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MoJMJD6, a Nuclear Protein, Regulates Conidial Germination and Appressorium Formation at the Early Stage of Pathogenesis in Magnaporthe oryzae. MoJMJD6是一种核蛋白,在水稻大孔霉发病早期调控分生孢子萌发和附着胞形成。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-08-01 DOI: 10.5423/PPJ.OA.12.2022.0161
Li Zhang, Dong Li, Min Lu, Zechi Wu, Chaotian Liu, Yingying Shi, Mengyu Zhang, Zhangjie Nan, Weixiang Wang

In plant-pathogen interactions, Magnaporthe oryzae causes blast disease on more than 50 species of 14 monocot plants, including important crops such as rice, millet, and most 15 recently wheat. M. oryzae is a model fungus for studying plant-microbe interaction, and the main source for fungal pathogenesis in the field. Here we report that MoJMJD6 is required for conidium germination and appressorium formation in M. oryzae. We obtained MoJMJD6 mutants (ΔMojmjd6) using a target gene replacement strategy. The MoJMD6 deletion mutants were delayed for conidium germination, glycogen, and lipid droplets utilization and consequently had decreased virulence. In the ΔMojmjd6 null mutants, global histone methyltransferase modifications (H3K4me3, H3K9me3, H3K27me3, and H3K36me2/3) of the genome were unaffected. Taken together, our results indicated that MoJMJD6 function as a nuclear protein which plays an important role in conidium germination and appressorium formation in the M. oryzae. Our work provides insights into MoJMJD6-mediated regulation in the early stage of pathogenesis in plant fungi.

在植物与病原体的相互作用中,稻瘟病菌引起14种单子叶植物的50多种稻瘟病,包括水稻、小米和最近的15种小麦等重要作物。M. oryzae是研究植物与微生物相互作用的模式真菌,也是该领域真菌发病机制的主要来源。本文报道了m.o ryzae分生孢子萌发和附着胞形成所需的MoJMJD6基因。我们使用靶基因替换策略获得了MoJMJD6突变体(ΔMojmjd6)。MoJMD6缺失突变体的分生孢子萌发、糖原和脂滴利用延迟,因此毒力降低。在ΔMojmjd6零突变体中,基因组的全局组蛋白甲基转移酶修饰(H3K4me3, H3K9me3, H3K27me3和H3K36me2/3)不受影响。综上所述,我们的研究结果表明,MoJMJD6作为核蛋白在m.o ryzae分生孢子萌发和附着胞形成中起重要作用。我们的工作为植物真菌发病早期mojmjd6介导的调控提供了见解。
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引用次数: 0
Re-identification of Colletotrichum acutatum Species Complex in Korea and Their Host Plants. 韩国炭疽菌种复合体及其寄主植物的再鉴定。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-08-01 DOI: 10.5423/PPJ.OA.05.2023.0078
Le Dinh Thao, Hyorim Choi, Yunhee Choi, Anbazhagan Mageswari, Daseul Lee, Seung-Beom Hong

Colletotrichum acutatum species complex is one of the most important groups in the genus Colletotrichum with a high species diversity and a wide range of host plants. C. acutatum and related species have been collected from different plants and locations in Korea and deposited into the Korean Agricultural Culture Collection (KACC), National Institute of Agricultural Sciences since the 1990s. These fungal isolates were previously identified based mainly on morphological characteristics, and a limitation of molecular data was provided. To confirm the identification of species, 64 C. acutatum species complex isolates in KACC were used in this study for DNA sequence analyses of six loci: nuclear ribosomal internal transcribed spacers (ITS), betatubulin 2 (TUB2), histone-3 (HIS3), glyceraldehyde3-phosphate dehydrogenase (GAPDH), chitin synthase 1 (CHS-1), and actin (ACT). The molecular analysis revealed that they were identified in six different species of C. fioriniae (24 isolates), C. nymphaeae (21 isolates), C. scovillei (12 isolates), C. chrysanthemi (three isolates), C. lupini (two isolates), and C. godetiae (one isolate), and a novel species candidate. We compared the hosts of KACC isolates with "The List of Plant Diseases in Korea", previous reports in Korea and global reports and found that 23 combinations between hosts and pathogens could be newly reported in Korea after pathogenicity tests, and 12 of these have not been recorded in the world.

炭疽病菌(Colletotrichum acutatum)是炭疽病菌属(Colletotrichum acutatum)中最重要的类群之一,物种多样性高,寄主植物广泛。自20世纪90年代以来,在韩国不同的植物和地点收集了尖头草和相关物种,并保存在国立农业科学院韩国农业文化收藏(KACC)中。这些真菌分离物以前主要基于形态特征进行鉴定,并且提供了分子数据的局限性。为了确认物种的鉴定,本研究利用64株KACC地区的尖突菌种复合体分离株,对核糖体内转录间隔物(ITS)、β - bulin 2 (TUB2)、组蛋白-3 (HIS3)、甘油醛-3 -磷酸脱氢酶(GAPDH)、几丁质合成酶1 (CHS-1)和肌动蛋白(ACT) 6个位点进行了DNA序列分析。分子分析结果表明,它们分别在6个不同种中被鉴定出,分别为:C. fioriniae(24株)、C. nymphaeae(21株)、C. scovillei(12株)、C.菊花(3株)、C. lupini(2株)和C. godetiae(1株),以及一个新的候选种。我们将KACC分离物的寄主与《韩国植物病害名录》、国内已有报道及国际报道进行比较,发现经致病性检测,国内可新报道的寄主与病原菌组合有23种,其中12种为世界未见记录。
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引用次数: 0
Occurrence of Faba Bean Diseases and Determinants of Faba Bean Gall (Physoderma sp.) Epidemics in Ethiopia. 埃塞俄比亚蚕豆病的发生及蚕豆瘿病流行的决定因素
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-08-01 DOI: 10.5423/PPJ.OA.03.2023.0040
Tekalign Zeleke, Bereket Ali, Asenakech Tekalign, Gudisa Hailu, M J Barbetti, Alemayehu Ayele, Tajudin Aliyi, Alemu Ayele, Abadi Kahsay, Belachew Tiruneh, Fekadu Tewolde

Physoderma fungal species cause faba bean gall (FBG) which devastates faba bean (Vicia faba L.) in the Ethiopian highlands. In three regions (Amahara, Oromia, and Tigray), the relative importance, distribution, intensity, and association with factors affecting FBG damage were assessed for the 2019 (283 fields) and 2020 (716 fields) main cropping seasons. A logistic regression model was used to associate biophysical factors with FBG incidence and severity. Amhara region has the highest prevalence of FBG (95.7%), followed by Tigray (83.3%), and the Oromia region (54%). Maximum FBG incidence (78.1%) and severity (32.8%) were recorded from Amhara and Tigray areas, respectively. The chocolate spot was most prevalent in West Shewa, Finfinne Special Zone, and North Shewa of the Oromia region. Ascochyta blight was found prevalent in North Shewa, West Shewa, Southwest Shewa of Oromia, and the South Gondar of Amhara. Faba bean rust was detected in all zones except for the South Gonder and North Shewa, and root rot disease was detected in all zones except South Gonder, South Wollo, and North Shewa of Amahara. Crop growth stage, cropping system, altitude, weed density, and fungicide, were all found to affect the incidence and severity of the FBG. Podding and maturity stage, mono-cropping, altitude (>2,400), high weed density, and non-fungicide were found associated with increased disease intensities. However, crop rotation, low weed infestation, and fungicide usage were identified as potential management options to reduce FBG disease.

在埃塞俄比亚高地,植皮真菌引起蚕豆瘿(FBG),它破坏蚕豆(Vicia faba L.)。在3个地区(天原、奥罗米亚和提格雷),评估了2019年(283块田)和2020年(716块田)主要种植季FBG损害的相对重要性、分布、强度及其与影响因素的关联。使用逻辑回归模型将生物物理因素与FBG发生率和严重程度联系起来。阿姆哈拉地区FBG患病率最高(95.7%),其次是提格雷地区(83.3%)和奥罗米亚地区(54%)。阿姆哈拉和提格雷地区FBG发病率最高(78.1%),严重程度最高(32.8%)。巧克力斑点在奥罗米亚地区的西谢瓦、芬芬特区和北谢瓦最为普遍。在奥罗米亚的北谢瓦、西谢瓦、西南谢瓦和阿姆哈拉的南贡达尔发现了阿斯科奇塔疫病。蚕豆锈病除南冈德、北舍瓦区外,其余区均有发现;根腐病除南冈德、南沃罗、北舍瓦区外,其余区均有发现。作物生育期、种植制度、海拔高度、杂草密度和杀菌剂均影响FBG的发生和严重程度。发现豆荚和成熟期、单作、海拔(> 2400)、高杂草密度和不使用杀菌剂与病害强度增加有关。然而,轮作、低杂草侵染和使用杀菌剂被确定为减少FBG疾病的潜在管理选择。
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引用次数: 0
Variations in Kiwifruit Microbiota across Cultivars and Tissues during Developmental Stages. 猕猴桃发育阶段不同品种和组织微生物群的变化。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.5423/PPJ.OA.03.2023.0038
Su-Hyeon Kim, Da-Ran Kim, Youn-Sig Kwak

The plant microbiota plays a crucial role in promoting plant health by facilitating the nutrient acquisition, abiotic stress tolerance, biotic stress resilience, and host immune regulation. Despite decades of research efforts, the precise relationship and function between plants and microorganisms remain unclear. Kiwifruit (Actinidia spp.) is a widely cultivated horticultural crop known for its high vitamin C, potassium, and phytochemical content. In this study, we investigated the microbial communities of kiwifruit across different cultivars (cvs. Deliwoong and Sweetgold) and tissues at various developmental stages. Our results showed that the microbiota community similarity was confirmed between the cultivars using principal coordinates analysis. Network analysis using both degree and eigenvector centrality indicated similar network forms between the cultivars. Furthermore, Streptomycetaceae was identified in the endosphere of cv. Deliwoong by analyzing amplicon sequence variants corresponding to tissues with an eigenvector centrality value of 0.6 or higher. Our findings provide a foundation for maintaining kiwifruit health through the analysis of its microbial community.

植物微生物群通过促进植物营养获取、非生物胁迫耐受性、生物胁迫恢复力和宿主免疫调节等,在促进植物健康方面起着至关重要的作用。尽管经过了几十年的研究,植物和微生物之间的确切关系和功能仍不清楚。猕猴桃(Actinidia spp.)是一种广泛种植的园艺作物,以其高维生素C,钾和植物化学成分含量而闻名。本研究对猕猴桃不同品种的微生物群落进行了研究。Deliwoong和Sweetgold)和不同发育阶段的组织。结果表明,利用主坐标分析证实了品种间微生物群落的相似性。利用度中心性和特征向量中心性进行的网络分析表明,品种间的网络形式相似。此外,还鉴定出了链霉菌科。通过分析特征向量中心性值为0.6或更高的组织对应的扩增子序列变异。通过对猕猴桃微生物群落的分析,为维持猕猴桃的健康提供了基础。
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引用次数: 0
Proteomic and Phenotypic Analyses of a Putative YggS Family Pyridoxal Phosphate-Dependent Enzyme in Acidovorax citrulli. 瓜梨YggS家族吡哆醛磷酸依赖酶的蛋白质组学和表型分析。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.5423/PPJ.OA.03.2023.0050
Lynn Heo, Yongmin Cho, Junhyeok Choi, Jeongwook Lee, Yoobin Han, Sang-Wook Han

Acidovorax citrulli (Ac) is a phytopathogenic bacterium that causes bacterial fruit blotch (BFB) in cucurbit crops, including watermelon. However, there are no effective methods to control this disease. YggS family pyridoxal phosphate-dependent enzyme acts as a coenzyme in all transamination reactions, but its function in Ac is poorly understood. Therefore, this study uses proteomic and phenotypic analyses to characterize the functions. The Ac strain lacking the YggS family pyridoxal phosphate-dependent enzyme, AcΔyppAc(EV), virulence was wholly eradicated in geminated seed inoculation and leaf infiltration. AcΔyppAc(EV) propagation was inhibited when exposed to L-homoserine but not pyridoxine. Wild-type and mutant growth were comparable in the liquid media but not in the solid media in the minimal condition. The comparative proteomic analysis revealed that YppAc is primarily involved in cell motility and wall/membrane/envelop biogenesis. In addition, AcΔyppAc(EV) reduced biofilm formation and twitching halo production, indicating that YppAc is involved in various cellular mechanisms and possesses pleiotropic effects. Therefore, this identified protein is a potential target for developing an efficient anti-virulence reagent to control BFB.

Acidovorax citrulli (Ac)是一种引起瓜类作物细菌性水果斑病(BFB)的植物致病菌,包括西瓜。然而,目前还没有有效的方法来控制这种疾病。YggS家族吡哆醛磷酸依赖酶在所有转氨化反应中都是辅酶,但其在Ac中的功能尚不清楚。因此,本研究使用蛋白质组学和表型分析来表征其功能。缺乏YggS家族吡哆醛磷酸酯依赖酶AcΔyppAc(EV)的Ac菌株在萌发种子接种和叶片浸渍中完全消除了毒力。当暴露于l -同型丝氨酸而不是吡哆醇时,AcΔyppAc(EV)的繁殖受到抑制。在最小条件下,野生型和突变型在液体培养基上的生长具有可比性,而在固体培养基上则无可比性。比较蛋白质组学分析显示,YppAc主要参与细胞运动和壁/膜/包膜生物发生。此外,AcΔyppAc(EV)减少了生物膜的形成和抽搐晕的产生,表明YppAc参与多种细胞机制并具有多效性。因此,该蛋白是开发有效的抗毒试剂控制BFB的潜在靶点。
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引用次数: 1
Antifungal Activity of Green and Chemically Synthesized ZnO Nanoparticles against Alternaria citri, the Causal Agent Citrus Black Rot. 绿色和化学合成氧化锌纳米颗粒对柑桔黑腐病病原菌柑橘交替病菌的抑菌活性研究。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.5423/PPJ.OA.02.2023.0035
Hazem S Elshafie, Ali Osman, Mahmoud M El-Saber, Ippolito Camele, Entsar Abbas

Citrus black rot is a serious disease of citrus plants caused by Alternaria citri. The current study aimed to synthesize zinc oxide nanoparticles (ZnO-NPs) by chemically or green method and investigate their antifungal activity against A. citri. The sizes of synthesized as measured by transmission electron microscope of ZnO-NPs were 88 and 65 nm for chemical and green methods, respectively. The studied prepared ZnO-NPs were applied, in vitro and in situ, at different concentrations (500, 1,000, and 2,000 µg/ml) in post-harvest treatment on navel orange fruits to verify the possible control effect against A. citri. Results of in vitro assay demonstrated that, at concentration 2,000 µg/ml, the green ZnO-NPs was able to inhibit about 61% of the fungal growth followed by 52% of chemical ZnO-NPs. In addition, scanning electron microscopy of A. citri treated in vitro with green ZnO-NPs showed swelling and deformation of conidia. Results showed also that, using a chemically and green ZnO-NPs at 2,000 µg/ml in situ in post-harvest treatment of orange, artificially-infected with A. citri, has reduced the disease severity to 6.92% and 9.23%, respectively, compared to 23.84% of positive control (non-treated fruits) after 20 days of storage. The out findings of this study may contribute to the development of a natural, effective, and eco-friendly strategy for eradicating harmful phytopathogenic fungi.

柑桔黑腐病是由柑桔互交菌引起的柑桔严重病害。本研究旨在通过化学和绿色两种方法合成氧化锌纳米颗粒(ZnO-NPs),并研究其对柑橘的抗真菌活性。化学法和绿色法合成的ZnO-NPs的透射电镜尺寸分别为88 nm和65 nm。将制备的ZnO-NPs以不同浓度(500、1000和2000µg/ml)在采后处理脐橙果实,验证其对柑橘蚜的防治效果。体外实验结果表明,在浓度为2000µg/ml时,绿色ZnO-NPs能够抑制约61%的真菌生长,其次是化学ZnO-NPs能够抑制52%的真菌生长。此外,用绿色ZnO-NPs处理的柑桔体外扫描电镜显示分生孢子肿胀和变形。结果还表明,在柑桔人工侵染后采后,原位使用浓度为2000µg/ml的化学ZnO-NPs和绿色ZnO-NPs,贮藏20 d后,柑桔病的严重程度分别降低到6.92%和9.23%,而阳性对照(未处理的果实)的严重程度为23.84%。我们的研究结果可能有助于开发一种自然、有效、环保的方法来根除有害的植物病原真菌。
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引用次数: 0
Identification and Characterization of Diplodia parva and Diplodia crataegicola Causing Black Rot of Chinese Quince. 引起太子黑腐病的小双plodia和大黄双plodia的鉴定与鉴定。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.5423/PPJ.OA.03.2023.0039
Sungmun Kwon, Jungyeon Kim, Younmi Lee, Kotnala Balaraju, Yongho Jeon

Fungal isolates from infected Chinese quince trees were found to cause black rot in Yeongcheon, Gyeongsangbuk Province, Korea. The quince leaves withered and turned reddish-brown and fruits underwent black mummification. To elucidate the cause of these symptoms, the pathogen was isolated from infected leaf and fruit tissues on potato dextrose agar and Levan media. Several fungal colonies forming a fluffy white or dark gray mycelium and two types of fungi forming an aerial white mycelium, growing widely at the edges, were isolated. Microscopic observations, investigation of fungal growth characteristics on various media, and molecular identification using an internal transcribed spacer, β-tubulin, and translation elongation factor 1-α genes were performed. The fungal pathogens were identified as Diplodia parva and Diplodia crataegicola. Pathogenicity tests revealed that the pathogen-inoculated fruits exhibited a layered pattern, turning brown rotting; leaves showed circular brown necrotic lesions. The developed symptoms were similar to those observed in the field. Fungal pathogens were reisolated to fulfill Koch's postulates. Apples were inoculated with fungal pathogens to investigate the host range. Strong pathogenicity was evident in the fruits, with browning and rotting symptoms 3 days after inoculation. To determine pathogen control, a fungicidal sensitivity test was conducted using four registered fungicides. Thiophanate-methyl, propineb, and tebuconazole inhibited the mycelial growth of pathogens. To the best of our knowledge, this is the first report on the isolation and identification of the fungal pathogens D. parva and D. crataegicola from infected fruits and leaves of Chinese quince, causing black rot disease in Korea.

在韩国庆尚北道永川市发现了从感染的中国榅桲树上分离出的真菌引起的黑腐病。木瓜的叶子枯萎了,变成了红褐色,果实变成了黑色的木乃伊。为了阐明这些症状的原因,在马铃薯葡萄糖琼脂和Levan培养基上从受感染的叶片和果实组织中分离出病原菌。几个真菌菌落形成蓬松的白色或深灰色菌丝,两种真菌形成空中白色菌丝,在边缘广泛生长。显微镜下观察,研究真菌在不同培养基上的生长特性,并利用内部转录间隔物、β-微管蛋白和翻译伸长因子1-α基因进行分子鉴定。病原真菌鉴定为细小双plodia parva和双plodia crataegicola。致病性试验表明,接种病菌的果实呈层状,呈褐腐;叶片呈圆形棕色坏死灶。出现的症状与现场观察到的症状相似。真菌病原体被重新分离,以满足科赫的假设。用真菌病原菌对苹果进行接种,研究其寄主范围。果实致病性强,接种后3 d出现褐变和腐烂症状。为了确定病原菌的防治效果,用4种已登记的杀菌剂进行了杀真菌敏感性试验。噻吩酸甲酯、丙泊尼和戊康唑抑制病原菌菌丝生长。据我们所知,这是国内首次从引起黑腐病的中国榅桲果实和叶片中分离鉴定出真菌病原菌D. parva和D. crataegicola。
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引用次数: 0
The Potency of Abamectin Formulations against the Pine Wood Nematode, Bursaphelenchus xylophilus. 阿维菌素制剂对松材线虫的防效研究。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.5423/PPJ.OA.02.2023.0023
Jong-Won Lee, Abraham Okki Mwamula, Jae-Hyuk Choi, Ho-Wook Lee, Yi Seul Lee, Jin-Hyo Kim, Dong Woon Lee

Abamectin offers great protection against Bursaphelenchus xylophilus, a well-known devastating pathogen of pine tree stands. Trunk injection of nematicides is currently the most preferred method of control. This study aimed to evaluate the potency of the commonly used formulations of abamectin against B. xylophilus. Twenty-one formulations of abamectin were evaluated by comparing their sublethal toxicities and reproduction inhibition potentials against B. xylophilus. Nematodes were treated with diluted formulation concentrations in multi-well culture plates. And, populations pre-exposed to pre-determined concentrations of the formulations were inoculated onto Botrytis cinerea culture, and in pine twig cuttings. Potency was contrastingly different among formulations, with LC95 of 0.00285 and 0.39462 mg/ml for the most, and the least potent formulation, respectively. Paralysis generally occurred at an application dose of 0.06 μg/ml or higher, and formulations with high sublethal toxicities caused significant paralysis levels at the tested doses, albeit the variations. Nematode reproduction was evident at lower doses of 0.00053-0.0006 μg/ml both on Botrytis cinerea and pine twigs, with significant variations among formulations. Thus, the study highlighted the inconsistencies in the potency of similar product formulations with the same active ingredient concentration against the target organism, and the need to analyze the potential antagonistic effects of the additives used in formulations.

阿维菌素对一种众所周知的破坏松树林的病原菌——木腐菌有很好的保护作用。树干注射杀线虫剂是目前最常用的防治方法。本研究旨在评价常用的阿维菌素制剂对嗜木杆菌的药效。比较了21种阿维菌素制剂对嗜木杆菌的亚致死毒性和繁殖抑制潜力。线虫用稀释的制剂浓度在多孔培养板上处理。并且,将预先暴露于预先确定浓度的制剂的群体接种到灰葡萄球菌培养物和松枝插枝上。效价差异较大,效价最高的LC95为0.00285 mg/ml,效价最低的LC95为0.39462 mg/ml。通常在0.06 μg/ml或更高的应用剂量时发生麻痹,具有高亚致死毒性的制剂在测试剂量下引起显著的麻痹水平,尽管存在差异。在0.00053 ~ 0.0006 μg/ml较低剂量下,线虫在灰霉病菌和松枝上均有明显繁殖,各制剂间差异显著。因此,该研究强调了具有相同活性成分浓度的类似产品配方对目标生物体的效力的不一致性,以及分析配方中使用的添加剂的潜在拮抗作用的必要性。
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引用次数: 0
Construction of an Agroinfectious Clone of a Korean Isolate of Sweet Potato Symptomless Virus 1 and Comparison of Its Infectivity According to Agrobacterium tumefaciens Strains in Nicotiana benthamiana. 甘薯无症状病毒1号韩国分离株农染性克隆的构建及其与本菌烟中农染性的比较
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.5423/PPJ.OA.12.2022.0168
Phuong T Ho, Hee-Seong Byun, Thuy T B Vo, Aamir Lal, Sukchan Lee, Eui-Joon Kil

Sweet potato symptomless virus 1 (SPSMV-1) is a single-stranded circular DNA virus, belonging to the genus Mastrevirus (family Geminiviridae) that was first identified on sweet potato plants in South Korea in 2012. Although SPSMV-1 does not induce distinct symptoms in sweet potato plants, its co-infection with different sweet potato viruses is highly prevalent, and thus threatens sweet potato production in South Korea. In this study, the complete genome sequence of a Korean isolate of SPSMV-1 was obtained by Sanger sequencing of polymerase chain reaction (PCR) amplicons from sweet potato plants collected in the field (Suwon). An infectious clone of SPSMV-1 (1.1-mer) was constructed, cloned into the plant expression vector pCAMBIA1303, and agro-inoculated into Nicotiana benthamiana using three Agrobacterium tumefaciens strains (GV3101, LBA4404, and EHA105). Although no visual differences were observed between the mock and infected groups, SPSMV-1 accumulation was detected in the roots, stems, and newly produced leaves through PCR. The A. tumefaciens strain LBA4404 was the most effective at transferring the SPSMV-1 genome to N. benthamiana. We confirmed the viral replication in N. benthamiana samples through strand-specific amplification using virion-sense- and complementary-sense-specific primer sets.

甘薯无症状病毒1 (SPSMV-1)是一种单链环状DNA病毒,属于双病毒科Mastrevirus属,于2012年首次在韩国的甘薯植物上发现。虽然SPSMV-1在甘薯植株中不会引起明显的症状,但它与不同甘薯病毒的共同感染非常普遍,从而威胁到韩国的甘薯生产。本研究采用Sanger测序方法,对在水原地区采集的甘薯植株进行PCR扩增,获得了SPSMV-1韩国分离株的全基因组序列。构建SPSMV-1侵染克隆(1.1-mer),将其克隆到植物表达载体pCAMBIA1303中,利用3株农杆菌(GV3101、LBA4404和EHA105)接种到本烟中。虽然在模拟组和感染组之间没有观察到视觉上的差异,但通过PCR检测到SPSMV-1在根、茎和新产生的叶片中积累。在将SPSMV-1基因组转移到benthamiana上,产瘤杆菌菌株LBA4404最有效。我们通过使用病毒粒子感和互补感特异性引物组进行链特异性扩增,证实了病毒在benthamiana样品中的复制。
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引用次数: 0
Rapid Identification of Jasmine Virus H Infecting Ixora coccinea by Nanopore Metatranscriptomics. 利用纳米孔超转录组学快速鉴定感染瓢虫的茉莉病毒H。
IF 2.3 3区 农林科学 Q2 Agricultural and Biological Sciences Pub Date : 2023-06-01 DOI: 10.5423/PPJ.NT.03.2023.0037
Sung-Woong Kim, Hyo-Jeong Lee, Sena Choi, In-Sook Cho, Rae-Dong Jeong

The global climate change and international trade have facilitated the movement of plants across borders, increasing the risk of introducing novel plant viruses in new territories. Ixora coccinea exhibited virus-like foliar symptoms, including mosaic and mild mottle. An Oxford Nanopore Technologies-based compact and portable MinION platform was used to identify the causal viral pathogen. The complete genome sequence of jasmine virus H (JaVH; 3867 nt, JaVH-CNU) was determined and found to share 88.4-90.3% nucleotide identity with that of Jasminum sambac JaVH isolate in China. Phylogenetic analysis based on the complete amino acid sequences of RNA-dependent RNA polymerase and coat protein revealed that JaVH-CNU was grouped separately with other JaVH isolates. This is the first report of a natural JaVH infection of >i<I. coccinea. The application of rapid nanopore sequencing for plant virus identification was demonstrated and is expected to provide accurate and rapid diagnosis for virus surveillance.

全球气候变化和国际贸易促进了植物的跨境流动,增加了在新领土引入新型植物病毒的风险。球虫表现出病毒样叶面症状,包括花叶和轻度斑驳。使用基于牛津纳米孔技术的紧凑便携式MinION平台来鉴定致病病毒病原体。茉莉病毒H (JaVH)全基因组序列;3867nt, JaVH- cnu)与中国Jasminum sambac JaVH分离株的核苷酸同源性为88.4-90.3%。基于RNA依赖性RNA聚合酶和外壳蛋白全氨基酸序列的系统发育分析表明,JaVH- cnu与其他JaVH分离株是单独类群的。这是首次报告的甲型h1n1流感自然感染病例。coccinea。快速纳米孔测序技术在植物病毒鉴定中的应用,有望为病毒监测提供准确、快速的诊断。
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引用次数: 0
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Plant Pathology Journal
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