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Neural heterogeneity enables adaptive encoding of time sequences. 神经异质性使时间序列的自适应编码成为可能。
IF 5.8 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-11-24 DOI: 10.1038/s42005-025-02408-3
Raphaël Lafond-Mercier, Leonard Maler, Avner Wallach, André Longtin

The timing mechanisms in biological systems operate across a vast range of scales, from microsecond precision for sound localization to annual cycles. A key open question concerns the mechanisms for encoding intermediate time intervals-hundreds of milliseconds to minutes-that are essential for navigation, communication, memory, and prediction. Here we present a theoretical framework that explains how neurons can represent such intervals using a common biophysical property: neural fatigue, where activity diminishes during sustained stimulation. Our Bayesian framework combines parametrically heterogeneous stochastic dynamical modeling with interval priors to predict available timing information independent of the actual decoding mechanism. We find that a trade-off emerges between accurately representing the most recent interval and retaining information about previous ones. We show that cellular diversity is not just tolerated but required to encode sequences of time intervals. Our work highlights the computational role of biological heterogeneity in shaping memory for time, with implications for understanding temporal processing in neural circuits.

生物系统中的计时机制在很大范围内运作,从声音定位的微秒精度到年周期。一个关键的开放问题涉及到中间时间间隔(数百毫秒到几分钟)的编码机制,这对导航、通信、记忆和预测至关重要。在这里,我们提出了一个理论框架,解释了神经元如何使用一个共同的生物物理特性来表示这样的间隔:神经疲劳,在持续刺激期间活动减弱。我们的贝叶斯框架结合了参数异构随机动态建模和区间先验来预测独立于实际解码机制的可用时序信息。我们发现,在准确地表示最近的间隔和保留以前的间隔信息之间出现了一种权衡。我们表明,细胞多样性不仅是可容忍的,而且是编码时间间隔序列所必需的。我们的工作强调了生物异质性在形成时间记忆中的计算作用,这对理解神经回路中的时间处理具有重要意义。
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引用次数: 0
Controlling noise with self-organized resetting. 用自组织复位控制噪声。
IF 5.4 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-02-12 DOI: 10.1038/s42005-025-01985-7
Felix J Meigel, Steffen Rulands

Biological systems often consist of a small number of constituents and are therefore inherently noisy. To function effectively, these systems must employ mechanisms to constrain the accumulation of noise. Such mechanisms have been extensively studied and comprise the constraint by external forces, nonlinear interactions, or the resetting of the system to a predefined state. Here, we propose a fourth paradigm for noise constraint: self-organized resetting, where the resetting rate and position emerge from self-organization through time-discrete interactions. We study general properties of self-organized resetting systems using the paradigmatic example of cooperative resetting, where random pairs of Brownian particles are reset to their respective average. We demonstrate that such systems undergo a delocalization phase transition, separating regimes of constrained and unconstrained noise accumulation. Additionally, we show that systems with self-organized resetting can adapt to external forces and optimize search behavior for reaching target values. Self-organized resetting has various applications in nature and technology, which we demonstrate in the context of sexual interactions in fungi and spatial dispersion in shared mobility services. This work opens routes into the application of self-organized resetting across various systems in biology and technology.

生物系统通常由少数成分组成,因此固有地有噪声。为了有效地发挥作用,这些系统必须采用限制噪声积累的机制。这种机制已被广泛研究,包括外力约束、非线性相互作用或系统复位到预定义状态。在这里,我们提出了噪声约束的第四种范式:自组织重置,其中重置率和位置通过时间离散的相互作用从自组织中产生。我们利用协作重置的范例研究了自组织重置系统的一般性质,其中随机的布朗粒子对被重置到它们各自的平均值。我们证明了这样的系统经历了一个离域相变,分离了约束和无约束噪声积累的制度。此外,我们表明具有自组织重置的系统可以适应外部力量并优化搜索行为以达到目标值。自组织重置在自然和技术中有多种应用,我们在真菌的性相互作用和共享移动服务的空间分散的背景下证明了这一点。这项工作为生物和技术中各种系统的自组织重置应用开辟了道路。
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引用次数: 0
High-purity and stable single-photon emission in bilayer WSe2 via phonon-assisted excitation. 双分子层WSe2声子辅助激发的高纯度稳定单光子发射。
IF 5.4 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-04-14 DOI: 10.1038/s42005-025-02080-7
Claudia Piccinini, Athanasios Paralikis, José Ferreira Neto, Abdulmalik A Madigawa, Paweł Wyborski, Vikas Remesh, Luca Vannucci, Niels Gregersen, Battulga Munkhbat

The excitation scheme is essential for single-photon sources, as it governs exciton preparation, decay dynamics, and the spectral diffusion of emitted photons. While phonon-assisted excitation has shown promise in other quantum emitter platforms, its proper implementation and systematic comparison with alternative excitation schemes have not yet been demonstrated in transition metal dichalcogenide (TMD) quantum emitters. Here, we investigate the impact of various optical excitation strategies on the single-photon emission properties of bilayer WSe2 quantum emitters. Based on our theoretical predictions for the exciton preparation fidelity, we compare the excitation via the longitudinal acoustic and breathing phonon modes to conventional above-band and near-resonance excitations. Under acoustic phonon-assisted excitation, we achieve narrow single-photon emission with a reduced spectral diffusion of 0.0129 nm, a 1.8-fold improvement over above-band excitation. Additionally, excitation through breathing-phonon mode yields a high purity of 0.947 ± 0.079  and reduces the decay time by over an order of magnitude, reaching (1.33 ± 0.04) ns. Our comprehensive study demonstrates the crucial role of phonon-assisted excitation in optimizing the performance of WSe2-based quantum emitters, providing valuable insights for the development of single-photon sources for quantum photonics applications.

激发方案对于单光子源来说是必不可少的,因为它控制着激子的制备、衰变动力学和发射光子的光谱扩散。虽然声子辅助激发在其他量子发射器平台上已经显示出前景,但在过渡金属二硫化物(TMD)量子发射器中尚未证明其正确实施和与其他激励方案的系统比较。本文研究了不同光激发策略对双层WSe2量子发射体单光子发射特性的影响。基于我们对激子制备保真度的理论预测,我们比较了通过纵向声学和呼吸声子模式的激励与传统的带上和近共振激励。在声子辅助激发下,我们实现了狭窄的单光子发射,光谱扩散降低了0.0129 nm,比带上激发提高了1.8倍。此外,通过呼吸声子模式激发可获得0.947±0.079的高纯度,并将衰减时间缩短了一个数量级以上,达到(1.33±0.04)ns。我们的综合研究证明了声子辅助激发在优化基于wse2的量子发射体性能方面的关键作用,为量子光子学应用的单光子源的开发提供了有价值的见解。
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引用次数: 0
Dissipation-induced non-equilibrium phases with temporal and spatial order. 耗散诱导非平衡相的时空顺序。
IF 5.4 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-05-22 DOI: 10.1038/s42005-025-02113-1
Zhao Zhang, Davide Dreon, Tilman Esslinger, Dieter Jaksch, Berislav Buca, Tobias Donner

Understanding spatial and temporal order in many-body systems is a key challenge, particularly in out-of-equilibrium settings. A major hurdle is developing controlled model systems to study these phases. We propose an experiment with a driven quantum gas coupled to a dissipative optical cavity, realizing a non-equilibrium phase diagram featuring both spatial and temporal order. The system's control parameter is the detuning between the drive frequency and cavity resonance. Negative detunings yield a spatially ordered phase, while positive detunings produce phases with both spatial order and persistent oscillations, forming dissipative spatio-temporal lattices. We also identify a phase where the dynamics dephase, leading to chaotic behavior. Numerical and analytical evidence supports these superradiant phases, showing that the spatio-temporal lattice originates from cavity dissipation. The atoms experience accelerated transport, either via uniform acceleration or abrupt momentum transitions. Our work provides insights into temporal phases of matter not possible at equilibrium.

理解多体系统的空间和时间秩序是一个关键的挑战,特别是在不平衡的情况下。一个主要的障碍是开发受控模型系统来研究这些阶段。我们提出了一个将驱动量子气体耦合到耗散光腔的实验,实现了具有空间和时间顺序的非平衡相图。系统的控制参数是驱动频率与腔谐振之间的失谐。负失谐产生空间有序的相位,而正失谐产生空间有序和持续振荡的相位,形成耗散的时空晶格。我们还确定了动力学失相的阶段,导致混沌行为。数值和分析证据支持这些超辐射相位,表明时空晶格起源于空腔耗散。原子通过均匀加速或突然动量转变经历加速输运。我们的工作提供了对不可能处于平衡状态的物质的时间相的见解。
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引用次数: 0
Typical thermalization of low-entanglement states. 典型的低纠缠态热化。
IF 5.4 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-07-17 DOI: 10.1038/s42005-025-02161-7
Christian Bertoni, Clara Wassner, Giacomo Guarnieri, Jens Eisert

Proving thermalization from the unitary evolution of closed quantum systems is one of the oldest questions that is still only partially resolved. Efforts led to various versions of the eigenstate thermalization hypothesis (ETH), which implies thermalization under certain conditions. Whether the ETH holds in specific systems is however difficult to verify from the microscopic description of the system. In this work, we focus on thermalization under local Hamiltonians of low-entanglement initial states, which are operationally accessible in many natural physical settings, including schemes for testing thermalization in experiments and quantum simulators. We prove thermalization of these states under precise conditions that have operational significance. More specifically, motivated by arguments of unavoidable finite resolution, we define a random energy smoothing on local Hamiltonians that leads to local thermalization when the initial state has low entanglement. Finally we show that this transformation affects neither the Gibbs state locally nor, under generic smoothness conditions on the spectrum, the short-time dynamics.

从封闭量子系统的统一演化中证明热化是最古老的问题之一,至今仍只得到部分解决。这些努力导致了本征态热化假说(ETH)的各种版本,这意味着在某些条件下的热化。然而,从系统的微观描述来验证ETH是否在特定系统中成立是困难的。在这项工作中,我们专注于低纠缠初始态的局部哈密顿量下的热化,这在许多自然物理环境中都是可操作的,包括在实验和量子模拟器中测试热化的方案。我们在精确的条件下证明了这些状态的热化,这具有实际意义。更具体地说,由于不可避免的有限分辨率的论点,我们定义了局部哈密顿量上的随机能量平滑,当初始状态具有低纠缠时导致局部热化。最后,我们证明了这种变换既不影响局部吉布斯态,也不影响谱上一般平滑条件下的短时动力学。
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引用次数: 0
The role of spectator modes in the quantum-logic spectroscopy of single trapped molecular ions. 旁观者模式在单捕获分子离子的量子逻辑光谱中的作用。
IF 5.8 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-11-25 DOI: 10.1038/s42005-025-02373-x
Mikolaj Roguski, Aleksandr Shlykov, Ziv Meir, Stefan Willitsch

Quantum-logic spectroscopy has become an increasingly important tool for the state detection and readout of trapped atomic and molecular ions which do not possess easily accessible closed-cycling optical transitions. In this approach, the internal state of the target ion is mapped onto a co-trapped auxiliary ion. This mapping is typically mediated by normal modes of motion of the two-ion Coulomb crystal in the trap. The present study investigates the role of spectator modes not directly involved in a measurement protocol relying on a state-dependent optical-dipole force. We identify a Debye-Waller-type effect that modifies the response of the two-ion string to the force. We show that cooling the spectator modes of the string allows for the detection of the rovibrational ground state of an N 2 + molecular ion with a computed statistical fidelity exceeding 99.99%, improving on previous experiments by more than an order of magnitude while also halving the experimental time. This enhanced sensitivity enables the simultaneous identification of multiple rotational states with markedly weaker signals.

量子逻辑光谱已成为一种越来越重要的工具,用于状态检测和读出被捕获的原子和分子离子,这些离子不具有容易获得的闭循环光学跃迁。在这种方法中,目标离子的内部状态被映射到一个共捕获的辅助离子上。这种映射通常是由阱中两离子库仑晶体的正常运动模式介导的。本研究探讨了不直接参与依赖于状态依赖的光偶极子力的测量协议的观看模式的作用。我们确定了一种德拜-沃勒效应,它改变了双离子弦对力的响应。我们表明,冷却弦的旁观者模式允许检测n2 +分子离子的旋转振动基态,计算的统计保真度超过99.99%,比以前的实验提高了一个数量级以上,同时也使实验时间缩短了一半。这种增强的灵敏度使得同时识别多个旋转状态明显较弱的信号。
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引用次数: 0
Unravel the rotational and translational behavior of a single squirmer in flexible polymer solutions at different Reynolds numbers. 揭示在不同雷诺数下柔性聚合物溶液中单个扭体的旋转和平动行为。
IF 5.8 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-12-01 DOI: 10.1038/s42005-025-02391-9
Kai Qi, Yuan Zhou, Marco De Corato, Kevin Stratford, Ignacio Pagonabarraga

Microorganisms such as bacteria and algae navigate complex fluids, where their dynamics are vital for medical and industrial applications. However, the influence of the Reynolds number (Re) on the transport and rotational behavior of microswimmers in viscoelastic media remains poorly understood. Here, we investigate these effects for a model squirmer in flexible polymer solutions across a range of Re using Lattice Boltzmann simulations. The interaction between swimmer activity and polymer heterogeneity strongly affects behavior, with rotational enhancement up to 1400-fold and reduced self-propulsion and diffusivity for squirmers. These effects result from hydrodynamic and mechanical interactions: polymers wrap ahead of pushers and accumulate behind pullers, enhancing rotation while hindering translation through forces and torques from direct contacts or asymmetric flows. The influence of Re and squirmer-polymer boundary conditions (no-slip vs. repulsive) is also examined. Notably, no-slip conditions intensify effects above a critical Reynolds number ( Re c = 0.2 ). Below this value, stronger viscous drag minimizes differences. Our findings emphasize the crucial role of polymer-swimmer interactions in shaping microswimmer behavior in viscoelastic media, informing microrobotic design in complex environments.

细菌和藻类等微生物在复杂的流体中导航,它们的动力学对医疗和工业应用至关重要。然而,雷诺数(Re)对微游泳体在粘弹性介质中的输运和旋转行为的影响仍然知之甚少。在这里,我们使用晶格玻尔兹曼模拟研究了在Re范围内柔性聚合物溶液中模型蠕动的这些影响。游动活性和聚合物非均质性之间的相互作用强烈地影响着游动行为,游动体的旋转增强高达1400倍,而游动体的自推进力和扩散率降低。这些效应是由流体动力学和机械相互作用造成的:聚合物包裹在推手前面,积聚在推手后面,增强了旋转,同时阻碍了直接接触或不对称流动产生的力和扭矩的平移。Re和蠕动聚合物边界条件(无滑移和排斥)的影响也进行了研究。值得注意的是,在临界雷诺数(Re c = 0.2)以上,无滑移条件会加剧影响。低于此值,更强的粘性阻力使差异最小化。我们的研究结果强调了聚合物-游泳者相互作用在粘弹性介质中塑造微游泳者行为的关键作用,为复杂环境中的微机器人设计提供了信息。
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引用次数: 0
Fast nonlinear integration drives accurate encoding of input information in large multiscale systems. 在大型多尺度系统中,快速非线性积分驱动输入信息的精确编码。
IF 5.8 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-11-18 DOI: 10.1038/s42005-025-02339-z
Giorgio Nicoletti, Daniel Maria Busiello

Biological and artificial systems encode information through complex nonlinear operations across multiple timescales. A clear understanding of the interplay between this multiscale structure and the nature of nonlinearities at play is, however, missing. Here, we study a general model where the input signal is propagated to an output unit through a processing layer via nonlinear activation functions. We focus on two widely implemented paradigms: nonlinear summation, where signals are first nonlinearly transformed and then combined; nonlinear integration, where they are combined first and then transformed. We find that fast-processing capabilities systematically enhance input-output mutual information, and nonlinear integration outperforms summation in large systems. Conversely, a nontrivial interplay between the two strategies emerges in lower dimensions as a function of interaction strength, heterogeneity, and sparsity of conections between the units. Finally, we reveal a tradeoff between input and processing sizes in strong-coupling regimes. Our results shed light on relevant features of nonlinear information processing with implications for both biological and artificial systems.

生物和人工系统通过跨多个时间尺度的复杂非线性操作来编码信息。然而,对这种多尺度结构和非线性性质之间的相互作用的清晰理解是缺失的。在这里,我们研究了一个通用模型,其中输入信号通过非线性激活函数通过处理层传播到输出单元。我们关注两种广泛实现的范式:非线性求和,其中信号首先进行非线性变换,然后组合;非线性积分,它们先组合然后变换。我们发现快速处理能力系统地增强了输入输出互信息,并且在大系统中非线性积分优于求和。相反,两种策略之间的重要相互作用在较低的维度上表现为相互作用强度、异质性和单元之间连接的稀疏性的函数。最后,我们揭示了在强耦合机制中输入和处理大小之间的权衡。我们的研究结果揭示了非线性信息处理的相关特征,对生物和人工系统都有影响。
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引用次数: 0
Asymmetric limits on timely interventions from noisy epidemic data. 嘈杂的流行病数据对及时干预的不对称限制。
IF 5.8 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-11-19 DOI: 10.1038/s42005-025-02358-w
Kris V Parag, Ben Lambert, Christl A Donnelly, Sandor Beregi

Deciding on when to initiate or relax an intervention in response to an emerging infectious disease is both difficult and important. Uncertainties from noise in epidemiological surveillance data must be hedged against the potentially unknown and variable costs of false alarms and delayed actions. Here, we clarify and quantify how case under-reporting and latencies in case ascertainment, which are predominant surveillance noise sources, can restrict the timeliness of decision-making. Decisions are modelled as binary choices between responding or not that are informed by reported case curves or transmissibility estimates from those curves. Optimal responses are triggered by thresholds on case numbers or estimated confidence levels, with thresholds set by the costs of the various choices. We show that, for growing epidemics, both noise sources induce additive delays on hitting any case-based thresholds and multiplicative reductions in our confidence in estimated reproduction numbers or growth rates. However, for declining epidemics, these noise sources have counteracting effects on case data and limited cumulative impact on transmissibility estimates. We find that this asymmetry persists even if more sophisticated feedback control algorithms that consider the longer-term effects of interventions are employed. Standard surveillance data, therefore, provide substantially weaker support for deciding when to initiate a control action or intervention than for determining when to relax it. This information bottleneck during epidemic growth may justify proactive intervention choices.

决定何时启动或放松干预措施以应对新出现的传染病既困难又重要。必须对流行病学监测数据中噪声带来的不确定性进行对冲,以防范误报和延迟行动可能带来的未知和可变成本。在这里,我们澄清和量化病例漏报和病例确定的延迟,这是主要的监测噪声源,如何限制决策的及时性。决策建模为响应或不响应之间的二元选择,这是根据报告的病例曲线或这些曲线的传播率估计得出的。最优响应由案例数或估计置信水平的阈值触发,阈值由各种选择的成本设定。我们表明,对于不断增长的流行病,两种噪声源在达到任何基于病例的阈值时都会导致累加性延迟,并导致我们对估计繁殖数量或增长率的信心倍增性降低。然而,对于下降的流行病,这些噪声源对病例数据具有抵消作用,对传播率估计的累积影响有限。我们发现,即使采用了考虑干预措施长期影响的更复杂的反馈控制算法,这种不对称仍然存在。因此,标准监测数据在决定何时启动控制行动或干预方面提供的支持远远弱于决定何时放松控制行动或干预。流行病发展期间的这一信息瓶颈可能证明采取主动干预措施是合理的。
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引用次数: 0
Elf autoencoder for unsupervised exploration of flat-band materials using electronic band structure fingerprints. Elf自动编码器用于无监督探索平面带材料使用电子带结构指纹。
IF 5.4 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY Pub Date : 2025-01-01 Epub Date: 2025-01-17 DOI: 10.1038/s42005-025-01936-2
Henry Kelbrick Pentz, Thomas Warford, Ivan Timokhin, Hongpeng Zhou, Qian Yang, Anupam Bhattacharya, Artem Mishchenko

Two-dimensional materials with flat electronic bands are promising for realising exotic quantum phenomena such as unconventional superconductivity and nontrivial topology. However, exploring their vast chemical space is a significant challenge. Here we introduce elf, an unsupervised convolutional autoencoder that encodes electronic band structure images into fingerprint vectors, enabling the autonomous clustering of materials by electronic properties beyond traditional chemical paradigms. Unsupervised visualisation of the fingerprint space then uncovers hidden chemical trends and identifies promising candidates based on similarities to well-studied exemplars. This approach complements high-throughput ab initio methods by rapidly screening candidates and guiding further investigations into the mechanisms underlying flat-band physics. The elf autoencoder is a powerful tool for autonomous discovery of unexplored flat-band materials, enabling unbiased identification of compounds with desirable electronic properties across the 2D chemical space.

具有平面电子带的二维材料有望实现非常规超导和非平凡拓扑等奇异量子现象。然而,探索其广阔的化学空间是一项重大挑战。本文介绍了一种无监督卷积自编码器elf,它将电子带结构图像编码为指纹向量,从而超越传统的化学范式,通过电子特性实现材料的自主聚类。然后,对指纹空间进行无监督的可视化,揭示隐藏的化学趋势,并根据与经过充分研究的样本的相似性识别出有希望的候选者。这种方法通过快速筛选候选者和指导进一步研究平带物理机制来补充高通量从头算方法。elf自动编码器是一个强大的工具,用于自主发现未开发的平带材料,能够在二维化学空间中无偏地识别具有理想电子特性的化合物。
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引用次数: 0
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Communications Physics
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