种有价值的补充方法来阐明复杂土壤微生物群的微生物CUE和生长模式。
{"title":"Carbon and energy utilization in microbial cell extracts from soil","authors":"Milan Varsadiya ,&nbsp;Fatemeh Dehghani ,&nbsp;Shiyue Yang ,&nbsp;Evgenia Blagodatskaya ,&nbsp;Thomas Maskow ,&nbsp;Dimitri V. Meier ,&nbsp;Tillmann Lueders","doi":"10.1016/j.ejsobi.2025.103713","DOIUrl":"10.1016/j.ejsobi.2025.103713","url":null,"abstract":"<div><div>Microbial carbon use efficiency (CUE), the ratio of carbon retained in biomass vs. total C uptake, is central to our understanding of organic C turnover in soil. A precise quantification of CUE in soils can be challenging, given the considerable analytical uncertainties of organic and inorganic C backgrounds. At the same time, CUE measured for model pure cultures will be distinct from a diverse microbiota in soil. As a proxy between laboratory cultures and complex soil microbiomes, we tested soil-free microbial cell extracts (SFCE) to unravel patterns of C utilization in soil-derived microbiomes of reduced complexity. For this, we have revisited and optimized established protocols to extract microbial cells from agricultural soil via Nycodenz density centrifugation. The total extracted cells were quantified, accounting for up to ∼3.5 × 10<sup>7</sup> cells g<sup>−1</sup> soil and representing ∼12.5 % of the original soil microbiome. The diversity of microbes in SFCE, while consistently reduced compared to soil, still retained a surprisingly high proportion of the original soil microbiome, with ASVs recovered from 21 phyla. We then inferred CUE from calorespirometric measurements (metabolic heat flow and CO<sub>2</sub> production) to compare values between SFCE and intact soil. Both were amended with substrates (glucose, glutamine, and glycerol) of different C and N content, and C oxidation state (NOSC). SFCE showed CUE values principally comparable to that of the intact soil, but with substrate-specific distinctions. Amplicon sequencing and qPCR-based quantification showed typical soil taxa like <em>Pseudomonas</em>, <em>Pseudarthrobacter</em>, and <em>Bacteroidota</em> to respond to substrate addition in soil and SFCE. Our results support the use of SFCE as a valuable and complementary approach toward elucidating microbial CUE and growth patterns for complex soil microbiota.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103713"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143152991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Responses of soil microbial community structure under litter to changes in precipitation and nitrogen addition in a desert steppe 荒漠草原凋落物下土壤微生物群落结构对降水和氮添加变化的响应
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2024-11-30 DOI: 10.1016/j.ejsobi.2024.103696
Jinpeng Ma , Lin Chen , Danbo Pang , Yinglong Chen , Mengyao Wu , Yaqi Zhang , Wenqiang He , Xuebin Li
Soil microorganisms are essential in maintaining terrestrial ecosystem function and are central drivers of soil-plant nutrient cycling. However, relatively few studies have explored the impact of precipitation and nitrogen (N) addition on soil microbial community structure beneath litter. In this study, we conducted a field simulation control experiment on litter decomposition under varying precipitation regimes (normal, increased by 30 %, and decreased by 30 %) and N addition levels (0 and 10 g m−2 y−1) in the desert steppe of Yanchi County, China. Our findings revealed that changes in precipitation and N addition promoted litter decomposition and caused the accumulation of soil nutrients. Specifically, N addition significantly increased nitrate nitrogen (51.95 %), ammonium nitrogen (42.92 %), soil organic carbon (6.81 %), and total phosphorus (7.82 %)(P<0.05), decreased precipitation significantly elevated contents of nitrate nitrogen (26.80 %), total nitrogen (24.47 %), soil organic carbon (37.62 %), total phosphorus (22.78 %), and microbial biomass C (33.20 %) (P<0.05). N addition decreased microbial biomarkers content by 1.13 %, but increased microbial diversity indices (Shannon-Wiener index (1.53 %), Brillouin diversity index (0.54 %), Pielou evenness index (1.12 %), Simpson dominance index (0.91 %), Mcintosh diversity index (1.11 %)) (P<0.05). Meanwhile, decreased precipitation significantly enhanced microbial biomarkers content by 5.83 % and diversity indices (Shannon-Wiener index (3.67 %), Brillouin diversity index (2.16 %), Pielou evenness index (1.55 %), Simpson dominance index (1.82 %), Mcintosh diversity index (2.63 %)) (P<0.05). We indicated the decreased precipitation enhanced the effect of N addition on microbial community and diversity, while increased precipitation showed the opposite trend. Redundancy analysis highlighted MBC as a critical factor influencing microbial community structure, accounting for 35.3 % of the variation (P<0.01). This study provides valuable insights into managing and conserving desert steppe ecosystems.
土壤微生物对维持陆地生态系统功能至关重要,是土壤-植物养分循环的核心驱动力。然而,关于降水和氮添加对凋落物下土壤微生物群落结构影响的研究相对较少。在盐池县荒漠草原进行了不同降水(正常、增加30%和减少30%)和N添加水平(0和10 g m−2 y−1)下凋落物分解的野外模拟对照试验。结果表明,降水和施氮量的变化促进了凋落物的分解,引起了土壤养分的积累。其中,氮添加显著提高了硝态氮(51.95%)、铵态氮(42.92%)、土壤有机碳(6.81%)和全磷(7.82%)含量(P<0.05);降水减少显著提高了硝态氮(26.80%)、全氮(24.47%)、土壤有机碳(37.62%)、全磷(22.78%)和微生物生物量C(33.20%)含量(P<0.05)。添加氮使微生物生物标志物含量降低了1.13%,而微生物多样性指数(Shannon-Wiener指数(1.53%)、Brillouin多样性指数(0.54%)、Pielou均匀度指数(1.12%)、Simpson优势度指数(0.91%)、Mcintosh多样性指数(1.11%))升高(P<0.05)。同时,降水减少使微生物生物标志物含量和多样性指数(Shannon-Wiener指数(3.67%)、Brillouin多样性指数(2.16%)、Pielou均匀度指数(1.55%)、Simpson优势度指数(1.82%)、Mcintosh多样性指数(2.63%))显著提高了5.83% (P<0.05)。结果表明,降水减少增强了氮添加对微生物群落和多样性的影响,而降水增加则相反。冗余分析显示MBC是影响微生物群落结构的关键因素,占变异量的35.3% (P<0.01)。该研究为管理和保护荒漠草原生态系统提供了有价值的见解。
{"title":"Responses of soil microbial community structure under litter to changes in precipitation and nitrogen addition in a desert steppe","authors":"Jinpeng Ma ,&nbsp;Lin Chen ,&nbsp;Danbo Pang ,&nbsp;Yinglong Chen ,&nbsp;Mengyao Wu ,&nbsp;Yaqi Zhang ,&nbsp;Wenqiang He ,&nbsp;Xuebin Li","doi":"10.1016/j.ejsobi.2024.103696","DOIUrl":"10.1016/j.ejsobi.2024.103696","url":null,"abstract":"<div><div>Soil microorganisms are essential in maintaining terrestrial ecosystem function and are central drivers of soil-plant nutrient cycling. However, relatively few studies have explored the impact of precipitation and nitrogen (N) addition on soil microbial community structure beneath litter. In this study, we conducted a field simulation control experiment on litter decomposition under varying precipitation regimes (normal, increased by 30 %, and decreased by 30 %) and N addition levels (0 and 10 g m<sup>−2</sup> y<sup>−1</sup>) in the desert steppe of Yanchi County, China. Our findings revealed that changes in precipitation and N addition promoted litter decomposition and caused the accumulation of soil nutrients. Specifically, N addition significantly increased nitrate nitrogen (51.95 %), ammonium nitrogen (42.92 %), soil organic carbon (6.81 %), and total phosphorus (7.82 %)(<em>P</em><0.05), decreased precipitation significantly elevated contents of nitrate nitrogen (26.80 %), total nitrogen (24.47 %), soil organic carbon (37.62 %), total phosphorus (22.78 %), and microbial biomass C (33.20 %) (<em>P</em><0.05). N addition decreased microbial biomarkers content by 1.13 %, but increased microbial diversity indices (<em>Shannon-Wiener</em> index (1.53 %)<em>, Brillouin</em> diversity index (0.54 %)<em>, Pielou</em> evenness index (1.12 %)<em>, Simpson</em> dominance index (0.91 %)<em>, Mcintosh</em> diversity index (1.11 %)) (<em>P</em><0.05). Meanwhile, decreased precipitation significantly enhanced microbial biomarkers content by 5.83 % and diversity indices (<em>Shannon-Wiener</em> index (3.67 %)<em>, Brillouin</em> diversity index (2.16 %)<em>, Pielou</em> evenness index (1.55 %)<em>, Simpson</em> dominance index (1.82 %)<em>, Mcintosh</em> diversity index (2.63 %)) (<em>P</em><0.05). We indicated the decreased precipitation enhanced the effect of N addition on microbial community and diversity, while increased precipitation showed the opposite trend. Redundancy analysis highlighted MBC as a critical factor influencing microbial community structure, accounting for 35.3 % of the variation (<em>P</em><0.01). This study provides valuable insights into managing and conserving desert steppe ecosystems.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103696"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142756786","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Legacy effects of grazing and nitrogen fertilization on soil carbon, nitrogen and phosphorus in an alpine meadow on the Qinghai-Tibetan Plateau 放牧与施氮对青藏高原高寒草甸土壤碳、氮、磷的影响
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2024-12-10 DOI: 10.1016/j.ejsobi.2024.103704
Lan Li , Xiong Zhao He , Yi Sun , Tianhao Xiao , Yang Liu , Fujiang Hou
Increasing soil carbon (C) and nitrogen (N) storage can help mitigate climate change and sustain soil fertility. Changes in herbivore and anthropogenic nutrient enrichment intensities can lead to dramatic shifts in the plant and microbial communities, soil organic carbon (SOC) and nutrient dynamics. However, the legacy effects of grazing and N enrichment on the biogeochemical processes remain unclear. Here, we conducted a 6-year rotational grazing (Stocking rates: 0, 8 and 16 sheep ha−1) and 4-year N-addition (N addition levels: 0, 50, 100 and 200 kg N ha−1 yr−1) experiment to investigate how soil C, N and phosphorus (P) components respond to the legacy effects of grazing and N fertilization after a 3-year cessation of grazing and N addition treatments in an alpine meadow on the Qinghai-Tibetan Plateau (QTP). We show that previous grazing significantly increased soil total nitrogen (STN), slightly increased SOC and decreased soil total phosphorus (STP); while previous N fertilization significantly decreased SOC, but it did not significantly alter STN and STP. Previous grazing at low stocking rates (≤ 8 sheep ha−1) might amplify the negative legacy effects of N fertilization on SOC, while a higher stocking rate would weaken the negative impacts of previous N fertilization on SOC. The interactive and synergistic impacts of historical grazing and N fertilization induced a significantly negative effect on STP. Previous N fertilization decreased soil microbial carbon (MBC) and increased soil available N:P, resulting in the reduction of SOC. The increase in plant diversity caused by previous grazing increased SOC, which counteracted the negative effects of increasing bacterial diversity. Previous grazing-induced decreasing bacterial community heterogeneity may lead to increased STN. Although previous grazing-induced increases in soil moisture and soil nutrient availability may have positive effects on STP, previous grazing-induced negative effects on STP may exceed those positive effects. Therefore, the legacy effects of grazing could be beneficial for improving soil C and N, but may increase the risk of soil P loss in the short term, while residual exogenous N could pose a detrimental effect on C storage over time. Reintroducing grazing and/or P addition may be an appropriate choice to offset the adverse consequence of N deposition in the context of global change. Our findings suggest that the stocking rate at about 8 sheep ha−1 could be a suitable grassland management technique for soil fertility sequestration and mitigating the negative influences of residual exogenous N in the QTP.
增加土壤碳(C)和氮(N)储量有助于减缓气候变化和维持土壤肥力。草食和人为养分富集强度的变化会导致植物和微生物群落、土壤有机碳(SOC)和养分动态的剧烈变化。然而,放牧和氮富集对生物地球化学过程的遗留效应尚不清楚。本研究以青藏高原高寒草甸为研究对象,进行了6年轮牧(放养率分别为0、8和16羊)和4年N添加(N添加水平分别为0、50、100和200 kg N ha−1年−1)试验,研究停牧3年后土壤C、N和磷(P)组分对放牧和N施肥遗留效应的响应。结果表明:以往的放牧显著提高了土壤全氮(STN),略微提高了土壤有机碳(SOC),降低了土壤全磷(STP);前施氮肥显著降低了土壤有机碳含量,但对STN和STP的影响不显著。以往低载畜率(≤8羊/ ha - 1)放牧可能会放大氮肥对有机碳的负遗留效应,而较高的载畜率则会减弱以往氮肥对有机碳的负遗留效应。历史放牧和氮肥的交互和协同效应对植物STP产生了显著的负向影响。前施氮肥降低了土壤微生物碳(MBC),增加了土壤有效氮磷,导致土壤有机碳(SOC)减少。以往放牧引起的植物多样性增加增加了土壤有机碳,抵消了细菌多样性增加的负面影响。先前放牧导致的细菌群落异质性降低可能导致STN增加。虽然以往放牧引起的土壤水分和土壤养分有效性的增加可能对STP有积极影响,但以往放牧引起的STP的负面影响可能超过这些积极影响。因此,放牧的遗留效应可能有利于改善土壤C和N,但可能在短期内增加土壤P损失的风险,而外源残余N可能对长期的C储存造成不利影响。在全球变化的背景下,重新引入放牧和/或磷添加可能是抵消氮沉降不利影响的适当选择。研究结果表明,8羊/ ha - 1左右的放养率可能是土壤肥力封存和减轻QTP中外源残余氮负面影响的合适草地管理技术。
{"title":"Legacy effects of grazing and nitrogen fertilization on soil carbon, nitrogen and phosphorus in an alpine meadow on the Qinghai-Tibetan Plateau","authors":"Lan Li ,&nbsp;Xiong Zhao He ,&nbsp;Yi Sun ,&nbsp;Tianhao Xiao ,&nbsp;Yang Liu ,&nbsp;Fujiang Hou","doi":"10.1016/j.ejsobi.2024.103704","DOIUrl":"10.1016/j.ejsobi.2024.103704","url":null,"abstract":"<div><div>Increasing soil carbon (C) and nitrogen (N) storage can help mitigate climate change and sustain soil fertility. Changes in herbivore and anthropogenic nutrient enrichment intensities can lead to dramatic shifts in the plant and microbial communities, soil organic carbon (SOC) and nutrient dynamics. However, the legacy effects of grazing and N enrichment on the biogeochemical processes remain unclear. Here, we conducted a 6-year rotational grazing (Stocking rates: 0, 8 and 16 sheep ha<sup>−1</sup>) and 4-year N-addition (N addition levels: 0, 50, 100 and 200 kg N ha<sup>−1</sup> yr<sup>−1</sup>) experiment to investigate how soil C, N and phosphorus (P) components respond to the legacy effects of grazing and N fertilization after a 3-year cessation of grazing and N addition treatments in an alpine meadow on the Qinghai-Tibetan Plateau (QTP). We show that previous grazing significantly increased soil total nitrogen (STN), slightly increased SOC and decreased soil total phosphorus (STP); while previous N fertilization significantly decreased SOC, but it did not significantly alter STN and STP. Previous grazing at low stocking rates (≤ 8 sheep ha<sup>−1</sup>) might amplify the negative legacy effects of N fertilization on SOC, while a higher stocking rate would weaken the negative impacts of previous N fertilization on SOC. The interactive and synergistic impacts of historical grazing and N fertilization induced a significantly negative effect on STP. Previous N fertilization decreased soil microbial carbon (MBC) and increased soil available N:P, resulting in the reduction of SOC. The increase in plant diversity caused by previous grazing increased SOC, which counteracted the negative effects of increasing bacterial diversity. Previous grazing-induced decreasing bacterial community heterogeneity may lead to increased STN. Although previous grazing-induced increases in soil moisture and soil nutrient availability may have positive effects on STP, previous grazing-induced negative effects on STP may exceed those positive effects. Therefore, the legacy effects of grazing could be beneficial for improving soil C and N, but may increase the risk of soil P loss in the short term, while residual exogenous N could pose a detrimental effect on C storage over time. Reintroducing grazing and/or P addition may be an appropriate choice to offset the adverse consequence of N deposition in the context of global change. Our findings suggest that the stocking rate at about 8 sheep ha<sup>−1</sup> could be a suitable grassland management technique for soil fertility sequestration and mitigating the negative influences of residual exogenous N in the QTP.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103704"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143153814","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fire and clipping drive microbial fixation pathways in soil phosphorus and sulfur cycling in China's key karst region 中国喀斯特重点地区土壤磷硫循环的微生物固定途径
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2025-01-04 DOI: 10.1016/j.ejsobi.2024.103707
Ansa Rebi , Guan Wang , Irsa Ejaz , Trevan Flynn , Jasper Kanomanyanga , Tao Yang , Adnan Mustafa , Jinxing Zhou
Despite growing interest in nutrient cycling genes, the influence of fire and clipping on soil microbes, phosphorus (P) and sulfur (S) cycling genes in Karst landscape remain unclear yet are critical for soil fertility in vegetation restoration landscape. Microorganisms have developed various adaptive mechanisms to improve nutrient availability in the soil in response to various landscape disturbances. In this study, we analyzed soil microbial communities and their role in mediating 90 P and 46 S genes under five fire and clipping management practices including: high-intensity fire (HIF), low-intensity fire (LIF), clipping and fire (CF), clipping (CP), and undisturbed control (CK) in Jianshui research station, Yunan province, China. The results indicated no significant (p < 0.05) differences in the predominant bacterial and fungal genera among the treatments. For bacterial compositions such as Sphingomonas, the relative abundance was highest (0.069 %) in LIF. In contrast, the relative abundance of Micromonospora was lowest (0.012 %) in LIF compared to CK. In the case of the fungal genus, Rhizophagus and Trichophyton were highest (0.187, 0.128 %) in CP and LIF respectively compared to control. Bacterial diversity was highest in CF (4.69) following the CK (4.71) while Fungal diversity was highest in CP (3.33) following the CK. P cycling genes increased in LIF, particularly those related to organic phosphoester hydrolysis and transporters, while the other treatments showed no considerable changes. S cycling genes related to S mineralization and assimilation increased in HIF and LIF, respectively, with CF showing a higher presence of sulfide cycling genes. Network analysis of P and S cycling genes indicated that S interactions formed tighter clusters under fire and clipping treatments, while P interactions had more extensive connectivity among genes. These findings underscore the distinct roles and network behaviours of P and S and provide valuable insights into the microbial mechanisms that regulate P availability and S cycling in Karst soils treated with fire and clipping. This also sheds light on the taxonomy of the microbes involved in informed decision-making in karst landscape management.
尽管人们对养分循环基因的研究越来越感兴趣,但火灾和修剪对喀斯特景观土壤微生物、磷(P)和硫(S)循环基因的影响尚不清楚,但它们对植被恢复景观中土壤肥力的影响至关重要。微生物已经发展出各种适应机制来改善土壤中的养分有效性,以应对各种景观干扰。本研究以云南建水研究站为研究对象,分析了在高强度火灾(HIF)、低强度火灾(LIF)、刈割和火灾(CF)、刈割(CP)和无干扰对照(CK) 5种管理方式下,土壤微生物群落及其对90个P和46个S基因的调控作用。结果显示无显著差异(p <;不同处理间优势菌属和真菌属的差异(0.05)。对鞘氨单胞菌等细菌组成,LIF中相对丰度最高(0.069%)。而小单孢子菌的相对丰度在中试中最低(0.012%)。真菌属中,根食菌和毛食菌的CP和LIF分别高于对照(0.187、0.128%)。细菌多样性在对照处理后的CF组最高(4.69),真菌多样性在对照处理后的CP组最高(3.33)。P循环基因在LIF中增加,特别是与有机磷酸酯水解和转运体相关的基因,而其他处理没有明显变化。与硫矿化和同化相关的硫循环基因在HIF和LIF中分别增加,CF中硫循环基因的存在更高。P和S循环基因的网络分析表明,在火烧和剪枝处理下,S互作形成了更紧密的簇,而P互作在基因间具有更广泛的连接。这些发现强调了磷和硫的不同作用和网络行为,并为研究火剪喀斯特土壤中调控磷有效性和硫循环的微生物机制提供了有价值的见解。这也揭示了喀斯特景观管理中参与明智决策的微生物分类学。
{"title":"Fire and clipping drive microbial fixation pathways in soil phosphorus and sulfur cycling in China's key karst region","authors":"Ansa Rebi ,&nbsp;Guan Wang ,&nbsp;Irsa Ejaz ,&nbsp;Trevan Flynn ,&nbsp;Jasper Kanomanyanga ,&nbsp;Tao Yang ,&nbsp;Adnan Mustafa ,&nbsp;Jinxing Zhou","doi":"10.1016/j.ejsobi.2024.103707","DOIUrl":"10.1016/j.ejsobi.2024.103707","url":null,"abstract":"<div><div>Despite growing interest in nutrient cycling genes, the influence of fire and clipping on soil microbes, phosphorus (P) and sulfur (S) cycling genes in Karst landscape remain unclear yet are critical for soil fertility in vegetation restoration landscape. Microorganisms have developed various adaptive mechanisms to improve nutrient availability in the soil in response to various landscape disturbances. In this study, we analyzed soil microbial communities and their role in mediating 90 P and 46 S genes under five fire and clipping management practices including: high-intensity fire (HIF), low-intensity fire (LIF), clipping and fire (CF), clipping (CP), and undisturbed control (CK) in Jianshui research station, Yunan province, China. The results indicated no significant (p &lt; 0.05) differences in the predominant bacterial and fungal genera among the treatments. For bacterial compositions such as Sphingomonas, the relative abundance was highest (0.069 %) in LIF. In contrast, the relative abundance of Micromonospora was lowest (0.012 %) in LIF compared to CK. In the case of the fungal genus, Rhizophagus and Trichophyton were highest (0.187, 0.128 %) in CP and LIF respectively compared to control. Bacterial diversity was highest in CF (4.69) following the CK (4.71) while Fungal diversity was highest in CP (3.33) following the CK. P cycling genes increased in LIF, particularly those related to organic phosphoester hydrolysis and transporters, while the other treatments showed no considerable changes. S cycling genes related to S mineralization and assimilation increased in HIF and LIF, respectively, with CF showing a higher presence of sulfide cycling genes. Network analysis of P and S cycling genes indicated that S interactions formed tighter clusters under fire and clipping treatments, while P interactions had more extensive connectivity among genes. These findings underscore the distinct roles and network behaviours of P and S and provide valuable insights into the microbial mechanisms that regulate P availability and S cycling in Karst soils treated with fire and clipping. This also sheds light on the taxonomy of the microbes involved in informed decision-making in karst landscape management.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103707"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143152989","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Soil bacterial communities benefit from long-term cover crop mixtures 土壤细菌群落受益于长期混合覆盖作物
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2025-03-04 DOI: 10.1016/j.ejsobi.2025.103714
Biyensa Gurmessa , Ranjith P. Udawatta , R. Tharindu Rambadagalla , Timothy Reinbott
Understanding the long-term impacts of cover cropping on soil health indicators is vital for developing sustainable farming practices. The aim of the current study was to investigate the impacts of long-term mixed cover crops practice in a no-till system on soil bacterial community abundance and diversity using 16S rRNA sequencing. We compared three cover crop practices againist a no-cover crop control (NCC): cereal rye only (Rye), a mixture of cereal rye and hairy vetch (RyeHV), and a mixture of cereal rye, hairy vetch, crimson clover, and Australian winter pea (Mixed). These treatments were arranged in a completely randomized block design with four replications. The abundance of soil bacteria was lower in the Rye treatment compared to the Mixed and RyeHV treatments, possibly due to the uniform supply of resources (exudates) and the limited root structure, rather than due to the increased soil bulk density or reduced organic carbon. This reduction was observed in the total operational taxonomic units and the dominant taxa groups, including Actinobacteria, Proteobacteria, Firmicutes, and Acidobacteria. Non-metric Multidimensional Scaling analysis, using Bray-Curtis dissimilarity, revealed distinct bacterial community structure between the Rye and the rest of treatments, but with a potential overlap of that of NCC with all the cover crop treatments. In conclusion, our study revealed that unlike mixed species cover crops, a single species cover crops may compete for resources with soil bacterial community, leading to a reduced abundance of soil bacteria. Moreover, possible positive impact of cover cropping on soil physicochemical properties may not always have relationships with soil bacterial alpha diversity. Future research should explore attributes of mixed cover crops that may be crucial in driving microbial community structure.
了解覆盖种植对土壤健康指标的长期影响,对于发展可持续农业做法至关重要。本研究旨在利用16S rRNA测序技术研究免耕制度下长期混作覆盖作物对土壤细菌群落丰度和多样性的影响。我们将三种覆盖作物与无覆盖作物控制(NCC)进行了比较:仅谷物黑麦(rye),谷物黑麦和毛豌豆的混合物(RyeHV),谷物黑麦,毛豌豆,深红色三叶草和澳大利亚冬豆的混合物(Mixed)。这些处理采用完全随机区组设计,每组4个重复。黑麦处理土壤细菌丰度低于混合处理和黑麦处理,可能是由于资源(渗出物)供应均匀和根系结构有限,而不是由于土壤容重增加或有机碳减少。在总操作分类单位和优势分类群(包括放线菌门、变形菌门、厚壁菌门和酸杆菌门)中观察到这种减少。利用Bray-Curtis差异进行非度量多维尺度分析,发现黑麦与其他处理之间存在明显的细菌群落结构差异,但黑麦与所有覆盖作物处理之间存在潜在的重叠。综上所述,与混合种覆盖作物不同,单一种覆盖作物可能会与土壤细菌群落争夺资源,导致土壤细菌丰度降低。此外,覆盖种植对土壤理化性质可能产生的积极影响并不总是与土壤细菌α多样性有关。未来的研究应探索混合覆盖作物的属性,这些属性可能对驱动微生物群落结构至关重要。
{"title":"Soil bacterial communities benefit from long-term cover crop mixtures","authors":"Biyensa Gurmessa ,&nbsp;Ranjith P. Udawatta ,&nbsp;R. Tharindu Rambadagalla ,&nbsp;Timothy Reinbott","doi":"10.1016/j.ejsobi.2025.103714","DOIUrl":"10.1016/j.ejsobi.2025.103714","url":null,"abstract":"<div><div>Understanding the long-term impacts of cover cropping on soil health indicators is vital for developing sustainable farming practices. The aim of the current study was to investigate the impacts of long-term mixed cover crops practice in a no-till system on soil bacterial community abundance and diversity using 16S rRNA sequencing. We compared three cover crop practices againist a no-cover crop control (NCC): cereal rye only (Rye), a mixture of cereal rye and hairy vetch (RyeHV), and a mixture of cereal rye, hairy vetch, crimson clover, and Australian winter pea (Mixed). These treatments were arranged in a completely randomized block design with four replications. The abundance of soil bacteria was lower in the Rye treatment compared to the Mixed and RyeHV treatments, possibly due to the uniform supply of resources (exudates) and the limited root structure, rather than due to the increased soil bulk density or reduced organic carbon. This reduction was observed in the total operational taxonomic units and the dominant taxa groups, including Actinobacteria, Proteobacteria, Firmicutes, and Acidobacteria. Non-metric Multidimensional Scaling analysis, using Bray-Curtis dissimilarity, revealed distinct bacterial community structure between the Rye and the rest of treatments, but with a potential overlap of that of NCC with all the cover crop treatments. In conclusion, our study revealed that unlike mixed species cover crops, a single species cover crops may compete for resources with soil bacterial community, leading to a reduced abundance of soil bacteria. Moreover, possible positive impact of cover cropping on soil physicochemical properties may not always have relationships with soil bacterial alpha diversity. Future research should explore attributes of mixed cover crops that may be crucial in driving microbial community structure.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103714"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143549154","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of long-term sugarcane-soybean intercropping coupled with varying levels of nitrogen input on soil legacies: A field experimental study 长期甘蔗-大豆间作配施不同氮素水平对土壤遗传的影响:田间试验研究
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2025-01-30 DOI: 10.1016/j.ejsobi.2025.103711
Shiqiang Ge , Muhammad Shoaib Rana , Zixuan Li , Yongjian Chen , Zixuan Wang , Chang Shen , Tantan Zhang , Yinghua Shu , Jianwu Wang
Long-term agricultural management practices alter the biochemical properties of soil, leading to the formation of distinct soil legacies. Sugarcane-soybean intercropping is recognized as a sustainable and stable agricultural practice, while the application of nitrogen (N) fertilizer is essential for enhancing crop yields. However, research on the effects of long-term sugarcane-soybean intercropping coupled with varying N levels on soil legacies remains limited. Therefore, we selected four treatments in a long-term field experiment: sugarcane monoculture with reduced N application (MSN1), sugarcane monoculture with conventional N application (MSN2), sugarcane-soybean intercropping with reduced N application (SB2N1), and sugarcane-soybean intercropping with conventional N application (SB2N2). The study aims to investigate the effects of soybean intercropping coupled with varying N application levels on soil abiotic (chemical properties) and biotic (microbial communities) legacies. The results showed that under conventional N application (525 kg ha−1), intercropping, compared to monoculture, significantly increased the contents of total potassium (TK), nitrate nitrogen (NO3), available zinc (AZn) and the network complexity of the arbuscular mycorrhizal fungi (AMF) community. Under intercropping conditions, reduced N application (300 kg ha⁻1), compared to conventional N application, significantly increased the content of exchangeable calcium (ECa), pH, as well as the alpha diversity and network complexity of the bacterial community. Under monocropping conditions, conventional N application significantly increased the complexity of the bacterial community network. Stochastic processes dominated the assembly of bacterial and AMF communities, but under the same cropping pattern, deterministic processes in fungal communities increased with N application. Soil pH, N nutrients, and trace metal elements are key factors affecting the diversity and composition of soil microbial communities. These findings highlight the significant impact of intercropped soybean on soil legacies, whereas the N level of application plays a key role in regulating the effectiveness of biotic and abiotic soil legacies. This study provides valuable insights into managing soil legacies and provides a theoretical basis for the development of sustainable agriculture.
长期的农业管理实践改变了土壤的生化特性,从而形成了独特的土壤遗产。甘蔗-大豆间作是公认的可持续稳定的农业生产方式,而氮肥的施用是提高作物产量的关键。然而,长期甘蔗-大豆间作配施不同氮水平对土壤遗传影响的研究仍然有限。因此,本研究选择甘蔗单作减氮(MSN1)、甘蔗单作常规施氮(MSN2)、甘蔗-大豆间作减氮(SB2N1)和甘蔗-大豆间作常规施氮(SB2N2) 4个处理进行长期田间试验。本研究旨在探讨大豆间作配施不同施氮量对土壤非生物(化学性质)和生物(微生物群落)遗传的影响。结果表明,在常规施氮(525 kg ha−1)条件下,套作与单作相比,显著提高了丛枝菌根真菌(AMF)群落的总钾(TK)、硝态氮(NO3−)、有效锌(AZn)含量和网络复杂性。间作条件下,与常规施氮相比,减少施氮量(300 kg ha - 1)显著提高了土壤中交换性钙(ECa)含量、pH值以及细菌群落的α多样性和网络复杂性。在单作条件下,常规施氮显著增加了细菌群落网络的复杂性。细菌和AMF群落的聚集以随机过程为主,但在相同种植模式下,真菌群落的聚集随施氮量的增加而增加。土壤pH、N养分和微量金属元素是影响土壤微生物群落多样性和组成的关键因素。这些结果表明间作大豆对土壤遗传的影响显著,而施氮水平在调节生物和非生物土壤遗传的有效性中起关键作用。该研究为土壤遗产管理提供了有价值的见解,并为可持续农业的发展提供了理论依据。
{"title":"Effects of long-term sugarcane-soybean intercropping coupled with varying levels of nitrogen input on soil legacies: A field experimental study","authors":"Shiqiang Ge ,&nbsp;Muhammad Shoaib Rana ,&nbsp;Zixuan Li ,&nbsp;Yongjian Chen ,&nbsp;Zixuan Wang ,&nbsp;Chang Shen ,&nbsp;Tantan Zhang ,&nbsp;Yinghua Shu ,&nbsp;Jianwu Wang","doi":"10.1016/j.ejsobi.2025.103711","DOIUrl":"10.1016/j.ejsobi.2025.103711","url":null,"abstract":"<div><div>Long-term agricultural management practices alter the biochemical properties of soil, leading to the formation of distinct soil legacies. Sugarcane-soybean intercropping is recognized as a sustainable and stable agricultural practice, while the application of nitrogen (N) fertilizer is essential for enhancing crop yields. However, research on the effects of long-term sugarcane-soybean intercropping coupled with varying N levels on soil legacies remains limited. Therefore, we selected four treatments in a long-term field experiment: sugarcane monoculture with reduced N application (MSN1), sugarcane monoculture with conventional N application (MSN2), sugarcane-soybean intercropping with reduced N application (SB2N1), and sugarcane-soybean intercropping with conventional N application (SB2N2). The study aims to investigate the effects of soybean intercropping coupled with varying N application levels on soil abiotic (chemical properties) and biotic (microbial communities) legacies. The results showed that under conventional N application (525 kg ha<sup>−1</sup>), intercropping, compared to monoculture, significantly increased the contents of total potassium (TK), nitrate nitrogen (NO<sub>3</sub><sup>−</sup>), available zinc (AZn) and the network complexity of the arbuscular mycorrhizal fungi (AMF) community. Under intercropping conditions, reduced N application (300 kg ha⁻<sup>1</sup>), compared to conventional N application, significantly increased the content of exchangeable calcium (ECa), pH, as well as the alpha diversity and network complexity of the bacterial community. Under monocropping conditions, conventional N application significantly increased the complexity of the bacterial community network. Stochastic processes dominated the assembly of bacterial and AMF communities, but under the same cropping pattern, deterministic processes in fungal communities increased with N application. Soil pH, N nutrients, and trace metal elements are key factors affecting the diversity and composition of soil microbial communities. These findings highlight the significant impact of intercropped soybean on soil legacies, whereas the N level of application plays a key role in regulating the effectiveness of biotic and abiotic soil legacies. This study provides valuable insights into managing soil legacies and provides a theoretical basis for the development of sustainable agriculture.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103711"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143153809","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biosolids blended with edaphic supports mimic structural and biochemical features of natural soils and foster plant biomass growth 生物固体与土壤支撑物混合,模拟天然土壤的结构和生化特征,促进植物生物量的生长
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-03-01 Epub Date: 2025-01-24 DOI: 10.1016/j.ejsobi.2025.103709
Filipe Behrends Kraemer , Diana P. Wehrendt , Anabella Tobler , Daiana Sainz , Lucas Barbieri Oliveri , Linda Jungwirth , Paula Fontana , Cristian Weigandt , Patricia L. Fernández , Melisa Altina , Leandro D. Guerrero , Rodrigo Pontiggia , Leonardo Erijman
Biosolids can be blended with edaphic components to formulate customized soil mixes (Technosols), where specific nutrient levels, moisture content, and other factors are tailored to support plant growth. The aim of this work was to evaluate constructed Technosols regarding specific physical, rheological, and biochemical characteristics, as well as for their ability to meet the growth requirements of rye grass. Soil horizons A and C, and quarry waste, were examined both individually as controls and in binary combinations with biosolids, maintaining a ratio of 70:30 in a replicated pot experiment. After 35 days, half of the pots were seeded with ryegrass (Lolium perenne ssp). After 3,5 months, the following physical, chemical, and rheological properties were measured: bulk density; plastic limit; liquid limit; saturated hydraulic conductivity; aggregate stability, organic matter and total Kjeldahl nitrogen. Enzyme activities were determined using fluorogenic substrates, whereas total bacterial and fungal composition was assessed through qPCR and amplicon sequencing using respectively 16S rRNA gene and ITS gene primers. Biosolids-based Technosols exhibited soil-like behavior across various examined variables, such as aggregate stability, microbial community composition and the yield of harvested plant biomass. Changes in the physical and chemical characteristics of mixtures containing biosolids were accompanied by corresponding changes in enzyme activities, as well as by shifts in absolute bacterial and fungal abundance. Biosolid-based Technosols possess the capability to establish sustainable and effective aggregation conditions, maintaining satisfactory water retention levels, and fostering favorable microbiological and biochemical conditions to fulfill essential soil functions, including biomass production.
生物固体可以与土壤成分混合,形成定制的土壤混合物(Technosols),其中特定的营养水平、水分含量和其他因素是量身定制的,以支持植物生长。本工作的目的是评价构建的技术溶胶在特定的物理、流变学和生化特性,以及它们满足黑麦草生长要求的能力。土壤层A和层C以及采石场废物分别作为对照和与生物固体的二元组合进行了研究,在重复盆栽试验中保持70:30的比例。35天后,一半的盆栽播种黑麦草(Lolium perenne ssp)。3、5个月后,测量以下物理、化学和流变性能:堆积密度;塑性极限;液限;饱和水力导率;团聚体稳定性、有机质和总凯氏定氮。使用荧光底物测定酶活性,而通过qPCR和扩增子测序分别使用16S rRNA基因和ITS基因引物评估细菌和真菌的总组成。基于生物固体的技术溶胶在各种检测变量中表现出类似土壤的行为,如团聚体稳定性、微生物群落组成和收获的植物生物量的产量。含有生物固体的混合物的物理和化学特性的变化伴随着相应的酶活性的变化,以及绝对细菌和真菌丰度的变化。基于生物固体的技术溶胶能够建立可持续和有效的聚集条件,保持令人满意的保水水平,并培养有利的微生物和生化条件,以实现基本的土壤功能,包括生物质生产。
{"title":"Biosolids blended with edaphic supports mimic structural and biochemical features of natural soils and foster plant biomass growth","authors":"Filipe Behrends Kraemer ,&nbsp;Diana P. Wehrendt ,&nbsp;Anabella Tobler ,&nbsp;Daiana Sainz ,&nbsp;Lucas Barbieri Oliveri ,&nbsp;Linda Jungwirth ,&nbsp;Paula Fontana ,&nbsp;Cristian Weigandt ,&nbsp;Patricia L. Fernández ,&nbsp;Melisa Altina ,&nbsp;Leandro D. Guerrero ,&nbsp;Rodrigo Pontiggia ,&nbsp;Leonardo Erijman","doi":"10.1016/j.ejsobi.2025.103709","DOIUrl":"10.1016/j.ejsobi.2025.103709","url":null,"abstract":"<div><div>Biosolids can be blended with edaphic components to formulate customized soil mixes (Technosols), where specific nutrient levels, moisture content, and other factors are tailored to support plant growth. The aim of this work was to evaluate constructed Technosols regarding specific physical, rheological, and biochemical characteristics, as well as for their ability to meet the growth requirements of rye grass. Soil horizons A and C, and quarry waste, were examined both individually as controls and in binary combinations with biosolids, maintaining a ratio of 70:30 in a replicated pot experiment. After 35 days, half of the pots were seeded with ryegrass (<em>Lolium perenne</em> ssp). After 3,5 months, the following physical, chemical, and rheological properties were measured: bulk density; plastic limit; liquid limit; saturated hydraulic conductivity; aggregate stability, organic matter and total Kjeldahl nitrogen. Enzyme activities were determined using fluorogenic substrates, whereas total bacterial and fungal composition was assessed through qPCR and amplicon sequencing using respectively 16S rRNA gene and ITS gene primers. Biosolids-based Technosols exhibited soil-like behavior across various examined variables, such as aggregate stability, microbial community composition and the yield of harvested plant biomass. Changes in the physical and chemical characteristics of mixtures containing biosolids were accompanied by corresponding changes in enzyme activities, as well as by shifts in absolute bacterial and fungal abundance. Biosolid-based Technosols possess the capability to establish sustainable and effective aggregation conditions, maintaining satisfactory water retention levels, and fostering favorable microbiological and biochemical conditions to fulfill essential soil functions, including biomass production.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"124 ","pages":"Article 103709"},"PeriodicalIF":3.7,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143153811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
European Journal of Soil Biology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1