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An arbuscular mycorrhiza from the 407-million-year-old Windyfield Chert identified through advanced fluorescence and Raman imaging 通过先进的荧光和拉曼成像技术,从4.07亿年前的winddyfield Chert中发现了一个丛枝菌根。
IF 8.1 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-12 DOI: 10.1111/nph.70655
Christine Strullu-Derrien, Raymond Wightman, Liam Patrick McDonnell, Gareth Evans, Frédéric A. Fercoq, Paul Kenrick, Andrea C. Ferrari, Sebastian Schornack

真菌和植物之间的菌根联系是陆地生态系统的一个基本方面。菌根存在于约85%的现存植物中,但它们的地质记录却很少。来自早期陆地环境的罕见化石证据为这些古老的共生关系提供了重要的见解,但在植物组织的微观尺度上可视化化石真菌是具有挑战性的。在这里,我们结合共聚焦激光扫描显微镜和荧光寿命成像显微镜(FLIM)研究了一种新发现的真菌和407 myr -old的植物,来自Windyfield Chert,一个地层上独特的化石单元来自Rhynie(苏格兰)。我们还应用拉曼光谱研究了真菌和植物组织的碳结构。这种综合方法以前所未有的细节揭示了真菌的结构。这种真菌,Rugososporomyces lavoisierae gen. nov., sp. nov.,表现出与现存的丛枝菌根真菌相似的特征。这是第一次记录的菌根从温迪菲尔德燧石。FLIM进一步在亚细胞水平上区分了特征,而拉曼光谱显示真菌丛枝和植物导水细胞的囊泡经历了地质变化,导致化学成分相似。这些发现扩大了我们对古代和极其罕见的植物-真菌共生的理解,并突出了共聚焦- flim在推进古植物学研究方面的潜力。
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引用次数: 0
Tuning the C4 supercharger: improving photosynthesis and yield in C4 crops 调整c4增压器:提高c4作物的光合作用和产量
IF 8.1 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-12 DOI: 10.1111/nph.70692
Maria Ermakova, Robert E. Sharwood, Robert T. Furbank

C4 crops such as maize and sorghum are vital to global food and bioenergy systems due to their high productivity and resource use efficiency, underpinned by a CO2 concentrating mechanism. Despite this advantage, modelling and experimental evidence indicate that C4 photosynthesis can be further optimised to boost yield and carbon capture. This review examines key metabolic and physiological processes predicted to limit C4 photosynthetic flux by the steady-state and dynamic models, including the activity of carboxylases, electron transport, and mesophyll and bundle sheath (BS) conductance. We highlight recent progress using Setaria viridis and model crops to test genetic strategies for alleviating these limitations. In addition, we explore promising but less-understood areas, such as enhancing light-harvesting and adenosine triphosphate (ATP) generation in BS cells, improving metabolite exchange and activating alternative decarboxylation pathways under stress. We suggest that improving C4 photosynthesis will require coordinated manipulation of multiple biochemical and regulatory processes. Advancing our understanding of these processes will not only enhance C4 crop productivity and resilience but also support long-term goals of engineering C4 traits into C3 crops to address rising demands for food, energy, and climate adaptation.

玉米和高粱等c4作物因其高生产力和资源利用效率以及二氧化碳浓缩机制而对全球粮食和生物能源系统至关重要。尽管有这种优势,但模型和实验证据表明,c4光合作用可以进一步优化,以提高产量和碳捕获。本文综述了通过稳态和动态模型预测的限制c4光合通量的关键代谢和生理过程,包括羧化酶活性、电子传递、叶肉和束鞘(BS)电导。我们强调了最近使用狗尾草和模型作物来测试减轻这些限制的遗传策略的进展。此外,我们还探索了有前景但鲜为人知的领域,如增强BS细胞的光收集和三磷酸腺苷(ATP)生成,改善代谢产物交换和激活应激下的替代脱羧途径。我们认为,改善c4光合作用需要多种生化和调控过程的协调操纵。推进我们对这些过程的理解不仅将提高c4作物的生产力和抗灾能力,而且还将支持将c4性状改造成c3作物的长期目标,以满足对粮食、能源和气候适应不断增长的需求。
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引用次数: 0
Chromosome‐level genome assembly of the photobiont microalga Trebouxia sp. ‘ A48 ’ from the lichen Xanthoria parietina 来自顶黄原地衣的光生物微藻Trebouxia sp. ‘ A48 ’的染色体水平基因组组装
IF 9.4 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-11 DOI: 10.1111/nph.70728
Gulnara Tagirdzhanova, Jasper Raistrick, Nicholas J. Talbot
Summary Lichens are symbiotic assemblies consisting of multiple organisms, chiefly a fungus and a photosynthetic microorganism, or photobiont. Among diverse photobionts, the most prevalent is the chlorophyte alga Trebouxia . We produced a chromosome‐level assembly of Trebouxia sp. ‘A48’, a photobiont of Xanthoria parietina . The genome was assembled into 20 contigs, of which 16 had telomeric repeats at both ends and likely represent complete chromosomes. We compared this genome with those of other Trebouxia species and analyzed it to investigate adaptations to the lichen lifestyle. We then used the genome to profile gene expression in axenic culture and in lichen thalli. The predicted secretome is enriched in hydrolases and redox enzymes and contains carbohydrate‐binding proteins potentially involved in cell‐to‐cell recognition and adhesion. We identified genes potentially involved in carbon concentrating and confirmed two instances of ancient horizontal gene transfer from fungi. The genome and the strain of Trebouxia sp. ‘A48’ provide a resource for the community to research algal evolution and lichen symbiosis.
地衣是由多种生物组成的共生组合,主要是真菌和光合微生物,或光生物。在各种光生物中,最普遍的是绿藻翠藻。我们获得了顶黄菌(Xanthoria parietina)的光生物Trebouxia sp. ‘ A48 ’的染色体水平组装体。基因组被组装成20个contigs,其中16个在两端都有端粒重复,可能代表完整的染色体。我们将这个基因组与其他Trebouxia物种的基因组进行了比较,并分析了它对地衣生活方式的适应性。然后,我们使用基因组来分析基因在无性系培养和地衣菌体中的表达。预测的分泌组富含水解酶和氧化还原酶,并含有可能参与细胞间识别和粘附的碳水化合物结合蛋白。我们发现了可能参与碳浓缩的基因,并证实了真菌古代水平基因转移的两个实例。Trebouxia sp. ‘ A48 ’的基因组和菌株为该群落研究藻类进化和地衣共生提供了资源。
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引用次数: 0
Extensive photophysiological variation in wild barley is linked to environmental origin 野生大麦广泛的光生理变异与环境起源有关
IF 8.1 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-11 DOI: 10.1111/nph.70659
Matthieu Breil-Aubert, Katie Shaw, Jessica Royles, Cristina R. G. Sales, Julia Walter, Georgia Taylor, Richard L. Vath, Eyal Bdolach, Lalit D. Tiwari, Jyotirmaya Mathan, Tracy Lawson, Eyal Fridman, Johannes Kromdijk, John N. Ferguson

利用来自B1K多样性收集的320份资料,我们揭示了光饱和光合作用、光保护和PSII量子产率对动态辐照的响应和光饱和光合作用的限制等性状之间广泛的遗传变异。我们提供的证据表明,这种差异部分是由于不同亚群对不同光生理特性的差异选择的结果。具体来说,我们强调了gs如何在促进当地适应干旱环境方面发挥关键作用。更广泛地说,这项研究表明,野生大麦存在广泛的光合作用变化,其中一些变化可能比驯化大麦更大(Gao et al., 2024)。
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引用次数: 0
Legacies of model initialization on predictions of future ecosystem dynamics in California's Sierra Nevada: insights from GEDI 模型初始化对加州内华达山脉未来生态系统动态预测的影响:来自GEDI的见解。
IF 8.1 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-11 DOI: 10.1111/nph.70657
Li-Ling Chang, Shaoqing Liu, Alexander S. Antonarakis, Marcos Longo, Hao Tang, John David Armston, Ralph Dubayah, Paul Moorcroft

  • Accurate estimates of aboveground vegetation structure are essential for making reliable predictions of terrestrial ecosystem responses to climate change. However, traditional small-scale ground-based inventory methods cannot easily be scaled up to comprehensive, large-scale estimates of ecosystem structure.
  • We assimilate remotely-sensed Light Detection and Ranging measurements of vegetation structure and corresponding imaging-spectrometry-derived estimates of canopy composition into the ecosystem demography (ED2.2) terrestrial biosphere model across an elevational transect in California's Sierra Nevada. We then used the model to assess: how incorporating observed ecosystem structure and composition influences predictions of ecosystem change over the coming century as compared to simulations initialized with long-term potential vegetation; and how ecosystems are predicted to respond differently to future climate change.
  • Our analyses show multi-decadal impacts of initialization on predictions of ecosystem composition and structure, emphasizing long-term legacies of climate and disturbance history in predictions of ecosystem responses to climate change that are not captured when models are initialized with outputs from long-term historical simulations.
  • The remote sensing-initialized simulations predict increases in aboveground biomass and leaf area index, and pronounced elevation-dependent changes in canopy composition. The differences among initialization methods, climate scenarios, and elevational gradients have important implications for improving ecosystem modeling and informing land management strategies.
准确估计地上植被结构对于可靠地预测陆地生态系统对气候变化的反应至关重要。然而,传统的小规模地面调查方法不容易扩大到全面的、大规模的生态系统结构估计。我们将植被结构的遥感光探测和测距测量以及相应的成像光谱法衍生的冠层组成估算纳入加州内华达山脉海拔样带的生态系统人口统计学(ED2.2)陆地生物圈模型。然后,我们使用该模型评估:与以长期潜在植被初始化的模拟相比,纳入观测到的生态系统结构和组成如何影响对未来一个世纪生态系统变化的预测;以及如何预测生态系统对未来气候变化的不同反应。我们的分析显示了初始化对生态系统组成和结构预测的多年代际影响,强调了气候和扰动历史在预测生态系统对气候变化的响应中的长期遗产,而这些在用长期历史模拟的输出初始化模型时没有被捕获。遥感初始化模拟预测地上生物量和叶面积指数的增加,以及冠层组成的显著海拔依赖性变化。初始化方法、气候情景和海拔梯度之间的差异对改善生态系统建模和为土地管理策略提供信息具有重要意义。
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引用次数: 0
Ontogenetic shifts in wood anatomy and leaf traits in tropical dry forests 热带干燥森林木材解剖结构和叶片性状的个体发生变化
IF 9.4 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-11 DOI: 10.1111/nph.70725
Peter J. Williams, Elise F. Zipkin, Andrés González‐Melo, Beatriz Salgado‐Negret, Roy González‐M., Natalia Norden, Juan Pablo Benavides‐Tocarruncho, Juan Manuel Cely, Julio Abad Ferrer, Daniel García‐Villalobos, Fabián Garzón, Álvaro Idárraga‐Piedrahita, René López‐Camacho, Esteban Moreno, Jhon Nieto, Camila Pizano, Juliana Puentes‐Marín, Nancy Pulido, Katherine Rivera, Felipe Rojas‐Bautista, Viviana Salinas, Juan Felipe Solorzano, María Natalia Umaña
Summary Trees experience changes in environmental conditions and biophysical constraints as they grow that may lead to shifts in functional traits. While ontogenetic shifts in leaf traits are relatively well understood, changes in wood anatomy traits from seedlings to adults are less clear, especially in tropical dry forests where drought strongly influences adult wood traits. We collected wood and leaf functional trait data for seedlings and adult trees in four dry forest sites along a rainfall gradient in Colombia. Using a Bayesian framework, we quantified intraspecific trait shifts between seedlings and adults, and we compared functional axes and trait correlations between these stages. Leaf traits shifted along a clear functional axis from more acquisitive seedlings to more conservative adults, but changes in vessel traits were more complicated. Vessel diameter increased across ontogeny as plant height increased. Wood anatomy traits were less tightly coupled for seedlings than for adults, such that the hydraulic safety–efficiency trade‐off observed in adults appeared to be weaker. Our results indicate that wood anatomy traits do not show coordinated ontogenetic shifts among traits because traits associated with hydraulic safety and efficiency are less integrated in seedlings. In dry forests, hydraulic trade‐offs become stronger as trees grow taller.
树木在生长过程中经历了环境条件和生物物理约束的变化,这些变化可能导致功能性状的变化。虽然叶片性状的个体发生变化相对较好理解,但木材解剖性状从幼苗到成虫的变化不太清楚,特别是在干旱强烈影响成虫木材性状的热带干燥森林中。我们收集了哥伦比亚沿降雨梯度的四个干燥森林站点的幼苗和成树的木材和叶片功能性状数据。利用贝叶斯框架,我们量化了幼苗和成虫之间的种内性状变化,并比较了这些阶段之间的功能轴和性状相关性。叶片性状沿着一条清晰的功能轴从更具有获取性的幼苗向更保守的成体转移,但导管性状的变化更为复杂。随着株高的增加,整个个体的管径也增加。与成材相比,树苗的木材解剖性状耦合度较低,因此在成材中观察到的水力安全效率权衡似乎较弱。我们的研究结果表明,木材解剖性状之间没有协调的个体发生变化,因为与水力安全和效率相关的性状在幼苗中整合较少。在干燥的森林中,随着树木长高,水力平衡变得更强。
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引用次数: 0
The optimization of crop response to climatic stress through modulation of plant stress response mechanisms. Opportunities for biostimulants and plant hormones to meet climate challenges. 通过调节植物胁迫响应机制,优化作物对气候胁迫的响应。生物刺激素和植物激素应对气候挑战的机遇。
IF 8.1 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-10 DOI: 10.1111/nph.70701
Jing Li, Giulia Forghieri, Danny Geelen, Patrick du Jardin, Patrick H. Brown

This review discusses the use of agronomic management practices to enhance crop stress resilience to climate stress through the modulation of natural plant growth regulatory pathways. The use of biostimulants or plant hormones to improve crop resilience is subject to strict regulatory oversight if changes in the regulation of plant growth are implied. Climate change is a major threat to crop potential and is characterized by both long-term shifts in temperature and precipitation patterns as well as increased occurrence of extreme weather events, posing an immediate threat to agriculture. Breeding and exogenous inputs have been used to enhance cropping system resilience, although these management practices are either too slow or constrained by cost and availability, to address rapidly emerging climate challenges. Exogenous biostimulants, microbials and plant hormones have shown great promise as novel mechanisms to optimize natural plant resilience, resulting in immediate but non-permanent improvements in plant responses to climate-induced stresses, representing a powerful but underexplored approach to enhance crop productivity under climate stress. The use of these exogenous inputs is, however, constrained by outdated and scientifically unsound regulations that consider any such modification as pesticidal in nature. The failure to modernize regulatory frameworks for the use of biostimulants in agriculture will constrain the development of safe effective tools and deprive growers of means to respond to climate change. Here, we discuss the scientific rationale for eliminating the regulatory barriers governing biostimulants or products that modulate plant regulatory networks and propose a framework for enabling legislation to strengthen cropping system resilience.

本文讨论了利用农艺管理措施通过调节植物生长的自然调控途径来提高作物对气候胁迫的抗逆性。使用生物刺激剂或植物激素来提高作物的抗逆性,如果意味着改变植物生长的调节,则受到严格的监管监督。气候变化是对作物潜力的主要威胁,其特点是温度和降水模式的长期变化以及极端天气事件的增加,对农业构成直接威胁。育种和外源投入已被用于提高种植系统的抗灾能力,尽管这些管理做法要么太慢,要么受到成本和可得性的限制,无法应对迅速出现的气候挑战。外源生物刺激剂、微生物和植物激素作为优化植物自然恢复力的新机制显示出巨大的前景,导致植物对气候诱导胁迫的反应立即但非永久性的改善,代表了在气候胁迫下提高作物生产力的一种强大但尚未得到充分探索的方法。然而,这些外源性投入物的使用受到过时和科学上不健全的法规的限制,这些法规认为任何此类修饰都具有农药性质。在农业中使用生物刺激素的监管框架未能实现现代化,将限制安全有效工具的开发,并剥夺种植者应对气候变化的手段。在这里,我们讨论了消除调节植物调控网络的生物刺激素或产品的监管障碍的科学依据,并提出了一个框架,使立法能够加强种植系统的恢复力。
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引用次数: 0
Weak global trade-off between frost and drought resistance in trees. 树木抗冻性和抗旱性之间的弱全球权衡。
IF 9.4 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-09 DOI: 10.1111/nph.70718
Maximilian Larter,Guillaume Charrier,Sylvain Delzon,William Hammond,Anne Baranger,Constance Bertrand,Nicolas Martin-StPaul,Georges Kunstler
Drought and frost stresses play important roles in determining species distributions, especially at range margins. Understanding how stress resistance traits interact to determine vulnerability to climate change is critical. We developed a large global database of published and new measurements of drought resistance (xylem embolism resistance; P50) and frost resistance (electrolyte leakage; LT50), and investigated evolutionary trade-offs using Bayesian phylogenetic quantile regressions. Across all woody biomes, P50 ranged from -1 to -19 MPa, and LT50 from 0 to below -80°C with conifers generally more resistant than angiosperms. We found a weak trade-off between drought and frost resistance: Drought-resistant species tend to be less frost hardy, and vice versa. There are few species resistant to both stresses (e.g. junipers). Including the phylogeny reduced the strength of the relationship, reflecting the phylogenetic signal for these traits. We did not find any strong effects of LT50 on growth-related traits, but drought resistance is associated with denser wood, smaller conduits, shorter stature and lower specific leaf area. While we show a trade-off between frost and drought resistance, our study does not support the global fast-slow economics spectrum. Our results have implications for forests experiencing hotter, drier summers and potentially damaging late frosts.
干旱和霜冻胁迫在决定物种分布中起着重要作用,特别是在范围边缘。了解抗逆性性状如何相互作用以决定对气候变化的脆弱性是至关重要的。我们开发了一个大型的全球数据库,包括已发表的和新的抗旱性(木质部栓塞性;P50)和抗冻性(电解质泄漏;LT50),并使用贝叶斯系统发育分位数回归研究了进化权衡。所有木本生物群落的P50值在-1 ~ -19 MPa之间,LT50值在0 ~ -80℃以下,针叶树的耐受性普遍高于被子植物。我们发现在抗旱性和抗冻性之间存在一种微弱的权衡:抗旱物种往往不那么耐寒,反之亦然。很少有物种能同时抵抗这两种压力(如杜松)。包括系统发育降低了关系的强度,反映了这些性状的系统发育信号。我们没有发现LT50对生长相关性状有明显影响,但抗旱性与木材密度大、导管小、高度低和比叶面积低有关。虽然我们展示了抗冻性和抗旱性之间的权衡关系,但我们的研究并不支持全球快慢经济谱。我们的研究结果对经历更炎热、更干燥的夏季和潜在的破坏性晚霜的森林有影响。
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引用次数: 0
Strigolactone perception: a key hub in nutrient responses of higher plants. 独角麦内酯感知:高等植物营养反应的关键枢纽。
IF 9.4 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-09 DOI: 10.1111/nph.70732
Qingliang Hu,Jiayang Li,Bing Wang
Strigolactones (SLs) are intriguing phytohormones that play essential roles in branch or tiller development and adaptation to nutrient availability. Tillering control is a means of improving the grain yield of cereal crops, particularly under nutrient-limited conditions. Recent research has provided new insights into the activation, termination and regulatory mechanisms of SL perception, as well as exciting insights into the low nitrogen (LN)-triggered phosphorylation of SL receptors, which is crucial for the tillering response to fluctuations in nitrogen availability. Low phosphorus (LP) induces accumulation of SLs, which inhibit tillering and facilitate the balance of nitrogen and phosphorus through the SL signaling pathway. Current understanding of SL-mediated nutrient responses offers promising avenues for molecular breeding strategies aimed at improving crop yield and resource use efficiency.
独角麦内酯(SLs)是一种有趣的植物激素,在分枝或分蘖发育和对养分有效性的适应中起着重要作用。分蘖控制是提高谷类作物产量的一种手段,特别是在营养有限的条件下。最近的研究为SL感知的激活、终止和调控机制提供了新的见解,并为低氮(LN)触发的SL受体磷酸化提供了令人兴奋的见解,这对于分蘖对氮有效性波动的响应至关重要。低磷(LP)诱导单链盐积累,通过单链盐信号通路抑制分蘖,促进氮磷平衡。目前对sl介导的营养反应的了解为旨在提高作物产量和资源利用效率的分子育种策略提供了有希望的途径。
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引用次数: 0
A multiscale growth atlas of Arabidopsis: linking cell dynamics to organ development 拟南芥多尺度生长图谱:将细胞动力学与器官发育联系起来。
IF 8.1 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-11-09 DOI: 10.1111/nph.70576
Viraj Alimchandani, Elvis Branchini, Anne-Lise Routier-Kierzkowska

植物的发育依赖于细胞和器官尺度上的协调生长,然而不同研究中生长报告的不一致阻碍了比较分析。我们对拟南芥的生长动态进行了荟萃分析,整合了176项研究的数据,创建了第一个植物生长的多尺度图谱。我们开发了一个统一的数学框架来协调来自不同器官(茎尖分生组织、根、下胚轴和叶)、方法和实验设置的生长数据,允许在细胞和器官水平上转换和直接比较膨胀率。分析显示,器官特异性和一般生长策略都与大小控制有关。在分生组织中,观察到中心区和外周区之间细胞扩增的保守偏移。根伸长主要受伸长区细胞扩张和分化的驱动,而非分生组织的活性。下胚轴和叶片的生长表现出意想不到的相似之处:早期的指数伸长与初级形态发生相似,而后期的线性生长与次级形态发生相匹配。对暗生与光生下胚轴、幼生叶与过渡叶的比较表明,器官大小受生长速率和结垢期持续时间之间的权衡调节。细胞尺度生长在早期发育期间被证明影响最终的器官大小,强调早期测量的必要性。该生长图谱为解释突变表型、指导实验设计和促进我们对植物各器官生长调节的理解提供了基准值和参考框架。
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引用次数: 0
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