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Role of integrated omics in unravelling fruit stress and defence responses during postharvest: A review 整合组学在揭示果实采后胁迫和防御反应中的作用综述
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100118
Zinash A Belay , Oluwafemi James Caleb

Fruit are susceptible to quality loss and deterioration after harvest due to high metabolic and physiological activities. Over the last four decades various postharvest treatments have ensured maintenance of quality, control of diseases or decay by slowing down the postharvest ripening and senesce. The fruit quality change during postharvest however, has been mostly explored using physicochemical characteristics. Considering the complexity of fruit physiology and metabolism, the application of omics techniques could aid the in-depth analysis and understanding of fruit quality change during postharvest treatment. Therefore, this review presents recent information on the application of integrated omics (transcriptomics, proteomics, and metabolomics) in postharvest research, with an overview on fruit quality and safety. Trends in omics data analysis for fruit during postharvest handling was highlighted. The role of integrated omics in improving our understanding of fruit response during natural postharvest progression (towards decay) during storage, as well as in case of induced responses due to the application of biocontrols was discussed. The article concluded with the outlooks of future studies on the application of integrated omics as the catalyst for innovative postharvest solutions.

果实在收获后由于代谢和生理活动旺盛,易发生品质损失和变质。在过去的四十年中,各种采后处理通过减缓采后成熟和衰老来确保保持质量,控制疾病或腐烂。而果实采后品质变化主要是利用理化特性来研究的。考虑到果实生理代谢的复杂性,应用组学技术有助于深入分析和理解采后处理过程中果实品质的变化。因此,本文综述了整合组学(转录组学、蛋白质组学和代谢组学)在采后研究中的应用,并对果实质量和安全进行了综述。强调了水果采后处理过程中组学数据分析的趋势。讨论了整合组学在提高我们对果实在采后自然进程(走向腐烂)储存期间的反应以及由于应用生物防治而引起的诱导反应的理解中的作用。文章最后展望了整合组学作为创新采后解决方案催化剂的未来研究。
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引用次数: 8
β-carotene genetically-enriched lyophilized orange juice increases antioxidant capacity and reduces β-amyloid proteotoxicity and fat accumulation in Caenorhabditis elegans 富含β-胡萝卜素基因的冻干橙汁增加了秀丽隐杆线虫的抗氧化能力,减少了β-淀粉样蛋白毒性和脂肪积累
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100141
Iolanda Raquel Ferreira Paulo , Ricardo Basílio de Oliveira Caland , Cesar Orlando Muñoz Cadavid , Giovanna Martins Melo , Liliane Soares De Castro Bezerra , Elsa Pons , Leandro Peña , Riva de Paula Oliveira

Citrus sinensis orange juice is an excellent dietary source of β-carotene, a well-known antioxidant. However, β-carotene concentrations are relatively low in most cultivars. We developed a new orange through metabolic engineering strategy (GS) with 33.72-fold increase in β-carotene content compared to its conventional counterpart (CV). Using Caenorhabditis elegans, we found that animals treated with GS showed a greater reduction in intracellular reactive oxygen species (ROS) which is associated with a greater resistance to oxidative stress and induction of the expression of antioxidant genes. Moreover, animals treated with GS orange showed a more effective protection against β-amyloid proteotoxicity and greater hypolipidemic effect under high glucose diet compared to animals treated with CV. These data demonstrate that the increased amount of β-carotene in orange actually provides a greater beneficial effect in C. elegans and a valuable proof of principle to support further studies in mammals and humans.

柑桔汁是β-胡萝卜素的极佳膳食来源,β-胡萝卜素是一种众所周知的抗氧化剂。然而,大多数品种的β-胡萝卜素浓度相对较低。我们通过代谢工程策略(GS)培育出了一种β-胡萝卜素含量比常规橙子(CV)增加33.72倍的新橙子。通过对秀丽隐杆线虫的研究,我们发现经GS处理的动物细胞内活性氧(ROS)的减少幅度更大,这与更强的氧化应激抗性和诱导抗氧化基因的表达有关。此外,与CV处理的动物相比,GS橙处理的动物在高糖饮食下表现出更有效的β-淀粉样蛋白毒性和更大的降血脂作用。这些数据表明,橙子中β-胡萝卜素含量的增加实际上对秀丽隐杆线虫有更大的有益作用,并为进一步在哺乳动物和人类中进行研究提供了有价值的原理证明。
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引用次数: 1
Bioaccessibility assay, antioxidant activity and consumer-oriented sensory analysis of Beta vulgaris by-product encapsulated in Ca(II)-alginate beads for different foods 海藻酸Ca(II)-海藻酸微球包封的β - vulgaris副产物在不同食品中的生物可及性、抗氧化活性和消费者感官分析
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100140
Tatiana Rocio Aguirre-Calvo , Natalia Sosa , Tamara Anahí López , María Ximena Quintanilla-Carvajal , Mercedes Perullini , Patricio Román Santagapita

Bioaccessibility analysis and antioxidant activity along in vitro digestion and a consumer-oriented sensory analysis were conducted in three potential functional foods based on Ca(II)-alginate beads containing bioactive compounds extracted from beet stems. Ca(II)-alginate beads per se, and two selected products (cookies and turkish delights supplemented with the beads) were prepared. Regarding the beads, among the attributes rated by consumers, visual appreciation predominates, being color in the just-as-right (JAR) category and in the like preference. Instead, both flavor and sweet taste were attributes highly penalized and should be improved in beads to be accepted as food per se. A higher percentage of customers preferred cookies and turkish delights instead of only beads, considering global satisfaction. Regarding in vitro digestion, there was a significant content of phenolic compounds in the products with beads, showing a bioaccessibility greater than 80% (for cookies) and 26% (for turkish delights). Also, the antioxidant capacity measured by ABTS ranged between 50 and 109% for cookies and turkish delights, being lower when measured by FRAP (between 20 and 30%, respectively). Thus, including the beads with beet stem extract in both products leads to a significant increase in the content of phenolic compounds and in the antioxidant capacity compared to their counterparts, protecting the compound during oral and gastric phases. These results allow the generation of improved Ca(II)-alginate systems with promising functional properties for the development of ingredients and functional foods.

以甜菜茎中提取的含有生物活性化合物的海藻酸钙微球为原料,对三种潜在的功能食品进行了生物可及性分析、体外消化抗氧化活性分析和消费者感官分析。Ca(II)-海藻酸盐珠本身,和两种选定的产品(饼干和土耳其美食补充珠)制备。对于珠子,在消费者评价的属性中,视觉欣赏占主导地位,在just-as-right (JAR)类别和类似偏好中,颜色占主导地位。相反,味道和甜味都是受到高度惩罚的属性,应该在珠子上加以改进,以被接受为食物本身。考虑到全球满意度,更高比例的顾客更喜欢饼干和土耳其美食,而不仅仅是珠子。在体外消化方面,含珠产品中酚类化合物含量显著,生物可及性大于80%(饼干)和26%(土耳其甜点)。此外,ABTS测定的饼干和土耳其甜点的抗氧化能力在50%到109%之间,而FRAP测定的抗氧化能力较低(分别在20%到30%之间)。因此,在两种产品中加入甜菜茎提取物的珠子,与它们的同类相比,酚类化合物的含量和抗氧化能力显著增加,在口服和胃期保护化合物。这些结果允许生成改进的Ca(II)-海藻酸盐体系,具有开发成分和功能食品的有前途的功能特性。
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引用次数: 0
Transcriptome sequencing and gas chromatography–mass spectrometry analyses provide insights into β-caryophyllene biosynthesis in Brassica campestris 转录组测序和气相色谱-质谱分析提供了油菜β-石竹烯生物合成的见解
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100129
Haibin Wang , Chen Zong , Aimei Bai , Shuilin Yuan , Yan Li , Zhanghong Yu , Ruiping Tian , Tongkun Liu , Xilin Hou , Ying Li

Sesquiterpenes are important defensive secondary metabolites and aroma components. However, limited information is available on the mechanism of sesquiterpene formation and composition in the non-heading Chinese cabbage (NHCC) leaf. Therefore, headspace solid-phase microextraction/gas chromatography–mass spectrometry (HS-SPME/GC–MS) combined with transcriptome analysis was used to study the mechanism of volatile organic compound formation. A total of 26 volatile organic compounds were identified in two NHCC cultivars ‘SZQ’ and ‘XQC’ and their F1 hybrids. Among these, sesquiterpene β-caryophyllene was identified only in ‘XQC’ and F1. Five genes encoding caryophyllene synthase were identified. The candidate β-caryophyllene synthase genes BcTPSa11 and BcTPSa21 had high expression levels only in ‘XQC’ and F1. In addition, several transcription factors of MYB-related, MYB, bHLH, and AP2/ERF families were identified by co-expression, suggesting that they regulate β-caryophyllene biosynthesis. Our results provide a molecular basis for sesquiterpene biosynthesis as well as insights into the regulatory network of β-caryophyllene in NHCC.

倍半萜是重要的防御性次生代谢产物和香气成分。然而,关于倍半萜在不结籽大白菜(NHCC)叶片中形成和组成的机理研究有限。因此,采用顶空固相微萃取/气相色谱-质谱法(HS-SPME/ GC-MS)结合转录组分析对挥发性有机物的形成机制进行研究。从2个NHCC品种SZQ和XQC及其F1杂种中共鉴定出26种挥发性有机物。其中倍半萜β-石竹烯仅在‘XQC’和F1中得到鉴定。鉴定出5个编码石竹烯合成酶的基因。候选β-石竹烯合成酶基因BcTPSa11和BcTPSa21仅在‘XQC’和F1中高表达。此外,通过共表达鉴定了MYB相关、MYB、bHLH和AP2/ERF家族的几个转录因子,表明它们调节β-石竹烯的生物合成。我们的研究结果为倍半萜的生物合成提供了分子基础,并揭示了NHCC中β-石竹烯的调控网络。
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引用次数: 2
Effects of galactosyltransferase on EPS biosynthesis and freeze-drying resistance of Lactobacillus acidophilus NCFM 半乳糖转移酶对嗜酸乳杆菌NCFM EPS生物合成及冻干抗性的影响
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100145
Lingyu Kong , Yuze Huang , Xiaoqun Zeng , Congyan Ye , Zhen Wu , Yuxing Guo , Daodong Pan

Galactosyltransferase (GalT) is an important enzyme in synthesizing exopolysaccharide (EPS), the major polymer of biofilms protecting cells from severe conditions. However, the contribution to, and regulatory mechanism of GalT, in stressor resistance are still unclear. Herein, we successfully overexpressed GalT in Lactobacillus acidophilus NCFM by genetic engineering. The GalT activity and freeze-drying survival rate of the recombinant strain were significantly enhanced. The EPS yield also increased by 17.8%, indicating a positive relationship between freeze-drying resistance and EPS. RNA-Seq revealed that GalT could regulate the flux of the membrane transport system, pivotal sugar-related metabolic pathways, and promote quorum sensing to facilitate EPS biosynthesis, which enhanced freeze-drying resistance. The findings concretely prove that the mechanism of GalT regulating EPS biosynthesis plays an important role in protecting lactic acid bacteria from freeze-drying stress.

半乳糖转移酶(GalT)是合成胞外多糖(EPS)的重要酶,EPS是保护细胞免受恶劣环境影响的生物膜的主要聚合物。然而,高泌泌素在应激抵抗中的作用及其调控机制尚不清楚。本研究通过基因工程成功地在嗜酸乳杆菌NCFM中过表达了GalT。重组菌株的GalT活性和冻干存活率显著提高。EPS产量也提高了17.8%,表明抗冻干性与EPS呈正相关。RNA-Seq结果显示,GalT可以调节膜运输系统的通量,关键的糖相关代谢途径,促进群体感应,促进EPS的生物合成,从而增强其抗冻干能力。研究结果具体证明了GalT调控EPS生物合成的机制在保护乳酸菌免受冻干胁迫中起着重要作用。
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引用次数: 5
Special issue: Proteomic approaches used in the identification of food proteins and peptides 特刊:用于食品蛋白质和多肽鉴定的蛋白质组学方法
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100122
Fidel Toldrá, Leticia Mora (Guest Editors)
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引用次数: 0
Characterization of 2S albumin allergenic proteins for anaphylaxis in common buckwheat 普通荞麦过敏反应的2S白蛋白变应原蛋白特征
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100127
Tomoyuki Katsube-Tanaka , Fakhrul Islam Monshi

2S albumin (2SA) is responsible for anaphylaxis following consumption of buckwheat in allergic individuals. To reduce allergen incidents, characterization of 2SA polypeptides is prerequisite, thus was analyzed in this study. Of the five 2S albumin genes (g03, g11, g13, g14, and g28), g03 was seemingly non-functional. The g14 content was 3- and 40-fold higher than that of g11/g28 and g13, respectively. The g11/g28 were more processed to a ∼8 kDa band from a 16 kDa band than g14 in seeds, agreeing with that g11/g28 have high similarity with Fag e 8kD. Meanwhile, anti-g13 produced only a single ∼10 kDa band. Modification of g13 and domain exchange between g13 and g14 suggested that the hydrophobicity of the first domain and the nature of some amino acids in g13 contributed, at least in part, to the lower apparent molecular weight of g13 than expected. Thus, g13 might be an unexplored and noteworthy allergen.

2S白蛋白(2SA)负责过敏个体食用荞麦后的过敏反应。为了减少过敏原的发生,鉴定2SA多肽是先决条件,因此在本研究中进行了分析。在5个2S白蛋白基因(g03、g11、g13、g14和g28)中,g03似乎没有功能。g14含量分别比g11/g28和g13高3倍和40倍。g11/g28比g14在种子中更容易从16 kDa的条带加工成~ 8 kDa的条带,这与g11/g28与Fag e 8kD具有较高的相似性是一致的。而anti-g13只产生一条~ 10 kDa的条带。g13的修饰和g13与g14之间的结构域交换表明,g13中第一结构域的疏水性和一些氨基酸的性质至少是g13表观分子量低于预期的部分原因。因此,g13可能是一种未被探索和值得注意的过敏原。
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引用次数: 4
Development of the engineered “glanded plant and glandless seed” cotton “有腺植物和无腺种子”棉花的工程开发
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100130
Wenhao Gao , Xiefei Zhu , Lingyun Ding , Biyu Xu , Yang Gao , Yu Cheng , Fan Dai , Bingliang Liu , Zhanfeng Si , Lei Fang , Xueying Guan , Shuijin Zhu , Tianzhen Zhang , Yan Hu

After fiber, cottonseed is the second most important by-product of cotton production. However, high concentrations of toxic free gossypol deposited in the glands of the cottonseed greatly hamper its effective usage as food or feed. Here, we developed a cotton line with edible cottonseed by specifically silencing the endogenous expression of GoPGF in the seeds, which led to a glandless phenotype with an ultra-low gossypol content in the seeds and nearly normal gossypol in other parts of the plants. This engineered cotton maintains normal resistance to insect pests, but the gossypol content in the seeds dropped by 98%, and thus, it can be consumed directly as food. The trait of a low gossypol content in the cottonseeds was stable and heritable, while the protein, oil content, and fiber yield or quality were nearly unchanged compared to the transgenic receptor W0. In addition, comparative transcriptome analysis showed that down-regulated genes in the ovules of the glandless cotton were enriched in terpenoid biosynthesis, indicating the underlying relationship between gland formation and gossypol biosynthesis. These results pave the way for the comprehensive utilization of cotton as a fiber, oil, and feed crop in the future.

棉籽是棉花生产中仅次于纤维的第二重要副产品。然而,高浓度的无毒棉酚沉积在棉籽腺体中,极大地阻碍了棉籽作为食物或饲料的有效利用。在这里,我们通过特异性地沉默种子中内源性GoPGF的表达,开发了一个可食用棉籽的棉花品系,这导致了无腺体表型,种子中棉酚含量极低,而植株其他部位的棉酚含量几乎正常。这种转基因棉花保持了正常的抗虫害能力,但种子中的棉酚含量下降了98%,因此,它可以直接作为食物食用。与转基因受体W0相比,棉籽中棉酚含量低的性状具有稳定性和遗传性,而蛋白质、油含量和纤维产量或品质几乎没有变化。此外,比较转录组分析显示,无腺体棉花胚珠中下调的基因在萜类生物合成中富集,表明腺体形成与棉酚生物合成之间存在潜在的关系。这些结果为今后棉花作为纤维、油料和饲料作物的综合利用铺平了道路。
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引用次数: 8
Inhibition kinetics, molecular docking, and stability studies of the effect of papain-generated peptides from palm kernel cake proteins on angiotensin-converting enzyme (ACE) 棕榈仁饼蛋白木瓜蛋白酶肽对血管紧张素转换酶(ACE)抑制动力学、分子对接及稳定性研究
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100147
Mohammad Zarei , Raheleh Ghanbari , Najib Zainal , Reza Ovissipour , Nazamid Saari

Three novel peptide sequences YGIKVGYAIP, GGIF, and GIFE from papain-generated protein hydrolysate of palm kernel cake proteins were used for stability study against ACE, ACE-inhibition kinetics, and molecular docking studies. Results showed that peptide YGIKVGYAIP was degraded, and its ACE-inhibitory activity decreased after 3 h pre-incubation with ACE, while peptides GGIF and GIFE were resistant. However, although the ACE-inhibitory activity of GIFE increased during this time, the ACE inhibitory activity of GGIF decreased after pre-incubation with ACE, indicating that peptide. YGIKVGYAIP and GGIF are substrate-type, whereas GIFE is a true-inhibitor type. Peptide YGIKVGYAIP showed the lowest Ki (0.054 mM) in the inhibition kinetics study compared to GGIF and GIFE, with Ki of 1.27 m M and 18 mM, respectively. In addition, YGIKVGYAIP revealed the lowest Km and Vmax and higher CE in different peptide concentrations, implying that the enzyme catalysis decreased, and peptides had some binding affinity to the enzyme in lower concentrations, which led to reduced catalytic ability. Furthermore, YGIKVGYAIP showed the lowest docking score of −14.733 and 21 interactions with tACE, while GGIF revealed the higher docking score of −8.006 with 15 interactions with tACE.

利用木瓜蛋白酶水解棕榈仁饼蛋白生成的三个新肽序列YGIKVGYAIP、GGIF和GIFE进行ACE稳定性研究、ACE抑制动力学和分子对接研究。结果表明,肽YGIKVGYAIP被降解,ACE预孵育3 h后其抑制ACE活性下降,而肽GGIF和GIFE具有抗性。然而,尽管在此期间GIFE的ACE抑制活性增加,但ACE预孵育后GGIF的ACE抑制活性下降,表明肽。YGIKVGYAIP和GGIF为底物型,而GIFE为真抑制剂型。在抑制动力学研究中,与GGIF和gifp相比,肽YGIKVGYAIP的Ki最低(0.054 mM), Ki分别为1.27 m m和18 mM。此外,YGIKVGYAIP在不同多肽浓度下Km和Vmax最低,CE较高,表明酶的催化作用减弱,低浓度下多肽与酶具有一定的结合亲和力,导致酶的催化能力降低。此外,YGIKVGYAIP的对接得分最低,为−14.733,与tACE交互21次;而GGIF的对接得分最高,为−8.006,与tACE交互15次。
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引用次数: 8
Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping 豌豆和扁豆7S球蛋白晶体结构与比较免疫球蛋白表位定位
IF 3.3 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2022-12-30 DOI: 10.1016/j.fochms.2022.100146
Kelly A. Robinson , Antony D. St-Jacques , Isabella D. Bakestani, Benjamin A.G. Beavington, Michele C. Loewen

Legumes represent an affordable high protein, nutrient dense food source. However, the vast majority of legume crops contain proteins that are known allergens for susceptible individuals. These include proteins from the 7S globulin family, which comprise a vast majority of seed storage proteins. Here, the crystal structures of 7S globulins from Pisum sativum L. (pea) and Lens culinaris Medicus (lentil) are presented for the first time, including pea vicillin and convicilin, and lentil vicilin. All three structures maintain the expected 7S globulin fold, with trimeric quaternary structure and monomers comprised of β-barrel N- and C-modules. The potential impact of sequence differences on structure and packing in the different crystal space groups is noted, with potential relevance to packing upon seed deposition. Mapping on the obtained crystal structures highlights significant Ig epitope overlap between pea, lentil, peanut and soya bean and significant coverage of the entire seed storage protein, emphasizing the challenge in addressing food allergies. How recently developed biologicals might be refined to be more effective, or how these seed storage proteins might be modified in planta to be less immuno-reactive remain challenges for the future. With legumes representing an affordable, high protein, nutrient dense food source, this work will enable important research in the context of global food security and human health on an ongoing basis.

豆类是一种负担得起的高蛋白、营养丰富的食物来源。然而,绝大多数豆类作物含有已知易感个体的过敏原蛋白质。其中包括来自7S球蛋白家族的蛋白质,它构成了绝大多数种子储存蛋白。本文首次报道了豌豆(Pisum sativum L.)和扁豆(Lens culinaris Medicus)中7S球蛋白的晶体结构,包括豌豆维西林、豌豆维西林和扁豆维西林。所有这三种结构都保持预期的7S球蛋白折叠,具有三聚体四元结构和由β-桶N和c模块组成的单体。序列差异对不同晶体空间群结构和堆积的潜在影响被注意到,与种子沉积时堆积的潜在关联。对获得的晶体结构进行绘图,突出了豌豆、扁豆、花生和大豆之间显著的Ig表位重叠,以及整个种子储存蛋白的显著覆盖,强调了解决食物过敏的挑战。如何将最近开发的生物制剂精制得更有效,或者如何在植物中对这些种子储存蛋白进行修饰以降低免疫反应性,这些都是未来的挑战。由于豆类是一种负担得起的高蛋白、营养丰富的食物来源,这项工作将使全球粮食安全和人类健康方面的重要研究能够持续进行。
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引用次数: 2
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Food Chemistry Molecular Sciences
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