Pub Date : 2026-04-01Epub Date: 2026-02-01DOI: 10.1016/j.ultramic.2026.114326
Amit Kumar , Zhongtao Ma , Julian Taubmann , Arash Nemati , Kristian Speranza Mølhave , Joerg R. Jinschek , Magnus Björnsson , Søren Bredmose Simonsen
Reliable sample temperature measurements are essential in environmental transmission electron microscope (ETEM) experiments. In this study, the effect of flowing gases on the temperature distribution at a MEMS microheater in gas phase is investigated. A computational fluid dynamics model is developed and compared with experimental data. The modeling results agree well with experimental measurements based on the melting temperature of Zn nanoparticles, confirming the model’s reliability. The results show that the temperature profile across the heating chip in the case with H2 environment is less uniform compared to the case of vacuum and O2. For example, at a set temperature of 900 °C in 3 mbar H2, a temperature difference of 60 °C is observed between the central sample position compared to the surrounding arc-shaped heater which also is the temperature sensor, while the difference in the vacuum case is only 13 °C. Temperature is one of the key parameters in in-situ TEM experiments and, therefore, these findings are important in the design of ETEM experiments, especially when using MEMS microheaters with relatively large distances between TEM sample and microheater/sensor.
{"title":"Temperature distributions in MEMS microheaters during gas phase experiments in an environmental TEM","authors":"Amit Kumar , Zhongtao Ma , Julian Taubmann , Arash Nemati , Kristian Speranza Mølhave , Joerg R. Jinschek , Magnus Björnsson , Søren Bredmose Simonsen","doi":"10.1016/j.ultramic.2026.114326","DOIUrl":"10.1016/j.ultramic.2026.114326","url":null,"abstract":"<div><div>Reliable sample temperature measurements are essential in environmental transmission electron microscope (ETEM) experiments. In this study, the effect of flowing gases on the temperature distribution at a MEMS microheater in gas phase is investigated. A computational fluid dynamics model is developed and compared with experimental data. The modeling results agree well with experimental measurements based on the melting temperature of Zn nanoparticles, confirming the model’s reliability. The results show that the temperature profile across the heating chip in the case with H<sub>2</sub> environment is less uniform compared to the case of vacuum and O<sub>2</sub>. For example, at a set temperature of 900 °C in 3 mbar H<sub>2</sub>, a temperature difference of 60 °C is observed between the central sample position compared to the surrounding arc-shaped heater which also is the temperature sensor, while the difference in the vacuum case is only 13 °C. Temperature is one of the key parameters in <em>in-situ</em> TEM experiments and, therefore, these findings are important in the design of ETEM experiments, especially when using MEMS microheaters with relatively large distances between TEM sample and microheater/sensor.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114326"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146120414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-01-29DOI: 10.1016/j.ultramic.2026.114321
Mostafa Ghanbari Kouchaksaraei, Arash Bahrami
We exploit simultaneous resonance phenomenon to improve performance of multifrequency atomic force microscopy. Simultaneous resonances, activated due to the nonlinear nature of the tip oscillations and intermodal couplings for a certain family of multi-frequency excitations, may be used to gather more information about the sample. To make simultaneous resonance occur, excitation frequencies are tuned in a way that two resonances take place simultaneously. We consider a non-contact atomic force microscope and model the three-dimensional probe-tip structure as an Euler–Bernoulli beam. Equation governing motion of the probe tip are obtained employing the Hamilton extended principle. Direct harmonic balance method is then used to solve this equation. It is found out, through extensive numerical simulations, that the present excitation scheme, which activates simultaneous resonance, improves both the resolution and the compositional contrast of images. Numerical investigations demonstrate that a small change in the Hamaker constant and the initial tip–sample distance leads to a significant change in the amplitude and/or phase shift of the simultaneous resonance. High sensitivity of the amplitude to the initial tip–sample distance can be utilized to increase the vertical resolution in environments with high and low quality factors. Also, simultaneous resonance phase shift sensitivity to the Hamaker constant is noticeably increased compared to that of the conventional multi-frequency atomic force microscopy. As a result, the compositional contrast is considerably enhanced.
{"title":"Exploring the potential of simultaneous resonance in multi-frequency atomic force microscopy","authors":"Mostafa Ghanbari Kouchaksaraei, Arash Bahrami","doi":"10.1016/j.ultramic.2026.114321","DOIUrl":"10.1016/j.ultramic.2026.114321","url":null,"abstract":"<div><div>We exploit simultaneous resonance phenomenon to improve performance of multifrequency atomic force microscopy. Simultaneous resonances, activated due to the nonlinear nature of the tip oscillations and intermodal couplings for a certain family of multi-frequency excitations, may be used to gather more information about the sample. To make simultaneous resonance occur, excitation frequencies are tuned in a way that two resonances take place simultaneously. We consider a non-contact atomic force microscope and model the three-dimensional probe-tip structure as an Euler–Bernoulli beam. Equation governing motion of the probe tip are obtained employing the Hamilton extended principle. Direct harmonic balance method is then used to solve this equation. It is found out, through extensive numerical simulations, that the present excitation scheme, which activates simultaneous resonance, improves both the resolution and the compositional contrast of images. Numerical investigations demonstrate that a small change in the Hamaker constant and the initial tip–sample distance leads to a significant change in the amplitude and/or phase shift of the simultaneous resonance. High sensitivity of the amplitude to the initial tip–sample distance can be utilized to increase the vertical resolution in environments with high and low quality factors. Also, simultaneous resonance phase shift sensitivity to the Hamaker constant is noticeably increased compared to that of the conventional multi-frequency atomic force microscopy. As a result, the compositional contrast is considerably enhanced.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114321"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146078700","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-01-27DOI: 10.1016/j.ultramic.2026.114324
Joana Nobre, Tiago Cordeiro, Tiago T. Robalo, Ana P. Carapeto, Mário S. Rodrigues
The interatomic potential is key to understanding all properties of materials. Yet, conventional atomic force microscopes do not usually measure the interatomic potential, because they lack control of the tip-sample distance. Here, we propose a simple methodology for measuring tip–surface interactions directly as a function of tip-sample distance, rather than deflection as a function of sample displacement. We use an AC interferometer to monitor the absolute tip displacement. When a force is applied on the tip a negative feedback loop displaces the cantilever anchoring point, deflecting the lever such that the tip position remains constant. This feedback loop actively maintains the tip at a distance from an optical fibre where the interferometer sensitivity is maximum. As a result, the tip-sample distance or the indentation is directly given by the sample motion and the tip does not jump-to-contact.
{"title":"Enhancing atomic force microscopy stability through second harmonic optical fibre cavity control","authors":"Joana Nobre, Tiago Cordeiro, Tiago T. Robalo, Ana P. Carapeto, Mário S. Rodrigues","doi":"10.1016/j.ultramic.2026.114324","DOIUrl":"10.1016/j.ultramic.2026.114324","url":null,"abstract":"<div><div>The interatomic potential is key to understanding all properties of materials. Yet, conventional atomic force microscopes do not usually measure the interatomic potential, because they lack control of the tip-sample distance. Here, we propose a simple methodology for measuring tip–surface interactions directly as a function of tip-sample distance, rather than deflection as a function of sample displacement. We use an AC interferometer to monitor the absolute tip displacement. When a force is applied on the tip a negative feedback loop displaces the cantilever anchoring point, deflecting the lever such that the tip position remains constant. This feedback loop actively maintains the tip at a distance from an optical fibre where the interferometer sensitivity is maximum. As a result, the tip-sample distance or the indentation is directly given by the sample motion and the tip does not jump-to-contact.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114324"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146078699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-02-02DOI: 10.1016/j.ultramic.2026.114327
Corrado Bongiorno , Antonio M. Mio , Gianfranco Sfuncia , Mario S. Alessandrino , Salvatore Adamo , Cettina Bottari , Corrado R. Spinella , Giuseppe Nicotra
In this study, we employ 4D Scanning Transmission Electron Microscopy (4D-STEM) to investigate the relationship between image contrast, convergent beam electron diffraction (CBED) patterns, and local lattice distortions near dislocations in 2H-GaN. Our findings reveal a pronounced anisotropic spreading of the CBED pattern, which correlates with the local distortion of atomic channels and, therefore, with the direction of the Burgers vector of the dislocation. This behavior is a consequence of electron beam channelling perturbation caused by low-curvature channels. Thanks to the 4D-STEM capabilities, an accurate analysis of the localized CBED patterns around a screw dislocation reveals that the characteristic two-lines contrast observed experimentally arise mainly from an angular redistribution of the coherent diffracted electrons reaching the annular detector. The enlargement of the diffraction pattern develops in opposite directions on the two side of the dislocation because reproduces the local bending of the channels. By exploiting this directional de-channeling, we demonstrate the ability to determine both the Burgers vector and therefore the character of dislocations in a well-aligned zone axis configuration. These results highlight the potential of 4D-STEM as a powerful tool for atomic-scale defect characterization in semiconducting materials.
{"title":"Anisotropic redistribution of coherently de-channelled electrons around dislocations in gallium nitride revealed by 4D Scanning Transmission Electron Microscopy","authors":"Corrado Bongiorno , Antonio M. Mio , Gianfranco Sfuncia , Mario S. Alessandrino , Salvatore Adamo , Cettina Bottari , Corrado R. Spinella , Giuseppe Nicotra","doi":"10.1016/j.ultramic.2026.114327","DOIUrl":"10.1016/j.ultramic.2026.114327","url":null,"abstract":"<div><div>In this study, we employ 4D Scanning Transmission Electron Microscopy (4D-STEM) to investigate the relationship between image contrast, convergent beam electron diffraction (CBED) patterns, and local lattice distortions near dislocations in 2H-GaN. Our findings reveal a pronounced anisotropic spreading of the CBED pattern, which correlates with the local distortion of atomic channels and, therefore, with the direction of the Burgers vector of the dislocation. This behavior is a consequence of electron beam channelling perturbation caused by low-curvature channels. Thanks to the 4D-STEM capabilities, an accurate analysis of the localized CBED patterns around a screw dislocation reveals that the characteristic two-lines contrast observed experimentally arise mainly from an angular redistribution of the coherent diffracted electrons reaching the annular detector. The enlargement of the diffraction pattern develops in opposite directions on the two side of the dislocation because reproduces the local bending of the channels. By exploiting this directional de-channeling, we demonstrate the ability to determine both the Burgers vector and therefore the character of dislocations in a well-aligned zone axis configuration. These results highlight the potential of 4D-STEM as a powerful tool for atomic-scale defect characterization in semiconducting materials.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114327"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146166839","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-02-02DOI: 10.1016/j.ultramic.2026.114325
Yu Chen , Yuan Lu , Xiangchen Hu , Yi Chen , Qixi Mi , Yi Yu
Radiation damage is problematic in focused ion beam (FIB) preparation of transmission electron microscopy (TEM) specimens, especially for extremely beam-sensitive materials such as organic-inorganic hybrid halide perovskites (OIHPs), where ion beam induced structural damage substantially hinders research on microstructure. While cryogenic FIB (cryo-FIB) can effectively preserve specimens’ crystallinity, the operational complexity and high cost of cryo-FIB, as well as the low-temperature phase transitions of perovskites, significantly limit its application. Here, we demonstrate a systematically optimized room-temperature preparation protocol for OIHPs to preserve its structure. Through systematic optimization of FIB parameters (acceleration voltage, beam current, and milling angle) and concurrent consideration of electron irradiation during FIB processing in the dual-beam FIB system, the electron irradiation induced intragranular cracking and lamella bending in OIHPs were effectively suppressed. This enables the successful preparation of large-area, orientation-specific high-quality lamella with great crystallinity and uniformity, and without phase transition, from bulk OIHP samples. The sharp electron diffraction spots and low-dose aberration-corrected high-resolution TEM images validated the artifact-free TEM specimens.
{"title":"Room-temperature focused ion beam preparation of sensitive organic-inorganic hybrid perovskites","authors":"Yu Chen , Yuan Lu , Xiangchen Hu , Yi Chen , Qixi Mi , Yi Yu","doi":"10.1016/j.ultramic.2026.114325","DOIUrl":"10.1016/j.ultramic.2026.114325","url":null,"abstract":"<div><div>Radiation damage is problematic in focused ion beam (FIB) preparation of transmission electron microscopy (TEM) specimens, especially for extremely beam-sensitive materials such as organic-inorganic hybrid halide perovskites (OIHPs), where ion beam induced structural damage substantially hinders research on microstructure. While cryogenic FIB (cryo-FIB) can effectively preserve specimens’ crystallinity, the operational complexity and high cost of cryo-FIB, as well as the low-temperature phase transitions of perovskites, significantly limit its application. Here, we demonstrate a systematically optimized room-temperature preparation protocol for OIHPs to preserve its structure. Through systematic optimization of FIB parameters (acceleration voltage, beam current, and milling angle) and concurrent consideration of electron irradiation during FIB processing in the dual-beam FIB system, the electron irradiation induced intragranular cracking and lamella bending in OIHPs were effectively suppressed. This enables the successful preparation of large-area, orientation-specific high-quality lamella with great crystallinity and uniformity, and without phase transition, from bulk OIHP samples. The sharp electron diffraction spots and low-dose aberration-corrected high-resolution TEM images validated the artifact-free TEM specimens.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114325"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146158501","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-02-02DOI: 10.1016/j.ultramic.2026.114328
Idan Biran , Frederik Dam , Sophie Kargo Kaptain , Ruben Bueno Villoro , Maarten Wirix , Christian Kisielowski , Peter C.K. Vesborg , Jakob Kibsgaard , Thomas Bligaard , Christian D. Damsgaard , Joerg R. Jinschek , Stig Helveg
Transmission electron microscopy (TEM) has reached ∼ 0.5 Å information limit in high vacuum conditions, enabling single-atom sensitive imaging of nanomaterials. Extending this capability to gaseous environments would allow for similar visualizations of nanomaterial dynamics under chemically reactive conditions. Here, we examine a new TEM system that obtains 0.5 Å information limit at pressures up to 1 mbar, demonstrated using nanocrystalline Au immersed in N2. The system features an open gas-cell with a four-stage differential pumping system, a 5th order aberration corrector for broad-beam TEM, a monochromatized electron beam, an ultra-stable microscope platform, Nelsonian low electron dose-rate illumination, and direct electron detection. Young’s fringe experiments and exit wave phase imaging confirm the atomic resolution and indicate a possible location-dependent vibrational blur at a surface termination. Thus, this platform advances in situ and operando TEM studies of gas-surface interactions in diverse fields, including catalysis, corrosion, and crystal growth.
{"title":"Open gas-cell transmission electron microscopy at 0.5 Å information limit","authors":"Idan Biran , Frederik Dam , Sophie Kargo Kaptain , Ruben Bueno Villoro , Maarten Wirix , Christian Kisielowski , Peter C.K. Vesborg , Jakob Kibsgaard , Thomas Bligaard , Christian D. Damsgaard , Joerg R. Jinschek , Stig Helveg","doi":"10.1016/j.ultramic.2026.114328","DOIUrl":"10.1016/j.ultramic.2026.114328","url":null,"abstract":"<div><div>Transmission electron microscopy (TEM) has reached ∼ 0.5 Å information limit in high vacuum conditions, enabling single-atom sensitive imaging of nanomaterials. Extending this capability to gaseous environments would allow for similar visualizations of nanomaterial dynamics under chemically reactive conditions. Here, we examine a new TEM system that obtains 0.5 Å information limit at pressures up to 1 mbar, demonstrated using nanocrystalline Au immersed in N<sub>2</sub>. The system features an open gas-cell with a four-stage differential pumping system, a 5<sup>th</sup> order aberration corrector for broad-beam TEM, a monochromatized electron beam, an ultra-stable microscope platform, Nelsonian low electron dose-rate illumination, and direct electron detection. Young’s fringe experiments and exit wave phase imaging confirm the atomic resolution and indicate a possible location-dependent vibrational blur at a surface termination. Thus, this platform advances <em>in situ</em> and <em>operando</em> TEM studies of gas-surface interactions in diverse fields, including catalysis, corrosion, and crystal growth.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114328"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146173531","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-02-07DOI: 10.1016/j.ultramic.2026.114330
Harison S. Wiesman , David Wallis
We examine the effect of pattern quality on the output of high-angular resolution electron backscatter diffraction (HR-EBSD) analyses. Band contrast, as a proxy for pattern quality, was varied by adjusting the number of frames averaged per electron backscatter pattern during data collection. The same region in a deformed sample of the mineral olivine was mapped six times varying the number of frames averaged between 1 and 30 between each map. Each data set was analyzed with HR-EBSD, producing maps of intragranular stress heterogeneity and geometrically necessary dislocation (GND) density. As the number of frames averaged increased, the noise in stress and GND density decreased, revealing more substructure in the mapped region. The worst pixels, with low band contrast, are the most improved by increased frame averaging, whereas those with high band contrast are largely unaffected. Additionally, the probability distribution of stresses narrows as high-stress noise is reduced with increased pattern quality, which also affects estimates of dislocation density from statistical analysis of the stress distributions. As regions with high stress and/or high GND density are typically of interest in HR-EBSD maps and are often associated with low band contrast, frame averaging may be used as a tool to improve the quality of these analyses. Most importantly, however, is that comparisons are made between HR-EBSD datasets with similar mean band contrast in future studies to ensure that observed differences are microstructural in origin and not an artefact of data collection.
{"title":"The effect of pattern quality on measurements of stress heterogeneity and geometrically necessary dislocation density by high-angular resolution electron backscatter diffraction","authors":"Harison S. Wiesman , David Wallis","doi":"10.1016/j.ultramic.2026.114330","DOIUrl":"10.1016/j.ultramic.2026.114330","url":null,"abstract":"<div><div>We examine the effect of pattern quality on the output of high-angular resolution electron backscatter diffraction (HR-EBSD) analyses. Band contrast, as a proxy for pattern quality, was varied by adjusting the number of frames averaged per electron backscatter pattern during data collection. The same region in a deformed sample of the mineral olivine was mapped six times varying the number of frames averaged between 1 and 30 between each map. Each data set was analyzed with HR-EBSD, producing maps of intragranular stress heterogeneity and geometrically necessary dislocation (GND) density. As the number of frames averaged increased, the noise in stress and GND density decreased, revealing more substructure in the mapped region. The worst pixels, with low band contrast, are the most improved by increased frame averaging, whereas those with high band contrast are largely unaffected. Additionally, the probability distribution of stresses narrows as high-stress noise is reduced with increased pattern quality, which also affects estimates of dislocation density from statistical analysis of the stress distributions. As regions with high stress and/or high GND density are typically of interest in HR-EBSD maps and are often associated with low band contrast, frame averaging may be used as a tool to improve the quality of these analyses. Most importantly, however, is that comparisons are made between HR-EBSD datasets with similar mean band contrast in future studies to ensure that observed differences are microstructural in origin and not an artefact of data collection.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114330"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146173422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-01-13DOI: 10.1016/j.ultramic.2026.114319
Chen Liu , Jingkai Xu , Qingxiao Wang , Tianchao Guo , Maolin Chen , Dongxing Zheng , Husam N. Alshareef , Xixiang Zhang
The preparation of high-quality plan-view transmission electron microscopy (TEM) lamellae is essential for investigating the in-plane properties of thin films. However, current focused ion beam (FIB) techniques are limited by ion-beam damage, surface contamination, and time-consuming workflows. Here, we introduce NaCl microcrystals as a sacrificial protective layer, which effectively shields the surface from ion irradiation and can be completely removed by simple dissolution in water, leaving a pristine surface. Building on this, we established a universal and streamlined FIB workflow for plan-view lamellae fabrication from thin films that eliminates the need for conventional Pt/C deposition and avoids custom hardware, relying solely on standard commercial components. Using a classic metal multilayer and an ultrathin epitaxial oxide film as representative model systems, we demonstrate that the prepared plan-view lamellae exhibit large uniform areas, preserved film structures, and contamination-free surfaces, enabling reliable surface-sensitive TEM analyses. This time-efficient and user-friendly approach offers a powerful solution for the contamination- and damage-free preparation of plan-view TEM lamellae across diverse thin-film systems, paving the way for in-depth investigations of their in-plane properties.
{"title":"A universal FIB approach for contamination- and damage-free plan-view TEM lamellae using NaCl sacrificial layers","authors":"Chen Liu , Jingkai Xu , Qingxiao Wang , Tianchao Guo , Maolin Chen , Dongxing Zheng , Husam N. Alshareef , Xixiang Zhang","doi":"10.1016/j.ultramic.2026.114319","DOIUrl":"10.1016/j.ultramic.2026.114319","url":null,"abstract":"<div><div>The preparation of high-quality plan-view transmission electron microscopy (TEM) lamellae is essential for investigating the in-plane properties of thin films. However, current focused ion beam (FIB) techniques are limited by ion-beam damage, surface contamination, and time-consuming workflows. Here, we introduce NaCl microcrystals as a sacrificial protective layer, which effectively shields the surface from ion irradiation and can be completely removed by simple dissolution in water, leaving a pristine surface. Building on this, we established a universal and streamlined FIB workflow for plan-view lamellae fabrication from thin films that eliminates the need for conventional Pt/C deposition and avoids custom hardware, relying solely on standard commercial components. Using a classic metal multilayer and an ultrathin epitaxial oxide film as representative model systems, we demonstrate that the prepared plan-view lamellae exhibit large uniform areas, preserved film structures, and contamination-free surfaces, enabling reliable surface-sensitive TEM analyses. This time-efficient and user-friendly approach offers a powerful solution for the contamination- and damage-free preparation of plan-view TEM lamellae across diverse thin-film systems, paving the way for in-depth investigations of their in-plane properties.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114319"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145979276","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2025-12-26DOI: 10.1016/j.ultramic.2025.114305
Dana O. Byrne , Stephanie M. Ribet , Demie Kepaptsoglou , Quentin M. Ramasse , Colin Ophus , Frances I. Allen
Tetravacancies in monolayer hexagonal boron nitride (hBN) with consistent edge termination (boron or nitrogen) form triangular nanopores with electrostatic potentials that can be leveraged for applications such as selective ion transport and neuromorphic computing. In order to quantitatively predict the properties of these structures, an atomic-level understanding of their local electronic and chemical environments is required. Moreover, robust methods for their precision manufacture are needed. Here we use electron irradiation in a scanning transmission electron microscope (STEM) at a high dose rate to drive the formation of boron-terminated tetravacancies in monolayer hBN. Characterization of the defects is achieved using aberration-corrected STEM, monochromated electron energy-loss spectroscopy (EELS), and electron ptychography. Z-contrast in STEM and chemical fingerprinting by core-loss EELS enable identification of the edge terminations, while electron ptychography gives insight into structural relaxation of the tetravacancies and provides evidence of enhanced electron density around the defect perimeters indicative of bonding effects.
{"title":"Fabrication and characterization of boron-terminated tetravacancies in monolayer hBN using STEM, EELS and electron ptychography","authors":"Dana O. Byrne , Stephanie M. Ribet , Demie Kepaptsoglou , Quentin M. Ramasse , Colin Ophus , Frances I. Allen","doi":"10.1016/j.ultramic.2025.114305","DOIUrl":"10.1016/j.ultramic.2025.114305","url":null,"abstract":"<div><div>Tetravacancies in monolayer hexagonal boron nitride (hBN) with consistent edge termination (boron or nitrogen) form triangular nanopores with electrostatic potentials that can be leveraged for applications such as selective ion transport and neuromorphic computing. In order to quantitatively predict the properties of these structures, an atomic-level understanding of their local electronic and chemical environments is required. Moreover, robust methods for their precision manufacture are needed. Here we use electron irradiation in a scanning transmission electron microscope (STEM) at a high dose rate to drive the formation of boron-terminated tetravacancies in monolayer hBN. Characterization of the defects is achieved using aberration-corrected STEM, monochromated electron energy-loss spectroscopy (EELS), and electron ptychography. Z-contrast in STEM and chemical fingerprinting by core-loss EELS enable identification of the edge terminations, while electron ptychography gives insight into structural relaxation of the tetravacancies and provides evidence of enhanced electron density around the defect perimeters indicative of bonding effects.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114305"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145897877","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-04-01Epub Date: 2026-02-02DOI: 10.1016/j.ultramic.2026.114323
Hao Luan , Yinan Wu , Yifan Bai , Yuting Wu , He Chen
Bacterial classification commonly relies on the specialized knowledge and the laborious procedure. To address the issue, a spatial–spectral feature fusion attention residual network (SFFA-Net) is designed to achieve automated bacterial classification in this paper. Specifically, a bacterial image dataset generated by the atomic force microscopy is first established for high-precision network training. Subsequently, the SFFA-Net is built via designing a residual network to perform feature extraction and encode the discriminative representations of the specimens. On this basis, the twin-branch feature extraction module is designed to extract two-dimensional and three-dimensional features, respectively. Subsequently, the improved squeeze and excitation attention blocks are introduced to focus on the key areas of the feature maps to improve the classification accuracy. Besides, an auxiliary classifier is designed to further enhance the model performance by bringing in additional supervision signals. The superiority of the proposed method is verified through comparative experiments.
{"title":"A spatial-spectral feature fusion attention residual network for automated bacterial classification via atomic force microscopy","authors":"Hao Luan , Yinan Wu , Yifan Bai , Yuting Wu , He Chen","doi":"10.1016/j.ultramic.2026.114323","DOIUrl":"10.1016/j.ultramic.2026.114323","url":null,"abstract":"<div><div>Bacterial classification commonly relies on the specialized knowledge and the laborious procedure. To address the issue, a spatial–spectral feature fusion attention residual network (SFFA-Net) is designed to achieve automated bacterial classification in this paper. Specifically, a bacterial image dataset generated by the atomic force microscopy is first established for high-precision network training. Subsequently, the SFFA-Net is built via designing a residual network to perform feature extraction and encode the discriminative representations of the specimens. On this basis, the twin-branch feature extraction module is designed to extract two-dimensional and three-dimensional features, respectively. Subsequently, the improved squeeze and excitation attention blocks are introduced to focus on the key areas of the feature maps to improve the classification accuracy. Besides, an auxiliary classifier is designed to further enhance the model performance by bringing in additional supervision signals. The superiority of the proposed method is verified through comparative experiments.</div></div>","PeriodicalId":23439,"journal":{"name":"Ultramicroscopy","volume":"282 ","pages":"Article 114323"},"PeriodicalIF":2.0,"publicationDate":"2026-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146126402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}