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EXPERIENCE OF USING MAXIMAL ENTROPY METHOD (MAXENT) FOR ZONING OF THE TERRITORY BY HERS RISK USING NIZHNY NOVGOROD REGION AS AN EXAMPLE 以下诺夫哥罗德地区为例,利用最大熵法(maxent)进行风险区划的经验
Q3 Medicine Pub Date : 2017-10-28 DOI: 10.36233/0372-9311-2017-5-39-45
L. Solntsev, V. Dubyansky
Цель. Зонирование территории Нижегородской области по риску заражения ГЛПС с использованием метода Maxent. Материалы и методы. Материалами являлись данные Центра гигиены и эпидемиологии по Нижегородской области по каждому случаю зара­ жения ГЛ ПС за 2010 — 2016 гг.; данные по условиям окружающей среды (Bioclim); данные по вегетационной активности (MODIS). Обработка проводилась в пакетах ArcGIS 10.2.2 и Maxent 3.3.Зк. Результаты. Получена и валидирована модель для оценки потенциаль­ ного риска заражения ГЛПС на территории Нижегородской области. Заключение. Полученные результаты не противоречат фактически наблюдаемой пространственной локализации случаев заражения ГЛПС (точность предсказания составляет более 75%), выявляют связь между пространственной локализацией случаев заражения ГЛПС и со­ четания факторов среды и позволяют формировать прогнозы изменения границ потен­ циально опасных участков при изменении факторов среды.
目标。根据使用Maxent方法感染glps的风险,对下城区进行分区。材料和方法。材料是城市下城区卫生与流行病学中心的数据,用于2010年至2016年期间的每一次gpp启动;环境数据(Bioclim);生物体活动数据(MODIS)。处理在ArcGIS 10.2.2和Maxent 3.3.zk包中进行。结果。收到并验证了一个模型,以评估glps在下城区的潜在风险。囚犯。结果并不与实际监测的glps感染(预测准确率超过75%)相矛盾,它们显示了glps感染病例的空间定位与环境因素的并列之间的联系,并允许在环境因素变化时预测潜在危险区域的变化。
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引用次数: 0
TRANSFER OF DANGEROUS VIRAL INFECTIONS IN THE NON-ENDEMIC AREA 危险病毒感染在非流行地区的转移
Q3 Medicine Pub Date : 2017-10-28 DOI: 10.36233/0372-9311-2017-5-91-100
V. A. Markin, D. Chifanov
and the of of the the At there is a significant expansion of the ranges of some zooantroponozes pathogens, filovirus Ebola and arboviruses — Rift Valley fever, Chikungunya. When extending the boundaries of epidemic foci in the new territory for the pathogen, can occur aggravating of clinical manifestations of the disease and increase mortality among the indigenous population. Extremely hazardous exotic viral hemorrhagic fever (Ebola, Lassa) when transfer with sick people in some cases, can cause contamination of the contact persons. Rift hlley fever — one of the most aggressive arboviruses, in the case of importa­ tion can form stable epidemic foci. Transfer of Zika fever in the territory of the substantial epidemiological value. Epidemiological factors, essential for the formation of new areas of pathogens the presence of permissive candidates in In parts of Africa and Asia, with soils poor in selenium, were first introduced pathogens or highly virulent strains of influenza A, SARS, Ebola and of SIV, and drifts on these and similar areas have led to an increase in the virulence of viruses.
此外,一些人畜共患病病原体、丝状病毒、埃博拉病毒和虫媒病毒(裂谷热、基孔肯雅热)的传播范围显著扩大。当病原体在新的领土上扩大疫源地边界时,可能会发生疾病临床表现的恶化和土著人口死亡率的增加。极其危险的外来病毒性出血热(埃博拉、拉沙)在某些情况下在病人之间传播时,可导致接触者受到污染。裂谷热——最具攻击性的虫媒病毒之一,在输入的情况下可形成稳定的疫源地。境内寨卡热转移具有重大的流行病学价值。在非洲和亚洲部分地区,由于土壤缺硒,出现了允许的候选地,这些因素对形成新的病原体区域至关重要,首先引入了甲型流感、非典型肺炎、埃博拉病毒和SIV的病原体或高毒力菌株,这些地区和类似地区的漂移导致病毒的毒力增加。
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引用次数: 1
PSEUDOTUBERCULOSIS: PATHOGENETIC VALUE OF INNATE IMMUNITY CELLS 假结核:先天免疫细胞的致病价值
Q3 Medicine Pub Date : 2017-10-28 DOI: 10.36233/0372-9311-2017-5-78-90
L. Somova, N. G. Plekhova, E. Drobot, I. Lyapun
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引用次数: 1
СОСТОЯНИЕ АНТИБИОТИКОРЕЗИСТЕНТНОСТИ KLEBSIELLA PNEUMONIAE
Q3 Medicine Pub Date : 2017-10-28 DOI: 10.36233/0372-9311-2017-5-70-77
Е. В. Анганова, А. В. Ветохина, Л. А. Распопина, Е. Л. Кичигина, Е. Д. Савилов
Klebsiella pneumoniae microorganisms belong to a group of the most prevalent clinically significant pathogens with a high level of antibacterial resistance (ESKAPE). The speed of formation of antibiotics-resistance by K. pneumoniae strains has sharply increased and reached pandemic scale. One of the main clinically significant mechanisms of antimicrobial resistance is (3-lactamase production, the groups being active depending on the region, country' and hospital. Currently, a significant part of nosocomial K. pneumoniae is resistant to penicillins, 11I-IV generation cephalosporins. The growth of resistance of klebsiellae to carbapenems is a serious threat to the healthcare system. First ofall, KPC-, OXA-, NDM-, VIM-, IMP-producing Widespread of carbapenem-resistant klebsiellae gives evidence on the necessity of international collaboration within the framework of antibiotics resistance control. An increase of frequency of obtained resistance of K. pneumoniae to non-(3-lactame antibiotics (fluoroquinolones, aminoglycosides) is noted. Isolates of K. pneumoniae resistant to tygecyclin, colistin are registered. In general, the problem of antibiotics resistance of causative agents of human diseases including K. pneumoniae continues to intensify. This is a serious threat to world public health that requires action in all sectors of the state.
肺炎克雷伯菌微生物属于一组最普遍的具有高水平抗菌耐药(ESKAPE)的临床重要病原体。肺炎克雷伯菌菌株抗生素耐药性的形成速度急剧增加,并达到大流行的规模。抗微生物药物耐药性的主要临床重要机制之一是(3-内酰胺酶)的产生,根据地区、国家和医院的不同,产生的群体是否活跃。目前,相当一部分医院感染的肺炎克雷伯菌对青霉素类、第11I-IV代头孢菌素耐药。克雷伯菌对碳青霉烯类耐药性的增长是对卫生保健系统的严重威胁。首先,KPC-、OXA-、NDM-、VIM-、imp -产碳青霉烯耐药克雷伯菌的广泛存在证明了在抗生素耐药性控制框架内开展国际合作的必要性。注意到肺炎克雷伯菌对非3-内酰胺类抗生素(氟喹诺酮类、氨基糖苷类)产生耐药性的频率有所增加。已登记肺炎克雷伯菌对加环素、粘菌素耐药的分离株。总的来说,包括肺炎克雷伯菌在内的人类疾病病原体的抗生素耐药性问题继续加剧。这是对世界公共卫生的严重威胁,需要国家所有部门采取行动。
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引用次数: 5
ПРИЧИНЫ ОБОСТРЕНИЯ ЭПИДЕМИОЛОГИЧЕСКОЙ ОБСТАНОВКИ ПО КРЫМСКОЙ ГЕМОРРАГИЧЕСКОЙ ЛИХОРАДКЕ В РОССИЙСКОЙ ФЕДЕРАЦИИ В 2016 ГОДУ 2016年俄罗斯联邦克里米亚出血热流行病学加剧的原因
Q3 Medicine Pub Date : 2017-10-28 DOI: 10.36233/0372-9311-2017-5-17-23
N. F. Vasilenko, O. V. Maletskaya, E. A. Manin, D. A. Prislegina, A. S. Volynkina, Ya. V. Lisitskaya, L. I. Shaposhnikova, T. V. Taran, A. Kulichenko
Aim.The analysis of causes of deterioration epidemiological situation on Crimean-Congo haemorrhagic fever (CCHF) in the Russian Federation in 2016. Materials and methods. Data of statistical documentation of Departments of Rospotrebnadzor, Centers of Hygiene and Epidemiology in subjects of the Russian Federation, Plague Control Research Institutions and Anti-Plague stations from 8 subjects of the Southern and 7 subjects of the North-Caucasian Federal Districts were used. The findings have been treated using by Excel program. Results. In 2016, epidemiological manifestations of CCHF are identified on the territory of 6 subjects of the south of Russia. An increase in the incidence of CC H F occurred in the Stavropol Territory, the Republic of Kalmykia, Astrakhan and Volgograd Regions. The main cause of the deterioration epidemiological situation on CCHF was increasing of the number and the period of activity of ticks marginatum, in the epidemic season as a result of favorable climatic conditions; incorrect dates of the realization and inadequacy of the acaricide treatments livestock and natural biotopes. Conclusion. For the improvement epidemiological situation on CCHF timely realization of the acaricide treatments in the early spring (March-April) livestock and natural biotopes using effective insecticides and with its further entomological control it is necessary.
的目标。2016年俄罗斯联邦克里米亚-刚果出血热流行病学形势恶化原因分析材料和方法。数据来源于俄罗斯联邦各部门、俄罗斯联邦卫生和流行病学中心、鼠疫控制研究机构和鼠疫防疫站的统计文献,来自南部高加索联邦区的8名受试者和北高加索联邦区的7名受试者。这些发现已经用Excel程序进行了处理。结果。2016年,在俄罗斯南部6个受试者的领土上发现了CCHF的流行病学表现。斯塔夫罗波尔领土、卡尔梅克共和国、阿斯特拉罕和伏尔加格勒地区的丙型肝炎发病率有所增加。疫情恶化的主要原因是气候条件有利,疫区边缘蜱数量增多,活动时间延长;不正确的实现日期和不充分的杀螨处理牲畜和自然生物群落。结论。为改善该病的流行状况,有必要及时在早春(3 - 4月)家畜和自然生物区采用有效的杀虫剂进行杀螨处理,并进一步进行昆虫学防治。
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引用次数: 4
COMPARATIVE ANALYSIS OF EFFECTIVENESS OF SOLID-PHASE METHODS OF IMMUNE DETECTION OF BOTULINIC TOXIN IN BLOOD SERA OF A PATIENT WITH BOTULISM DIAGNOSIS 固相法免疫检测1例肉毒中毒患者血清肉毒毒素的效果比较分析
Q3 Medicine Pub Date : 2017-10-28 DOI: 10.36233/0372-9311-2017-5-64-70
T. Y. Zagoskina, E. Markov, E. Chaporgina, Yu. O. Popova, T. M. Dolgova, O. Gavrilova, T. S. Taikova, A. V. Nikitina, Pomelova Vg, Osin Ns, S. V. Balakhonov
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引用次数: 0
DETECTION OF INDEL-MARKERS IN GENOMES OF BURKHOLDERIA PSEUDOMALLEI STRAINS FOR INTRA-SPECIES GENOTYPING 假麦氏伯克氏菌基因组中indel标记的检测及其种内基因分型研究
Q3 Medicine Pub Date : 2017-08-28 DOI: 10.36233/0372-9311-2017-4-35-41
M. L. Ledeneva, A. Vodopianov, G. A. Tkachenko, S. Vodopianov, S. Savchenko, I. Shpak
Aim. Search for potential INDEL-markers in genomes of Burkholderia pseudomallei strains, as well as evaluation of the possibility of their use for intra-species genotyping. Materials and methods. Full-genome sequences of 25 В. pseudomallei strains with known geographic regions of isolation from GenBank database were studied. INDEL-marker search was carried out using authors’ program Gene Expert. Cluster analysis was carried out using genetic distance by R. Sokal and C. Michener and neighbor joining method. Results. 11 INDEL-markers were detected that allowed to split the studied strains into 13 genotypes. Spectrum of INDEL-patterns characteristic for Australian strains was determined. A possibility of existence of certain phylogeographic patterns of Thailand isolates is shown. Conclusion. A possibility of INDEL-markers to differentiate isolates of B. pseudomallei into 2 geographic populations (Australian and South-eastern Asia origin) that allows to determine the source of melioidosis outbreak and transmission routes of the pathogen is detected.
的目标。寻找假马氏伯克霍尔德菌基因组中潜在的indel标记,并评估其用于种内基因分型的可能性。材料和方法。25个全基因组序列В。对GenBank数据库中已知地理区域分离的假麦氏菌进行了研究。使用作者程序Gene Expert进行indel标记搜索。利用R. Sokal和C. Michener的遗传距离和邻居连接法进行聚类分析。结果:检测到11个indel标记,可将菌株分为13个基因型。测定了澳大利亚菌株的indel型特征谱。显示了泰国分离株存在某些系统地理模式的可能性。结论。检测到利用indel标记将假假芽孢杆菌分离物区分为2个地理种群(澳大利亚和东南亚起源)的可能性,从而可以确定类鼻疽病暴发的来源和病原体的传播途径。
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引用次数: 0
APPLICATION OF TIME-OF-FLIGHT MASS-SPECTROMETRY FOR DETECTION OF CAUSATIVE AGENT OF BRUCELLOSIS IN BLOOD SAMPLES IN EXPERIMENT 飞行时间质谱法在血液样品中布鲁氏菌病原菌检测中的应用
Q3 Medicine Pub Date : 2017-08-28 DOI: 10.36233/0372-9311-2017-4-9-17
D. V. Ulshina, D. Kovalev, D. G. Ponomarenko, D. V. Rusanova, N. M. Shvetsova, T. Taran, I. Kuznetsova, A. M. Zhirov, A. Khachaturova, I. Borzdova, A. Kulichenko
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引用次数: 0
МОДЕЛИРОВАНИЕ ВИРУСНОГО ГЕПАТИТА Е НА КАРЛИКОВЫХ ДОМАШНИХ СВИНЬЯХ 侏儒家畜病毒型肝炎模拟
Q3 Medicine Pub Date : 2017-08-28 DOI: 10.36233/0372-9311-2017-4-48-54
S. A. Gulyaev, I. A. Potemkin, V. S. Kichatova, A. A. Karlsen, O. V. Isaeva, T. V. Guiyaeva, M. A. Vannus, I. V. Gordeichuk, K. K. Kyuregyan, M. I. Mikhailov
Aim. Experimental reproduction of HEV-infection in mini-pigs and comparative analysis of virological and immunological characteristics of experimental infection. Materials and methods. Wiesenauer minipigs (2 females and 4 males, age 50 - 60 days, weight 5-10 kg) were infected by HEV genotype 3 strain isolated from swine feces in Belgorod region in 2013. The virus was administered as a 10% clarified feces extract (800 pi). Blood (weekly) and feces (daily) were sampled from the animals for 49 days. Anti-HEV IgG were determined in sera samples using DS- ElA-ANTI-HEV-G (Diagnostic Systems) system, HEV RNA in samples of feces extracts and blood sera - RT-PCR. Results. Wiesenauer minipigs were sensitive to HEV genotype 3 infection, infection developed in all the animals after administration of the virus, that was accompanied by the presence of HEV RNA in feces for 2 weeks and seroconversion by anti-HEV. Comparative analysis of virological characteristics of experimental H EV-infection in mini- and standard pigs has shown, that the duration of the infection in mini-pigs is shorter, and seroconversion by anti-HEV occurs earlier. Conclusion. Sensitivity to HEV genotype 3 and lower weight make mini-pigs a comfortable alternative to standard swine and primates for modelling HEV infection in vivo.
的目标。小型猪hev感染的实验繁殖及实验感染的病毒学和免疫学特征的比较分析。材料和方法。2013年,从别尔哥罗德地区猪粪中分离出HEV基因3型毒株,感染了Wiesenauer小型猪(2母4公,50 ~ 60日龄,体重5 ~ 10 kg)。该病毒以10%澄清粪便提取物(800 pi)的形式施用。采集动物血液(每周一次)和粪便(每天一次),为期49天。采用DS- ElA-ANTI-HEV-G (Diagnostic Systems)系统检测血清中抗HEV IgG、粪便提取物和血清中HEV RNA。结果。Wiesenauer小型猪对HEV基因3型感染敏感,所有动物在给药后均出现感染,并伴有粪便中存在HEV RNA 2周,并通过抗HEV血清转化。对小型猪和标准猪实验型hev感染的病毒学特征进行对比分析,发现小型猪感染持续时间较短,抗hev血清转化发生时间较早。结论。对HEV基因型3的敏感性和较低的体重使迷你猪成为标准猪和灵长类动物在体内模拟HEV感染的舒适选择。
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引用次数: 2
INTERACTION OF SALMONELLA WITH HOST ORGANISM 沙门氏菌与宿主生物的相互作用
Q3 Medicine Pub Date : 2017-08-28 DOI: 10.36233/0372-9311-2017-4-91-100
M. Boichenko, V. Zverev, E. Volchkova
Diseases caused by Salmonella enterica species bacteria remain a healthcare challenge. Salmonella enterica species is divided into typhoid serovars that cause systemic infection and non­ typhoid serovars that most frequently have a course of gastroenteritis with a development of inflam­ matory diarrhea. Both types of salmonella are opportunistic intracellular parasites able to invade and reproduce in both professional and non-professional phagocytes, e.g. M-cells and enterocytes. Invasion of cells and reproduction in them relates to functioning of salmonella pathogenicity island genes that determined synthesis of the third type of secretory system (T3SS). Contrary to the salmonella typhoid group serovars, non-typhoid serovars cause a development of inflammatory diarrhea, and effector molecules of T3SS as well as innate immunity components take part in it.
由肠道沙门氏菌引起的疾病仍然是一个卫生保健挑战。肠道沙门氏菌种类分为引起全身感染的伤寒血清型和最常见的肠胃炎伴炎症性腹泻的非伤寒血清型。这两种类型的沙门氏菌都是机会性的细胞内寄生虫,能够在专业和非专业吞噬细胞中侵入和繁殖,例如m细胞和肠细胞。沙门氏菌对细胞的侵袭和繁殖与决定第三型分泌系统(T3SS)合成的致病性岛基因的功能有关。与伤寒沙门氏菌群血清型相反,非伤寒血清型引起炎症性腹泻的发展,T3SS的效应分子以及先天免疫成分参与其中。
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引用次数: 3
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