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Principal component analysis of JNPT lines of rice for the important traits responsible for yield and quality 水稻JNPT品系的主成分分析是决定产量和品质的重要性状
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2021-03-25 DOI: 10.31742/ijgpb.81.1.14
S. Rahangdale, Y. Singh, P. K. Upadhyay, G. K. Koutu
In present study, 67 JNPT (Jawahar New Plant Type) lines were evaluated for 28 morphological and quality traits planted in RCBD with three replications. Principal Component Analysis (PCA) revealed that out of 28, only eight PCs exhibited more than 1.0 eigen value and showed about 81.84% total variability. For selecting the high yielding genotypes in rice, the characters viz., spikelet density, spikelet fertility, number of tillers plant–1and panicle weight plant–1 may be considered. On the basis of high PC score ten most prominent lines namely JNPT-1059-9, JNPT-1059- 10, JNPT1062-1, JNPT-1062-2, JNPT-1064-9, JNPT-1065-1, JNPT-1065-2, JNPT1065-3, JNPT-1066-52 and JNPT-1068- 65 were identified for yield and quality traits.
本研究对67个JNPT (Jawahar New Plant Type)品系在RCBD上进行了3个重复的28个形态和品质性状的评价。主成分分析(PCA)表明,28个样本中只有8个样本的特征值大于1.0,变异率约为81.84%。在选择水稻高产基因型时,可考虑小穗密度、小穗育性、分蘖数和穗重等性状。在PC得分较高的基础上,鉴定了产量和品质性状最突出的10个品系:JNPT-1059-9、JNPT-1059- 10、JNPT1062-1、JNPT-1062-2、JNPT-1064-9、JNPT-1065-1、JNPT-1065-2、JNPT1065-3、JNPT-1066-52和JNPT-1068- 65。
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引用次数: 6
Genotype environment interaction analysis for fruit yield in okra (Abelmoschus esculentus L.) under alkaline environments 碱性环境下秋葵产量的基因型-环境相互作用分析
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2021-03-25 DOI: 10.31742/ijgpb.81.1.11
S. Sanwal, A. Mann, Hari Kesh, G. Kaur, Raj Kumar, A. Rai
Twenty four Okra genotypes were evaluated for marketable fruit yield and its related traits for genotype environment interaction during 2015-16 and 2016-17. The genotypes were exposed to alkaline environment with a pH range of 8.0±0.2, 8.5±0.2, 9.0±0.2 and 9.5±0.2. A significant level of deviation in expression of different traits was observed in all the genotypes with increasing pH. Based on Additive Main Effects and Multiplicative Interaction (AMMI), Genotype and Genotype Environment Interaction (GGE) biplot, Wrick’s ecovalence (Wi2 ), AMMI Stability Value (ASV) and Yield Stability Index (YSi) stable genotypes with high fruit yield were identified over the eight environments. The combined AMMI analysis of variance indicated that genotype main effect, environment and genotype-by-environment interaction effects showed variation of 19.83%, 63.07% and 17.10%, respectively for fruit yield. On the basis of different stability measures, VRO-112, VRO-110, Kashi Kranti, VROB178, AE-70 and VRO-108 were differentiated as high yielding and stable genotypes over the tested environments. This study will be helpful for selecting alkali tolerant okra parents for further breeding programme and recommending the suitable genotypes for alkalinity prone area
对24个秋葵基因型在2015-16和2016-17年间的可销果产量及其相关性状进行了基因型-环境互作评价。基因型分别暴露于pH为8.0±0.2、8.5±0.2、9.0±0.2和9.5±0.2的碱性环境中。通过加性主效应与倍增相互作用(AMMI)、基因型与基因型环境相互作用(GGE)双图,确定了8种环境下高产的Wrick生态价(Wi2)、AMMI稳定值(ASV)和产量稳定指数(YSi)。联合AMMI方差分析表明,基因型主效应、环境效应和基因型与环境互作效应对果实产量的影响分别为19.83%、63.07%和17.10%。根据不同的稳定性措施,VRO-112、VRO-110、Kashi Kranti、VROB178、AE-70和VRO-108在不同的测试环境中被区分为高产和稳定的基因型。本研究将为今后选育耐碱秋葵亲本和推荐适合碱性易发地区的基因型提供依据
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引用次数: 7
Buckwheat: A critical approach towards assessment of its potential as a super crop 荞麦:一种评估其作为超级作物潜力的关键方法
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2021-03-25 DOI: 10.31742/ijgpb.81.1.1
N. Chrungoo, Upasna Chettry
Buckwheat has attracted considerable interest amongst the global scientific community due to its nutritional and pharmaceutical properties. It is a low input crop whose cultivation has persisted through centuries of civilization in almost every country where cereals were cultivated. The crop is an important source of rutin, an important flavonoid which is known to have cardioprotective, vasoprotective, antihypertensive, anti-inflammation, cytoprotective and anti-diabetic properties. Grains of buckwheat are a rich source of protein with a balanced amino acid composition, gluten free flour, dietary fibre, vitamins, resistant starch, phytosterols, fagopyrins, fagopyritols and phenolic compounds. Buckwheat is a short season crop which completes its life cycle in 70-90 days and can grow in wide range of environmental conditions including marginal lands and rocky, poorly tilled soils. The protein content in buckwheat flour is higher than in commonly used cereals such as rice, wheat, millet, sorghum and maize. Buckwheat grain protein is rich in lysine and arginine, which are generally limiting in other cereals. Because of a low Lys/ Arg and Met/Gly ratio, buckwheat protein has strong hypolipidemic activity. While Buckwheat is considered as a healthy food because of its nutraceutical properties, low yields due to seed shattering because of pedicel breaking and heterozygosity due to self-incompatibility as a consequence of dimorphic heterostylism have always remained major problems in achieving large scale incorporation of common buckwheat (Fagopyrum esculentum) in the agricultural portfolio. The present review highlights the multicore potential of buckwheat as a super crop to meet the challenges of food and nutritional security.
荞麦因其营养和药用特性而引起了全球科学界的极大兴趣。它是一种低投入的作物,在几乎每个种植谷物的国家,其种植已经持续了几个世纪的文明。该作物是芦丁的重要来源,芦丁是一种重要的类黄酮,已知具有心脏保护、血管保护、降压、抗炎、细胞保护和抗糖尿病特性。荞麦颗粒富含蛋白质,氨基酸组成平衡,无麸质面粉、膳食纤维、维生素、抗性淀粉、植物甾醇、荞麦蛋白、荞麦糖醇和酚类化合物。荞麦是一种短季作物,在70-90天内完成其生命周期,可以在各种环境条件下生长,包括边缘土地和岩石、贫瘠的土壤。荞麦面中的蛋白质含量高于大米、小麦、小米、高粱和玉米等常用谷物。荞麦蛋白富含赖氨酸和精氨酸,这在其他谷物中通常是有限的。荞麦蛋白由于Lys/Arg和Met/Gly比值低,具有较强的降血脂活性。尽管荞麦因其营养特性而被认为是一种健康食品,但在实现普通荞麦(Fagopyrum esculentum)大规模纳入农业投资组合的过程中,由于断蒂而导致的种子破碎和由于二型异基因导致的自交不亲和而导致的杂合性导致的低产量一直是主要问题。本综述强调了荞麦作为一种超级作物在应对粮食和营养安全挑战方面的多核心潜力。
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引用次数: 7
Characterizing the diversity of grain phytic acid content in Indian rice landraces by multivariate genetic analyses 印度地方稻籽粒植酸含量多样性的多变量遗传分析
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2021-03-25 DOI: 10.31742/ijgpb.81.1.3
Prem Chand Gyani, H. Bollinedi, S. G. Krishnan, K. Vinod, P. Bhowmick, M. Nagarajan, N. Singh, R. Ellur, Ashok K. Singh
Phytic acid (PA) acts as chelator of cationic mineral elements iron (Fe) and zinc (Zn) and obstructs their absorption in the human gut. We have evaluated a set of 162 traditional rice landraces for phytic acid phosphorus (PA-P), inorganic phosphorus (Pi) and total phosphorus (TP). Wide variability was observed for PA-P, Pi and TP ranging from 1.12 to 3 mg/g, 0.004 to 0.16 mg/g and 1.17 to 3.04 mg/g respectively. The mineral micronutrients, Fe and Zn were not in correlation with PA-P, Pi and TP implicating the possibility of their independent improvement while PAP showed a significant positive correlation with TP and significant negative correlation with Pi. Principal component analysis (PCA) identified two principal components PC1 and PC2, explaining 50.6 % and 32.1 % of the total variation, respectively. Cluster analysis grouped the accessions into four clusters. The study has also led to the identification of promising donors such as P1490 and Gowri with low PA content to be utilized in rice biofortification programmes.
植酸(PA)作为阳离子矿物元素铁(Fe)和锌(Zn)的螯合剂,阻碍它们在人体肠道的吸收。对162个传统地方水稻品种的植酸磷(PA-P)、无机磷(Pi)和总磷(TP)进行了测定。PA-P、Pi和TP的变异范围分别为1.12 ~ 3 mg/g、0.004 ~ 0.16 mg/g和1.17 ~ 3.04 mg/g。微量矿物质元素Fe、Zn与pa、p、Pi、TP不相关,提示它们可能独立改善;PAP与TP呈显著正相关,与Pi呈显著负相关。主成分分析(PCA)鉴定出两个主成分PC1和PC2,分别解释了总变异的50.6%和32.1%。聚类分析将资料分成4类。这项研究还发现了PA含量较低的P1490和Gowri等有希望的供体,可用于水稻生物强化项目。
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引用次数: 1
Differential response of groundnut genotypes for iron (Fe) deficiency chlorosis tolerance and productivity traits under Fe-supplemented and Fe-non-supplemented conditions 补铁和不补铁条件下花生基因型对缺铁性黄化耐性和生产力性状的差异响应
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2021-03-25 DOI: 10.31742/ijgpb.81.1.8
G. K. Naidu, S. K. Pattanashetti, Omesh Kumar, O. Sridevi, Basanagouda C Patil
Groundnut is sensitive to Fe deficiency under alkaline and calcareous soils and exhibits iron deficiency chlorosis (IDC) causing significant reduction in growth and yield. Genotypes were assessed for IDC related traits such as visual chlorosis rating, SPAD chlorophyll meter reading, chlorophyll and active iron (Fe2+) content across five growth stages and also for productivity traits viz., plant height, number of primary branches, number of pods per plant, pod yield, shelling per cent, 100 seed weight and haulm yield. Comparison between Fe-supplemented and Fe-nonsupplemented condition for IDC related traits showed not much difference among IDC tolerant genotypes across all five growth stages, while significant differences among IDC susceptible genotypes were observed. Maximum reduction in pod yield was observed among IDC susceptible genotypes compared to IDC tolerant and moderately tolerant genotypes. However, recently released variety G 2- 52 with moderate tolerance to IDC and higher yield potential recorded higher pod yield both under Fe applied (1754 kgha–1) and non-applied conditions (1544 kgha–1).
花生在碱性和石灰性土壤中对缺铁敏感,表现出缺铁性黄化(IDC),导致生长和产量显著下降。对IDC相关性状的基因型进行了评估,如视觉失绿评级、SPAD叶绿素仪读数、五个生长阶段的叶绿素和活性铁(Fe2+)含量,以及生产力性状,即株高、主枝数量、单株荚数、荚产量、去壳率、百粒重和茎产量。IDC相关性状的补铁和不补铁条件的比较表明,在所有五个生长阶段,耐IDC基因型之间没有太大差异,而易感IDC的基因型之间则存在显著差异。与IDC耐受和中度耐受基因型相比,IDC易感基因型的荚产量下降幅度最大。然而,最近发布的对IDC具有中等耐受性和较高产量潜力的品种G2-52在施用Fe(1754 kgha–1)和未施用Fe(1544 kgha-1)的条件下都记录了较高的荚产量。
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引用次数: 0
R-AMMI-LM: Linear-fit Robust-AMMI model to analyze genotype-by environment interactions R-AMMI-LM:线性拟合鲁棒- ammi模型分析基因型与环境的相互作用
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2021-03-22 DOI: 10.31742/ijgpb.81.1.9
B. Ajay, K. Ramya, R. A. Fiyaz, G. Govindaraj, S. Bera, N. Kumar, K. Gangadhar, Praveen Kona, G. P. Singh, T. Radhakrishnan
Outliers are a common phenomenon when genotypes are evaluated over locations and years under field conditions and such outliers makes studying genotype-environment Interactions difficult. Robust-AMMI models which use a combination of robust fit and robust SVD approaches, denoted as ‘R-AMMI-RLM’ have been proposed to study GEI in presence of such outliers. Instead of ‘R-AMMI-RLM’ we propose a model which uses a combination of linear fit and robust SVD to study GEI in presence of outliers and we denote this model as ‘R-AMMI-LM’. Here we prove that ‘RAMMI-LM’ was superior over ‘R-AMMI-RLM’ as it recorded very low residual sum of squares and low RMSE values. Thus proposed, ‘R-AMMI-LM’ model could explain the GEI more precisely even in presence of outliers.
在野外条件下,在不同地点和年份评估基因型时,异常值是一种常见现象,这种异常值使研究基因型与环境的相互作用变得困难。鲁棒- ammi模型使用鲁棒拟合和鲁棒SVD方法的组合,称为“R-AMMI-RLM”,已被提出用于研究存在此类异常值的GEI。代替“R-AMMI-RLM”,我们提出了一个模型,该模型使用线性拟合和鲁棒SVD的组合来研究存在异常值的GEI,我们将该模型称为“R-AMMI-LM”。在这里,我们证明' RAMMI-LM '优于' R-AMMI-RLM ',因为它记录了非常低的残差平方和和低RMSE值。因此,即使存在异常值,“R-AMMI-LM”模型也可以更精确地解释GEI。
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引用次数: 2
Genetic variation of stem characters in wheat and their relation to physiological characters and yield under drought 干旱条件下小麦茎秆性状的遗传变异及其与生理性状和产量的关系
IF 1 4区 生物学 Q3 Agricultural and Biological Sciences Pub Date : 2020-11-30 DOI: 10.31742/ijgpb.80.4.1
Pooja, Sônia, R. Munjal, Suresh
Stem characters such as stem solidness and stem carbohydrates (water soluble carbohydrates and non-structural carbohydrates estimated as fructan) play an important role in stabilizing grain yield in stressful environments. Ten wheat genotypes were screened for carbohydrate content (Water soluble sugars and fructan) in peduncle along with other stem parameters namely, stem solidness, grain growth rate and stem osmotic potential under irrigated and drought conditions. Data was analyzed for correlation among these parameters along with biomass and yield. The results of present study indicated that stress-tolerant genotype RIL-S1-38 and WH 1235 accumulated higher fructan content in stem and contributed in grain growth rate, reduced osmotic potential and further imparted drought tolerance. Clear differences in stem solidness and fructan content exhibited lesser grain yield reduction under drought condition.
茎固度和茎碳水化合物(水溶性碳水化合物和非结构性碳水化合物,估计为果聚糖)等茎秆性状在逆境条件下稳定籽粒产量中起重要作用。在灌溉和干旱条件下,对10个小麦基因型进行了茎梗碳水化合物含量(水溶性糖和果聚糖)以及茎固度、籽粒生长速率和茎渗透势等茎秆参数的筛选。对这些参数与生物量和产量的相关性进行了分析。结果表明,耐胁迫基因型RIL-S1-38和WH 1235积累了较高的茎部果聚糖含量,有助于提高籽粒生长速度,降低渗透势,进一步提高抗旱性。干旱条件下茎秆结实度和果聚糖含量差异明显,籽粒减产幅度较小。
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引用次数: 0
Comparative study of different non-parametric genomic selection methods under diverse genetic architecture 不同遗传结构下非参数基因组选择方法的比较研究
IF 1 4区 生物学 Q3 Agricultural and Biological Sciences Pub Date : 2020-11-30 DOI: 10.31742/ijgpb.80.4.4
Neeraj Budhlakoti, Anil Rai, D. Mishra, S. Jaggi, Mukesh Kumar, A. Rao
Genomic Selection (GS) is the most prevalent method in today’s scenario to access the genetic merit of individual under study. It selects the candidates for next breeding cycle on the basis of its genetic merit. GS has successfully been used in various plant and animal studies in last decade. Several parametric statistical models have been proposed and being used successfully in various GS studies. However, performance of parametric methods becomes very poor when we have non additive kind of genetic architecture. In such cases, generally performance of non-parametric methods are quite satisfactory as these methods do not require strict statistical assumptions. This article presents comparative performance of few most commonly used non-parametric methods for complex genetic architecture i.e. non-additive, using simulated dataset generated at different level of heritability and varying combination of population size. Among several non-parametric methods, SVM outperformed across a range of genetic architecture.
基因组选择(GS)是当今最普遍的方法,可以获得被研究个体的遗传优势。它根据自己的遗传优势为下一个繁殖周期选择候选者。在过去的十年里,GS已经成功地应用于各种植物和动物研究。已经提出了几种参数统计模型,并在各种GS研究中成功使用。然而,当我们有非加性的遗传结构时,参数方法的性能变得非常差。在这种情况下,非参数方法的性能通常是令人满意的,因为这些方法不需要严格的统计假设。本文介绍了几种最常用的非参数方法对复杂遗传结构的比较性能,即非加性方法,使用在不同遗传力水平和不同群体规模组合下生成的模拟数据集。在几种非参数方法中,SVM在一系列遗传结构中表现出色。
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引用次数: 2
Identification of new resistant sources against downy mildew disease from a selected set of cucumber germplasm and its wild relatives 从黄瓜种质及其野生近缘种质中鉴定抗霜霉病新来源
IF 1 4区 生物学 Q3 Agricultural and Biological Sciences Pub Date : 2020-11-30 DOI: 10.31742/ijgpb.80.4.8
J. Akhtar, D. Gautam, R. Nath, A. Gaikwad, K. V. Bhat, B. Mondal, G. Jat, Asif Iquebal, Badrish Tiwari, S. Archak
This study was undertaken to identify new sources of resistance against downy mildew of cucumber caused by Pseudoperonospora cubensis [(Berk. and Cart.) Rostow]. Pot experiments were conducted with 16 accessions each of Cucumis sativus and C. hardwickii during the years 2017 and 2018 using 12 isolates of P. cubensis representing different agroclimatic zones of India. The accession, IC331627 from Dehradun, Uttarakhand showed plant disease index (PDI) ranging from 5.55-20.35 per cent with an average PDI of 11.56 and 11.87 per cent during the years, 2017 and 2018, respectively. Hence, IC331627 was identified to be resistant against the five isolates of P. cubesis (Pc12, Pc17, Pc19, Pc21 and Pc24) and moderately resistant against one isolate (Pc22). This resistant accession C. hardwickii (IC331627) could be utilized to develop mapping population to map genomic regions conferring the resistance to downy mildew in cucumber.
本研究旨在确定黄瓜霜霉病抗性的新来源。在2017年和2018年期间,使用代表印度不同农业气候区的12个小白菜分离株,对分别为Cucumis sativus和C.hardwickii的16份材料进行了盆栽试验。来自北阿坎德邦德拉敦的IC331627登录显示,植物病害指数(PDI)在5.55-20.35%之间,2017年和2018年的平均PDI分别为11.56%和11.87%。因此,IC331627被鉴定为对五个分离株(Pc12、Pc17、Pc19、Pc21和Pc24)具有抗性,对一个分离株具有中等抗性(Pc22)。该抗性登录号C.hardwickii(IC331627)可用于开发定位群体,以定位赋予黄瓜霜霉病抗性的基因组区域。
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引用次数: 1
Evaluation of bread wheat (Triticum aestivum L.) for terminal heat tolerance 面包小麦(Triticum aestivum L.)的耐热性评价
IF 1 4区 生物学 Q3 PLANT SCIENCES Pub Date : 2020-11-30 DOI: 10.31742/ijgpb.80.4.13
S. Krishna, Priyanka Upadhayay, V. K. Mishra, S. Kujur, Monu Kumar, P. Yadav, Parvin Mahto, Prashant Singh, Ashutosh, Sandeep Sharma, R. Chand
Terminal heat tolerance of 34 wheat genotypes were analyzed for two years. Among 14 traits, canopy temperature, plot yield and days to heading were major components in clustering of genotypes. Three genotypes viz., DBW39, DBW16 and DBW14 had lowest HSI (0.34-0.36) for plot yield and were considered as heat tolerant genotypes by, both, HCA (Hierarchical Cluster Analysis) as well as DA (Discriminant Analysis). These genotypes may serve as potential donors in wheat breeding to improve the terminal heat tolerance.
对34个小麦基因型的耐热性进行了两年的分析。在14个性状中,冠层温度、小区产量和抽穗天数是基因型聚类的主要组成部分。三个基因型,即DBW39、DBW16和DBW14,小区产量的HSI最低(0.34-0.36),并且被HCA(层次聚类分析)和DA(判别分析)都认为是耐热基因型。这些基因型可作为小麦育种的潜在供体,以提高小麦的最终耐热性。
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引用次数: 0
期刊
Indian Journal of Genetics and Plant Breeding
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