首页 > 最新文献

The Internet journal of microbiology最新文献

英文 中文
Maternofoetal transfer of Cytomegalovirus IgG antibodies in Maiduguri, North Eastern Nigeria 尼日利亚东北部迈杜古里巨细胞病毒IgG抗体的母婴转移
Pub Date : 2009-12-31 DOI: 10.5580/c53
T. M. Adisa, D. Bukbuk, T. Harry
A serological study to determine the transfer of Cytomegalovirus (CMV) IgG antibody between 94 mothers and their newborns attending the State Specialist Hospital, Maiduguri was carried out using Enzyme Linked Immunosorbent Assay (ELISA) technique. The ELISA technique used was a commercial kit BIOTEC which detects IgG specific to CMV.Of the 94 mothers tested, 93 (98.9%) have CMV IgG antibody while their corresponding newborns had 86.2% (81 out of 93) seroprevalence rate. The percentage prevalence according to sex of the newborns was 86.3% (44 out of 93) and 69.8% (37 out of 93) males and females respectively. About 87.1% of the newborns were immune to CMV infection compared with 12.9% susceptible.There was a positive correlation between maternal CMV IgG antibody with maternal age (r = 0.57), gestational age (r = 0.03) and the number of pregnancies (r = 0.03).Most (87.1%) mothers in the study are immune to CMV infection and were able to pass adequate protection (CMV IgG) to their newborns leaving a small (12.9%) proportion of susceptible newborns to CMV.
采用酶联免疫吸附试验(ELISA)技术对迈杜古里国家专科医院94名产妇及其新生儿进行巨细胞病毒(CMV) IgG抗体转移的血清学研究。使用的ELISA技术是BIOTEC商用试剂盒,检测CMV特异性IgG。在94名母亲中,93名(98.9%)有CMV IgG抗体,而相应的新生儿血清阳性率为86.2%(93名中有81名)。按新生儿性别划分,男、女患病率分别为86.3%(44 / 93)和69.8%(37 / 93)。新生儿对巨细胞病毒感染的免疫率为87.1%,易感率为12.9%。母体CMV IgG抗体与母体年龄(r = 0.57)、胎龄(r = 0.03)、妊娠次数(r = 0.03)呈正相关。在这项研究中,大多数(87.1%)母亲对巨细胞病毒感染免疫,并且能够给新生儿提供足够的保护(巨细胞病毒IgG),使一小部分(12.9%)新生儿对巨细胞病毒易感。
{"title":"Maternofoetal transfer of Cytomegalovirus IgG antibodies in Maiduguri, North Eastern Nigeria","authors":"T. M. Adisa, D. Bukbuk, T. Harry","doi":"10.5580/c53","DOIUrl":"https://doi.org/10.5580/c53","url":null,"abstract":"A serological study to determine the transfer of Cytomegalovirus (CMV) IgG antibody between 94 mothers and their newborns attending the State Specialist Hospital, Maiduguri was carried out using Enzyme Linked Immunosorbent Assay (ELISA) technique. The ELISA technique used was a commercial kit BIOTEC which detects IgG specific to CMV.Of the 94 mothers tested, 93 (98.9%) have CMV IgG antibody while their corresponding newborns had 86.2% (81 out of 93) seroprevalence rate. The percentage prevalence according to sex of the newborns was 86.3% (44 out of 93) and 69.8% (37 out of 93) males and females respectively. About 87.1% of the newborns were immune to CMV infection compared with 12.9% susceptible.There was a positive correlation between maternal CMV IgG antibody with maternal age (r = 0.57), gestational age (r = 0.03) and the number of pregnancies (r = 0.03).Most (87.1%) mothers in the study are immune to CMV infection and were able to pass adequate protection (CMV IgG) to their newborns leaving a small (12.9%) proportion of susceptible newborns to CMV.","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75537097","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
A study of Bacterial Contamination of Ghanaian Currency Notes in Circulation 流通中的加纳纸币细菌污染的研究
Pub Date : 2009-12-31 DOI: 10.5580/c78
D. N. Tagoe, S. E. Baidoo, I. Dadzie, D. Ahator
The study aimed at determining the presence, type and nature of bacterial contamination of Ghanaian currency notes in circulation. One hundred currency notes of different denominations were randomly collected from sellers on the major streets and markets of the Cape Coast Metropolis into sterile paper bags, shaken in universal bottles with 10ml sterile buffered peptone water, removed and the resulting peptone water incubated overnight and later sub-cultured onto Blood agar, MacConkey, Cysteine Lactose Electrolyte Deficient (CLED) and incubated at 37 0 C for 24hours. Colonial Morphology, Gram Reactions and Biochemical tests were used for identification of isolates. All 100 samples collected were contaminated with one or more bacteria representing 100% contamination. A total of 107 bacteria isolates were obtained from the 100 samples made up of 13 different bacteria species. Bacteria isolated from the notes include Coagulase negative Staphylococci (23.4%), Staphylococci aureus (8.4%), Escherichia coli(5.6%), Bacillus species (23.4%), Klebsiella species (5.6%), Enterobacter species (2.8%), Enterococci species (10.3%), and Proteus species (8.4%) among others. The One Ghana Cedi and Twenty Ghana Cedi notes had more bacteria isolated than their number sampled (43 out of 40) and (25 out of 20) respectively. Although the number of species isolated increased with sample numbers, all the denominations were contaminated with Coagulase Negative Staphylococci and Bacillus species. Four non-circulated notes of each denomination used as controls had no bacteria growth. This work seeks to confirm bacterial contamination of everyday currency and also introduces the nature and levels of contamination of the Ghanaian currency. Introduction The possibility that currency notes might act as environmental vehicles or formites for the transmission of potential microorganism was suggested in the 1970s (Abrams & Waterman, 1972). The use of paper currency for every type of commerce is hard on the currency, with the lower-denomination notes receiving the most handling because they are exchanged frequently (Gadsby, 1998; Ogbu and Uneke, 2007). These means money which may get contaminated during production, storage, after production, and during use are always in circulation (Hugo et al., 1983). Confirmation of contamination of money by drugs has been detected in the United States and United Kingdom (Ritter, 1997; Jenkins, 2001, Thompson, 2002). Contamination from the skin, anal region, wounds, nasal secretions and aerosols generated by sneezing and coughing are potential sources of transfer of microorganisms to currency notes during handling (Mackintosh and Hoffman, 1984). Numerous research on currency in several countries indicated bacterial contamination. A study by Hosen et al., (2002) in Bangladesh revealed coliform contamination of 80% of thirty old two-taka notes, Pope et al., 2002, isolated pathogenic or potentially pathogenic organisms from 94% of one-dollar bills, Ba
分离菌鉴定:采用形态学、革兰氏反应以及吲哚过氧化氢酶、凝固酶、氧化酶、脲酶、过氧化氢酶试验和三糖铁试验(糖发酵和产气)等生化技术对分离的纯菌落进行鉴定。统计分析:采用SPSS 16.0软件对研究数据进行描述性分析。结果分析的所有100个样本都被各种细菌污染,代表100%的污染(表1)。从分析的100个样本中共获得107个细菌分离株,而所有未流通的20个样本均为阴性。从纸币中分离出的细菌有凝固酶阴性葡萄球菌(23.4%)、金黄色葡萄球菌(8.4%)、β-溶血性链球菌(3.7%)、α溶血性链球菌(3.7%)、大肠杆菌(5.6%)、耶尔森菌属(2.8%)、芽孢杆菌属(23.4%)、克雷伯菌属(5.6%)、志贺菌属(0.9%)、肠杆菌属(2.8%)、肠球菌属(10.3%)、单核细胞增李斯特菌属(0.9%)和变形杆菌属(8.4%),(表:1).凝固酶阴性葡萄球菌和芽孢杆菌都是最高的分离株,也存在于所有货币上,而单核增生李斯特菌和志贺氏菌是最少的分离株(表2),在不同货币上各分离一次。
{"title":"A study of Bacterial Contamination of Ghanaian Currency Notes in Circulation","authors":"D. N. Tagoe, S. E. Baidoo, I. Dadzie, D. Ahator","doi":"10.5580/c78","DOIUrl":"https://doi.org/10.5580/c78","url":null,"abstract":"The study aimed at determining the presence, type and nature of bacterial contamination of Ghanaian currency notes in circulation. One hundred currency notes of different denominations were randomly collected from sellers on the major streets and markets of the Cape Coast Metropolis into sterile paper bags, shaken in universal bottles with 10ml sterile buffered peptone water, removed and the resulting peptone water incubated overnight and later sub-cultured onto Blood agar, MacConkey, Cysteine Lactose Electrolyte Deficient (CLED) and incubated at 37 0 C for 24hours. Colonial Morphology, Gram Reactions and Biochemical tests were used for identification of isolates. All 100 samples collected were contaminated with one or more bacteria representing 100% contamination. A total of 107 bacteria isolates were obtained from the 100 samples made up of 13 different bacteria species. Bacteria isolated from the notes include Coagulase negative Staphylococci (23.4%), Staphylococci aureus (8.4%), Escherichia coli(5.6%), Bacillus species (23.4%), Klebsiella species (5.6%), Enterobacter species (2.8%), Enterococci species (10.3%), and Proteus species (8.4%) among others. The One Ghana Cedi and Twenty Ghana Cedi notes had more bacteria isolated than their number sampled (43 out of 40) and (25 out of 20) respectively. Although the number of species isolated increased with sample numbers, all the denominations were contaminated with Coagulase Negative Staphylococci and Bacillus species. Four non-circulated notes of each denomination used as controls had no bacteria growth. This work seeks to confirm bacterial contamination of everyday currency and also introduces the nature and levels of contamination of the Ghanaian currency. Introduction The possibility that currency notes might act as environmental vehicles or formites for the transmission of potential microorganism was suggested in the 1970s (Abrams & Waterman, 1972). The use of paper currency for every type of commerce is hard on the currency, with the lower-denomination notes receiving the most handling because they are exchanged frequently (Gadsby, 1998; Ogbu and Uneke, 2007). These means money which may get contaminated during production, storage, after production, and during use are always in circulation (Hugo et al., 1983). Confirmation of contamination of money by drugs has been detected in the United States and United Kingdom (Ritter, 1997; Jenkins, 2001, Thompson, 2002). Contamination from the skin, anal region, wounds, nasal secretions and aerosols generated by sneezing and coughing are potential sources of transfer of microorganisms to currency notes during handling (Mackintosh and Hoffman, 1984). Numerous research on currency in several countries indicated bacterial contamination. A study by Hosen et al., (2002) in Bangladesh revealed coliform contamination of 80% of thirty old two-taka notes, Pope et al., 2002, isolated pathogenic or potentially pathogenic organisms from 94% of one-dollar bills, Ba","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76864649","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 41
Bile Salt Hydrolase Activity Screening and Resistance to the Toxicity of Bile Salt by Indigenous Lactobacillus Isolates of Pakistan; A Research Article 巴基斯坦本土乳杆菌胆盐水解酶活性筛选及对胆盐毒性的抗性一篇研究文章
Pub Date : 2009-12-31 DOI: 10.5580/10b2
N. Ahmed, Sadaf Ajmal, S. Pervez
Objective: In this study 20 Lactobacillus strains isolated from different sources were selected for an account of their high bile-salt hydrolase (BSH) activity, bile-salt resistance, and tolerance to the toxicity of bile salts. Method: Bile salt hydrolase and resistance to toxic effects of bile salts were checked by assay for Deconjugation of bile salts and by toxicity of conjugated bile salt assay Results: A total of 20 isolates were tested for hydrolase activity of conjugated bile salts sodium salt taurocholic acid and glycocholic acid while toxicity of bile salts was in MRS broth supplemented various concentrations of bile salts. Out of 20 strains 2 strains displayed the largest precipitation zones were selected for toxicity assay. . Conclusion: The present study suggested that the finally two indigenous isolated of Lactobacillus from Pakistan has an excellent hypocholesterolemic effects. They will be used as a Probiotics to prevent hypercholesterolemia from human health while the mechanisms of regulating serum cholesterol and the effect on serum cholesterol level in vivo needs further extensive investigations.
目的:本研究从不同来源分离的20株乳酸菌,对其高胆汁盐水解酶(BSH)活性、胆汁盐抗性和胆汁盐毒性耐受进行了研究。方法:采用胆盐解结试验和偶联胆盐毒性试验检测胆盐水解酶及对胆盐毒性作用的耐受性。结果:对20株分离菌株进行了偶联胆盐、钠、牛磺胆酸、糖胆酸水解酶活性测定,并对添加不同浓度胆盐的MRS肉汤进行了胆盐毒性测定。选取沉淀区最大的2株菌株进行毒性试验。结论:最后两株原产于巴基斯坦的乳杆菌具有良好的降胆固醇作用。它们将作为一种益生菌用于预防人类健康中的高胆固醇血症,但其调节血清胆固醇的机制和对体内血清胆固醇水平的影响有待进一步深入研究。
{"title":"Bile Salt Hydrolase Activity Screening and Resistance to the Toxicity of Bile Salt by Indigenous Lactobacillus Isolates of Pakistan; A Research Article","authors":"N. Ahmed, Sadaf Ajmal, S. Pervez","doi":"10.5580/10b2","DOIUrl":"https://doi.org/10.5580/10b2","url":null,"abstract":"Objective: In this study 20 Lactobacillus strains isolated from different sources were selected for an account of their high bile-salt hydrolase (BSH) activity, bile-salt resistance, and tolerance to the toxicity of bile salts. Method: Bile salt hydrolase and resistance to toxic effects of bile salts were checked by assay for Deconjugation of bile salts and by toxicity of conjugated bile salt assay Results: A total of 20 isolates were tested for hydrolase activity of conjugated bile salts sodium salt taurocholic acid and glycocholic acid while toxicity of bile salts was in MRS broth supplemented various concentrations of bile salts. Out of 20 strains 2 strains displayed the largest precipitation zones were selected for toxicity assay. . Conclusion: The present study suggested that the finally two indigenous isolated of Lactobacillus from Pakistan has an excellent hypocholesterolemic effects. They will be used as a Probiotics to prevent hypercholesterolemia from human health while the mechanisms of regulating serum cholesterol and the effect on serum cholesterol level in vivo needs further extensive investigations.","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74791799","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Production and partial characterization of neutral protease by an indigenously isolated strain of Aspergillus tubingensis NIICC-08155 tubingaspergillus tubingensis NIICC-08155本地分离株中性蛋白酶的生产及部分特性研究
Pub Date : 2009-12-31 DOI: 10.5580/1b13
V. Morya, D. Yadav
An indigenously isolated strain of Aspergillus tubingensis NIICC-08155 from soil of teak dominated vegetation of kusmi forest at Gorakhpur was subjected to neutral protease production and its partial characterization. The maximum production of neutral protease i.e. 68.50 U/ml was attained after 96h of incubation. The crude preparation of protease showed reasonable activity at temperature range of 40 to 60 °C with maximum activity at 40 oC and had a maximum enzyme activity at pH 6.4. The Km value of the enzyme was found to be 45.0 mg/ml and the molecular weight as determined by SDS-PAGE was approximately 45 kDa. The enzyme was completely inhibited by DTT and EDTA.
从戈拉克布尔库斯米森林柚木为主的植被土壤中分离到一株土源塔宾曲霉NIICC-08155,进行了中性蛋白酶生产及其部分特性研究。培养96h后中性蛋白酶的最大产量为68.50 U/ml。粗制蛋白酶在温度40 ~ 60℃范围内表现出合理的活性,40℃时酶活性最高,pH 6.4时酶活性最高。酶的Km值为45.0 mg/ml, SDS-PAGE测定的分子量约为45 kDa。DTT和EDTA能完全抑制该酶。
{"title":"Production and partial characterization of neutral protease by an indigenously isolated strain of Aspergillus tubingensis NIICC-08155","authors":"V. Morya, D. Yadav","doi":"10.5580/1b13","DOIUrl":"https://doi.org/10.5580/1b13","url":null,"abstract":"An indigenously isolated strain of Aspergillus tubingensis NIICC-08155 from soil of teak dominated vegetation of kusmi forest at Gorakhpur was subjected to neutral protease production and its partial characterization. The maximum production of neutral protease i.e. 68.50 U/ml was attained after 96h of incubation. The crude preparation of protease showed reasonable activity at temperature range of 40 to 60 °C with maximum activity at 40 oC and had a maximum enzyme activity at pH 6.4. The Km value of the enzyme was found to be 45.0 mg/ml and the molecular weight as determined by SDS-PAGE was approximately 45 kDa. The enzyme was completely inhibited by DTT and EDTA.","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"75813210","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Production and characterization of a bacteriocin produced by Enterococcus faecium LR/6 粪肠球菌LR/6产细菌素的制备及特性研究
Pub Date : 2009-12-31 DOI: 10.5580/1530
Manoj Kumar, N. Ghosh, S. Srivastava
A soil isolate of Lactic acid bacteria (LAB), strain LR/6 was identified as Enterococcus faecium on the basis of its morphological, biochemical, and 16S rDNA analysis. Strain LR/6 is a potential producer of an antimicrobial compound that followed the kinetic pattern typical of a primary metabolite synthesis and is released extracellularly. The antimicrobial action remained unaffected when treated with β-glycerophosphate and catalase suggesting that the activity is neither based on acid nor H2O2 production. This antimicrobial compound was highly stable over a wide range of pH (2.0 to 8.0), high temperature (boiling and autoclaving) and could be stored stably at a range of temperature (-20oC to 37oC) at least upto one year. The proteinaceous nature of the antimicrobial compound was ascertained by its sensitivity to many proteolytic enzymes confirming it to be a bacteriocin. Strain LR/6 bacteriocin was also insensitive to the presence of α-amylase, lipase, surfactants, organic solvents, and showed a bactericidal mode of action. Crude bacteriocin exhibited broad inhibition spectrum both against related as well as some foodborne pathogenic bacteria including Listeria monocytogenes. Tricine SDS-PAGE analysis and bacteriocin activity assay corresponded to a protein of an apparent molecular mass of ~6.0 kDa.
根据形态、生化和16S rDNA分析,将一株乳酸菌(LAB)分离株LR/6鉴定为粪肠球菌(Enterococcus faecium)。菌株LR/6是一种抗菌化合物的潜在生产者,它遵循初级代谢物合成的典型动力学模式,并在细胞外释放。当用β-甘油磷酸和过氧化氢酶处理时,抗菌作用仍然不受影响,这表明活性既不是基于酸也不是基于H2O2的产生。该抗菌化合物在较宽的pH范围(2.0 ~ 8.0)、高温(煮沸和高压灭菌)下具有很高的稳定性,可在-20 ~ 37℃的温度范围内稳定保存至少一年。该抗菌化合物的蛋白质性质是通过其对许多蛋白水解酶的敏感性来确定的,证实了它是一种细菌素。菌株LR/6细菌素对α-淀粉酶、脂肪酶、表面活性剂、有机溶剂的存在不敏感,并表现出杀菌作用模式。粗细菌素对相关致病菌及部分食源性致病菌(包括单核增生李斯特菌)均有广泛的抑制作用。三氨酸SDS-PAGE分析和细菌素活性测定表明该蛋白的表观分子质量约为6.0 kDa。
{"title":"Production and characterization of a bacteriocin produced by Enterococcus faecium LR/6","authors":"Manoj Kumar, N. Ghosh, S. Srivastava","doi":"10.5580/1530","DOIUrl":"https://doi.org/10.5580/1530","url":null,"abstract":"A soil isolate of Lactic acid bacteria (LAB), strain LR/6 was identified as Enterococcus faecium on the basis of its morphological, biochemical, and 16S rDNA analysis. Strain LR/6 is a potential producer of an antimicrobial compound that followed the kinetic pattern typical of a primary metabolite synthesis and is released extracellularly. The antimicrobial action remained unaffected when treated with β-glycerophosphate and catalase suggesting that the activity is neither based on acid nor H2O2 production. This antimicrobial compound was highly stable over a wide range of pH (2.0 to 8.0), high temperature (boiling and autoclaving) and could be stored stably at a range of temperature (-20oC to 37oC) at least upto one year. The proteinaceous nature of the antimicrobial compound was ascertained by its sensitivity to many proteolytic enzymes confirming it to be a bacteriocin. Strain LR/6 bacteriocin was also insensitive to the presence of α-amylase, lipase, surfactants, organic solvents, and showed a bactericidal mode of action. Crude bacteriocin exhibited broad inhibition spectrum both against related as well as some foodborne pathogenic bacteria including Listeria monocytogenes. Tricine SDS-PAGE analysis and bacteriocin activity assay corresponded to a protein of an apparent molecular mass of ~6.0 kDa.","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"76439488","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Identification Of Lipase – Producing Psychrophilic Yeast, Leucosporidium Sp. 产脂肪酶嗜冷酵母的鉴定。
Pub Date : 2009-12-31 DOI: 10.5580/1215
F. Rashid, R. Rahim, D. Ibrahim
Cold-active enzymes have recently received great attention due to their potential applications in a broad range of industrial, agricultural and medical processes. One of the enzymes is lipase (triacyglycerol acylhydrolases E.C 3.1.1.3) which is unique in catalyzing the hydrolysis of triacylglycerols into free fatty acids and glycerol. In this particular research, an obligate psychrophilic microorganism was isolated from Casey Station, Antarctica. The growth of this microorganism has been tested at different temperatures, 4C, 27C and 37C. At 4C, the microorganism was able to grow whereas at 27C and 37C, there was no growth at all. The presence of lipase enzyme in this microorganism was detected by halo zone on palm oil (substrate) agar plates. Identification of this microorganism was done based on its morphological, biochemical and molecular characteristics. For the morphology analysis, two types of microscopy observation were carried out: phase contrast microscopy and Scanning Electron Microscopy (SEM). Both observations showed budding structures. This suggested that this particular microorganism is psychrophilic yeast. Biochemical tests were done based on its capability to ferment and assimilate sugar. In addition, assimilation of nitrate was also tested. In molecular approach, the genomic DNA (gDNA) of this microorganism was successfully extracted and the extracted gDNA was used for amplification via polymerase chain reaction (PCR) technique using Internal Transcribed Spacer (ITS) primers. The PCR product obtained was sequenced and submitted for Basic Local Alignment Search Tool (BLAST) at National Center for Biotechnological Information (NCBI). The analysis showed that this microorganism contained ITS sequences (highest identity with Leocosporidium sp.).
由于冷活性酶在工业、农业和医疗过程中具有广泛的应用前景,近年来受到了广泛的关注。其中一种酶是脂肪酶(三酰基甘油酰基水解酶E.C 3.1.1.3),它是催化三酰基甘油水解成游离脂肪酸和甘油的独特酶。在这项特殊的研究中,从南极洲的凯西站分离出一种专性的嗜冷微生物。在4℃、27℃和37℃的不同温度下,对这种微生物的生长进行了测试。在4℃时,微生物能够生长,而在27℃和37℃时,微生物根本没有生长。在棕榈油(底物)琼脂板上用晕带法检测该微生物中脂肪酶的存在。根据其形态、生化和分子特征对其进行鉴定。形态学分析采用相衬显微镜和扫描电镜两种显微观察方法。两次观测都显示出出芽结构。这表明这种特殊的微生物是嗜冷酵母。根据其发酵和吸收糖的能力进行了生化试验。此外,还测试了硝酸盐的同化作用。在分子方法上,成功提取了该微生物的基因组DNA (gDNA),并利用内部转录间隔物(ITS)引物通过聚合酶链反应(PCR)技术进行扩增。对所得PCR产物进行测序,并提交给美国国家生物技术信息中心(NCBI)的基本局部比对检索工具(BLAST)。分析结果表明,该微生物含有ITS序列,与Leocosporidium sp.同源性最高。
{"title":"Identification Of Lipase – Producing Psychrophilic Yeast, Leucosporidium Sp.","authors":"F. Rashid, R. Rahim, D. Ibrahim","doi":"10.5580/1215","DOIUrl":"https://doi.org/10.5580/1215","url":null,"abstract":"Cold-active enzymes have recently received great attention due to their potential applications in a broad range of industrial, agricultural and medical processes. One of the enzymes is lipase (triacyglycerol acylhydrolases E.C 3.1.1.3) which is unique in catalyzing the hydrolysis of triacylglycerols into free fatty acids and glycerol. In this particular research, an obligate psychrophilic microorganism was isolated from Casey Station, Antarctica. The growth of this microorganism has been tested at different temperatures, 4C, 27C and 37C. At 4C, the microorganism was able to grow whereas at 27C and 37C, there was no growth at all. The presence of lipase enzyme in this microorganism was detected by halo zone on palm oil (substrate) agar plates. Identification of this microorganism was done based on its morphological, biochemical and molecular characteristics. For the morphology analysis, two types of microscopy observation were carried out: phase contrast microscopy and Scanning Electron Microscopy (SEM). Both observations showed budding structures. This suggested that this particular microorganism is psychrophilic yeast. Biochemical tests were done based on its capability to ferment and assimilate sugar. In addition, assimilation of nitrate was also tested. In molecular approach, the genomic DNA (gDNA) of this microorganism was successfully extracted and the extracted gDNA was used for amplification via polymerase chain reaction (PCR) technique using Internal Transcribed Spacer (ITS) primers. The PCR product obtained was sequenced and submitted for Basic Local Alignment Search Tool (BLAST) at National Center for Biotechnological Information (NCBI). The analysis showed that this microorganism contained ITS sequences (highest identity with Leocosporidium sp.).","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89007337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Exchange of a Conjugative Plasmid At Different Soil Moisture Levels Between Streptomyces Species Colonizing Artificial Soil Aggregates 不同土壤湿度下链霉菌种间定殖人工土壤团聚体的共轭质粒交换
Pub Date : 2009-12-31 DOI: 10.5580/215a
B. Bleakley, D. Crawford
Spores of a Streptomyces lividans strain (donor) bearing the recombinant conjugative plasmid pIJ303, which codes for thiostrepton resistance, and spores of a plasmid-free Streptomyces parvulus strain (recipient) were added together to finelysieved, sterile silt loam soil. This bulk soil was adjusted to either 20%, 35% or 45% of the soil’s water holding capacity. To this inoculated bulk soil were added sterile, nutrientamended, artificial soil aggregates. After incubation to allow streptomycete growth and aggregate colonization, both the sieved bulk soil and the aggregates were assayed for numbers of transconjugants by spreadplanting on a thiostrepton – agar selective medium. This allowed estimation of parental ability to colonize nutrient – rich soil sites at different soil moisture levels, and comparison of plasmid exchange frequency in the nonamended bulk soil versus the nutrient – rich soil aggregates. Plasmid exchange was detected only on aggregates of about 20% water holding capacity or less (4.2% wt/wt H20). The soil moisture threshold for heterotrophic streptomycete activity appeared to lie between 2.87% and 4.2% wt/wt H20 for the nutrientamended soil aggregates.
将带有硫链菌抗性重组质粒pIJ303的lividans链霉菌菌株(供体)和无质粒的parvulus链霉菌菌株(受体)的孢子一起添加到细筛的无菌粉壤土中。这种散装土壤被调整为土壤持水量的20%、35%或45%。在接种后的块状土壤中加入无菌、营养改良的人工土壤团聚体。经过孵育,使链霉菌生长和聚集体定植后,通过在硫链菌-琼脂选择性培养基上铺开,检测筛选过的大块土壤和聚集体的转偶联菌数量。这样就可以估计在不同土壤水分水平下亲本在富营养化土壤中的定殖能力,并比较未改良的散装土壤与富营养化土壤团聚体的质粒交换频率。质粒交换仅在持水量约为20%或更少(4.2% wt/wt H20)的聚集体上检测到。异养链霉菌活性的土壤水分阈值在2.87% ~ 4.2% wt/wt H20之间。
{"title":"Exchange of a Conjugative Plasmid At Different Soil Moisture Levels Between Streptomyces Species Colonizing Artificial Soil Aggregates","authors":"B. Bleakley, D. Crawford","doi":"10.5580/215a","DOIUrl":"https://doi.org/10.5580/215a","url":null,"abstract":"Spores of a Streptomyces lividans strain (donor) bearing the recombinant conjugative plasmid pIJ303, which codes for thiostrepton resistance, and spores of a plasmid-free Streptomyces parvulus strain (recipient) were added together to finelysieved, sterile silt loam soil. This bulk soil was adjusted to either 20%, 35% or 45% of the soil’s water holding capacity. To this inoculated bulk soil were added sterile, nutrientamended, artificial soil aggregates. After incubation to allow streptomycete growth and aggregate colonization, both the sieved bulk soil and the aggregates were assayed for numbers of transconjugants by spreadplanting on a thiostrepton – agar selective medium. This allowed estimation of parental ability to colonize nutrient – rich soil sites at different soil moisture levels, and comparison of plasmid exchange frequency in the nonamended bulk soil versus the nutrient – rich soil aggregates. Plasmid exchange was detected only on aggregates of about 20% water holding capacity or less (4.2% wt/wt H20). The soil moisture threshold for heterotrophic streptomycete activity appeared to lie between 2.87% and 4.2% wt/wt H20 for the nutrientamended soil aggregates.","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86563211","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Production Of Protease By Submerged Fermentation Using Rhizopus Microsporus Var Oligospous 利用少穗小孢子根霉深层发酵生产蛋白酶的研究
Pub Date : 2009-12-31 DOI: 10.5580/2582
L. Sarao, M. Arora, V. Sehgal, S. Bhatia
Production of protease via submerged fermentation using Rhizopus microsporus var oligospous was studied using shake flask cultures. After 96 h of growth on a BOD shaker revolving at 150 rpm, protease was partially purified using the isopropanol. Factors affecting the enzyme production viz incubation temperature, initial pH of the shake flask medium. and inoculum size were optimized. Protease having the maximum enzyme activity of 521.739 IU was obtained at an incubation temperature of 30oC, an initial pH of the basal medium as 5.5 and an inoculum size of to 1x10 spores ml of Tween-80. Protease deactivated at 80 oC.
用摇瓶培养法研究了小孢子根霉寡孢子根霉深层发酵生产蛋白酶的工艺。在150转/分的BOD摇床上生长96小时后,用异丙醇部分纯化蛋白酶。影响产酶的因素有孵育温度、摇瓶培养基的初始pH。并对接种量进行优化。在培养温度为30℃,基础培养基初始pH为5.5,接种量为1 × 10孢子ml的Tween-80的条件下,获得酶活性最高的蛋白酶为521.739 IU。蛋白酶在80℃时失活。
{"title":"Production Of Protease By Submerged Fermentation Using Rhizopus Microsporus Var Oligospous","authors":"L. Sarao, M. Arora, V. Sehgal, S. Bhatia","doi":"10.5580/2582","DOIUrl":"https://doi.org/10.5580/2582","url":null,"abstract":"Production of protease via submerged fermentation using Rhizopus microsporus var oligospous was studied using shake flask cultures. After 96 h of growth on a BOD shaker revolving at 150 rpm, protease was partially purified using the isopropanol. Factors affecting the enzyme production viz incubation temperature, initial pH of the shake flask medium. and inoculum size were optimized. Protease having the maximum enzyme activity of 521.739 IU was obtained at an incubation temperature of 30oC, an initial pH of the basal medium as 5.5 and an inoculum size of to 1x10 spores ml of Tween-80. Protease deactivated at 80 oC.","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"74329274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
Isolation, characterization and mutagenesis of exopolysaccharide synthesizing new strains of lactic acid bacteria 乳酸菌胞外多糖合成新菌株的分离、鉴定及诱变
Pub Date : 2009-12-31 DOI: 10.5580/1bbb
Seema Patel, A. Goyal
Bacterial exopolysaccharides have wide applications in various industries. In this perspective, it is essential to explore the natural biodiversity for novel strains of exopolysaccharide synthesizing lactic acid bacteria (LAB). Two novel isolates of lactic acid bacteria with higher enzyme activity were screened and characterized based on a battery of microscopic, staining, metabolic, physiological and antibiotic sensitivity tests. The two isolates of LAB named SPO and SPA were cocci shaped, Gram Positive, catalase negative, heterofermentative, vancomycin resistant, broad spectrum carbohydrate fermentating with exopolysaccharide synthesizing activity. EPS synthesizing activity was confirmed by activity staining of EPS using sucrose as substrate. This confirmed that the EPS produced was dextran and the enzyme responsible for its synthesis is dextransucrase. The enzyme activity of SPO was 3.8 U/ml and that of SPA was 3.4 U/ml. For strain improvement, the isolates were subjected to UV radiation. The isolate SPO did not give promising results. However, SPA after UV-mutagenesis, generated two novel mutants, SPAm1 and SPAm2. The enzyme activity of SPAm1 was 4.9 U/ml and that of SPAm2 was 4.7 U/ml. The mutants possessed about 40% enhanced enzyme activity over the wild type strain.
细菌胞外多糖在各行各业有着广泛的应用。从这个角度来看,探索新的外多糖合成乳酸菌(LAB)菌株的自然生物多样性是必要的。基于显微镜、染色、代谢、生理和抗生素敏感性试验,筛选了两株具有较高酶活性的新型乳酸菌。菌株SPO和SPA为球菌型,革兰氏阳性,过氧化氢酶阴性,异发酵,耐万古霉素,广谱碳水化合物发酵,具有胞外多糖合成活性。以蔗糖为底物对EPS进行活性染色,证实了EPS的合成活性。这证实了所产生的EPS是葡聚糖,而负责其合成的酶是葡聚糖蔗糖酶。SPO酶活性为3.8 U/ml, SPA酶活性为3.4 U/ml。为了改良菌株,对分离菌株进行了紫外辐射处理。分离的SPO没有给出令人满意的结果。然而,SPA经过uv诱变后,产生了两个新的突变体SPAm1和SPAm2。SPAm1酶活性为4.9 U/ml, SPAm2酶活性为4.7 U/ml。该突变体的酶活性比野生型菌株提高了约40%。
{"title":"Isolation, characterization and mutagenesis of exopolysaccharide synthesizing new strains of lactic acid bacteria","authors":"Seema Patel, A. Goyal","doi":"10.5580/1bbb","DOIUrl":"https://doi.org/10.5580/1bbb","url":null,"abstract":"Bacterial exopolysaccharides have wide applications in various industries. In this perspective, it is essential to explore the natural biodiversity for novel strains of exopolysaccharide synthesizing lactic acid bacteria (LAB). Two novel isolates of lactic acid bacteria with higher enzyme activity were screened and characterized based on a battery of microscopic, staining, metabolic, physiological and antibiotic sensitivity tests. The two isolates of LAB named SPO and SPA were cocci shaped, Gram Positive, catalase negative, heterofermentative, vancomycin resistant, broad spectrum carbohydrate fermentating with exopolysaccharide synthesizing activity. EPS synthesizing activity was confirmed by activity staining of EPS using sucrose as substrate. This confirmed that the EPS produced was dextran and the enzyme responsible for its synthesis is dextransucrase. The enzyme activity of SPO was 3.8 U/ml and that of SPA was 3.4 U/ml. For strain improvement, the isolates were subjected to UV radiation. The isolate SPO did not give promising results. However, SPA after UV-mutagenesis, generated two novel mutants, SPAm1 and SPAm2. The enzyme activity of SPAm1 was 4.9 U/ml and that of SPAm2 was 4.7 U/ml. The mutants possessed about 40% enhanced enzyme activity over the wild type strain.","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81364158","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 16
The available SRL3 deletion strain of Saccharomyces cerevisiae contains a truncation of DNA damage tolerance protein Mms2: Implications for Srl3 and Mms2 functions. 酿酒酵母SRL3缺失菌株含有DNA损伤耐受蛋白Mms2的截断:对SRL3和Mms2功能的影响。
Pub Date : 2009-01-01 DOI: 10.5580/42c
Eunmi Kim, Wolfram Siede

A screen of the commercially available collection of haploid deletion mutants of Saccharomyces cerevisiae for spontaneous mutator mutants newly identified a deletion of SRL3. This gene had been previously isolated as a suppressor of lethality of checkpoint kinase deletions if overexpressed. We found DNA damage sensitivity and extended checkpoint arrests to be associated with this strain. However, when crossed to wild-type, a mutant gene conferring these phenotypes was found to segregate from the SRL3 deletion. The mutation was identified as a C-terminal truncation of Mms2, an E2 ubiquitin conjugating enzyme involved in error-free replicative bypass of lesions. This confirmed an earlier report that Mms2 may be required to restrain error-prone polymerase ζ activity and underscored that residues of the C-terminus are necessary for Mms2 function. Srl3, on the other hand, does not appear to influence DNA damage sensitivity or spontaneous mutability if deleted. However, the absence of these phenotypes does not contradict its likely role as a positive regulator of dNTP levels.

通过对商业上可获得的酿酒酵母单倍体缺失突变体的筛选,发现了SRL3的缺失。该基因先前被分离出来,作为过度表达的检查点激酶缺失的致死率的抑制因子。我们发现DNA损伤敏感性和延长检查点逮捕与该菌株有关。然而,当与野生型杂交时,发现具有这些表型的突变基因从SRL3缺失中分离出来。该突变被鉴定为Mms2的c端截断,Mms2是一种E2泛素偶联酶,参与病变的无错误复制旁路。这证实了早先的一篇报道,即Mms2可能需要抑制容易出错的聚合酶ζ活性,并强调了c端残基对于Mms2的功能是必要的。另一方面,Srl3如果被删除,似乎不会影响DNA损伤敏感性或自发易变性。然而,这些表型的缺失并不与它作为dNTP水平的积极调节因子的可能作用相矛盾。
{"title":"The available <i>SRL3</i> deletion strain of <i>Saccharomyces cerevisiae</i> contains a truncation of DNA damage tolerance protein Mms2: Implications for Srl3 and Mms2 functions.","authors":"Eunmi Kim,&nbsp;Wolfram Siede","doi":"10.5580/42c","DOIUrl":"https://doi.org/10.5580/42c","url":null,"abstract":"<p><p>A screen of the commercially available collection of haploid deletion mutants of <i>Saccharomyces cerevisiae</i> for spontaneous mutator mutants newly identified a deletion of <i>SRL3</i>. This gene had been previously isolated as a suppressor of lethality of checkpoint kinase deletions if overexpressed. We found DNA damage sensitivity and extended checkpoint arrests to be associated with this strain. However, when crossed to wild-type, a mutant gene conferring these phenotypes was found to segregate from the <i>SRL3</i> deletion. The mutation was identified as a C-terminal truncation of Mms2, an E2 ubiquitin conjugating enzyme involved in error-free replicative bypass of lesions. This confirmed an earlier report that Mms2 may be required to restrain error-prone polymerase ζ activity and underscored that residues of the C-terminus are necessary for Mms2 function. Srl3, on the other hand, does not appear to influence DNA damage sensitivity or spontaneous mutability if deleted. However, the absence of these phenotypes does not contradict its likely role as a positive regulator of dNTP levels.</p>","PeriodicalId":22514,"journal":{"name":"The Internet journal of microbiology","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2009-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4008323/pdf/nihms238834.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"32315447","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
The Internet journal of microbiology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1