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Applying DNA barcoding to identify the cultivated provenance of Fritillaria taipaiensis P. Y. Li and its related species 应用DNA条形码鉴定Fritillaria taipaiensis P. Y. Li及其相关物种的栽培产地
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-01-17 DOI: 10.1016/j.jarmap.2024.100530
Yuze Liang , Jie Zhang , Xue Wang , Tiantian Gao , Haifeng Li , Dequan Zhang

Fritillaria taipaiensis P. Y. Li is one of the original species of Fritillariae Cirrhosae Bulbus (FCB), namely “Chuanbeimu”. It is difficult to identify the cultivated provenance of the FCB based on morphology, because of complexity of its original species. Therefore, it is necessary to develop an efficient molecular method to discriminate these species. In the present study, nine plastid genomes from cultivated F. taipaiensis and its related species were newly obtained using Next-generation sequencing, in addition to ITS sequences from Sanger sequencing. Then, DNA super, universal, and specific barcodes were compared in identifying these cultivation provenances using P-distance, Tree-building, and Online-blast methods. For the Tree-building, all individuals of F. taipaiensis could be successfully identified and DNA super barcode showed the highest success rate (91.67%) and reliability. Moreover, the super barcode could discriminate 88.88% of the individuals of these species except that of F. sichuanica using the Online-blast method in the NCBI database; however, only two individuals of F. taipaiensis were successfully identified using ITS sequences. This study further demonstrated that DNA super barcode based on plastid genome possesses a perfect ability of species discrimination on cultivation provenance of FCB.

Fritillaria taipaiensis P. Y. Li 是 Fritillariae Cirrhosae Bulbus(FCB)的原种之一,即 "川贝母"。由于川贝母原种的复杂性,很难根据形态鉴定川贝母的栽培产地。因此,有必要开发一种有效的分子方法来鉴别这些物种。在本研究中,除了桑格(Sanger)测序法获得的 ITS 序列外,还利用下一代测序法新获得了 9 个栽培太白金星及其相关物种的质粒基因组。然后,使用P-distance、Tree-building和Online-blast方法比较了DNA超级条形码、通用条形码和特异条形码在鉴定这些栽培产地中的作用。在 "建树 "法中,所有的太白金星个体都能被成功识别,DNA 超级条形码的识别成功率(91.67%)和可靠性最高。此外,在 NCBI 数据库中,使用在线突检法,超级条形码可鉴别出除四川蛙以外的 88.88% 的物种个体;但使用 ITS 序列仅成功鉴别出两个四川蛙个体。该研究进一步证明,基于质粒基因组的 DNA 超级条形码对 FCB 的栽培产地具有完美的物种鉴别能力。
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引用次数: 0
Valorization of wild thyme (Thymus serpyllum L.) herbal dust by supercritical fluid extraction – Experiments and modeling 通过超临界流体萃取实现野生百里香(Thymus serpyllum L.)药草灰尘的价值化--实验与建模
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-01-11 DOI: 10.1016/j.jarmap.2024.100529
Živan Mrkonjić , Lato Pezo , Mirjana Brdar , Dušan Rakić , Ivana Lazarević Mrkonjić , Nemanja Teslić , Zoran Zeković , Branimir Pavlić

The aim of this study was to develop five empirical and three mass-transfer based models for fitting the T. serpyllum SFE process. Additionally, the determination of the effect of SFE parameters (pressure, temperature, CO2 flow rate and mean particle size) on kinetic curves and model parameters was investigated. Among the selected models, all empirical and mass-transfer models provided adequate fit with experimental data. However, mass-transfer model VIII has proved to fit the experimental results accordingly and has shown that the most influential parameters were pressure and CO2 flow rate. The pressure and CO2 flow rate exhibited positive effect, while the temperature had rather negative impact on Y. In addition, the initial slopes of Model VIII were calculated in order to increase the efficiency and reduce unnecessary process costs.

本研究的目的是建立五个经验模型和三个基于质量转移的模型,用于拟合蛇莓 SFE 过程。此外,还研究了 SFE 参数(压力、温度、二氧化碳流速和平均粒径)对动力学曲线和模型参数的影响。在所选模型中,所有经验模型和传质模型都与实验数据充分拟合。然而,质量传递模型 VIII 与实验结果的拟合度很高,而且表明影响最大的参数是压力和二氧化碳流速。此外,还计算了模型 VIII 的初始斜率,以提高效率和减少不必要的工艺成本。
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引用次数: 0
Unleashing the power of nature: Investigating the effects of storage on plant-based pigments and bioactivities in tropical Ficus spp. extracts 释放自然的力量:研究储存对热带榕属植物提取物中植物色素和生物活性的影响
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-01-06 DOI: 10.1016/j.jarmap.2024.100528
Kumanan N. Govaichelvan , Nazimah Hamid , Kevin Kantono , Khanom Simarani , Jamilah Syafawati Yaacob

The phytochemical composition and antioxidant activities of tropical Ficus trees: Ficus benjamina (FB), Ficus racemosa (FRa) and Ficus religiosa (FRe) were analysed in this study. The bark and leaf samples of these species were subjected to solvent extraction using absolute methanol and analysed for their total chlorophyll (TCC), total carotenoid (TXc) and total anthocyanin (TAC) contents. The TPC, TFC and antioxidant potential of the extracts were also determined. The stability of the extracts during storage at different temperatures (4 °C, − 20 °C and − 80 °C) was investigated at weeks 0, 4 and 8. The results showed that the bark of F. racemosa and leaves of F. benjamina contained the highest amounts of phenolic content, with significantly higher antioxidant properties. PLSR analysis revealed that the secondary metabolite composition strongly influenced the antioxidant activities differently with Ficus trees. VIP scores were also computed to determine the most important factors that contributed to the ABTS and FRAP activities in the extracts from each species. Specifically, TPC, TFC, TXc, TCC, chlorophyll a, and chlorophyll b contents were the most important variables for F. benjamina. Meanwhile, TPC, TAC, TFC and chlorophyll b were the most important factors for F. racemosa, and only TAC, TPC and chlorophyll b were the most important factors for F. religiosa. Long term storage (8 weeks) of the extracts at 4 °C was observed to cause the highest percentage of metabolite degradation (up to 88.56% in TXc, 66.86% in TPC and 81.93% in TFC). Storage at − 80 °C was found to be the most suitable for retaining the secondary metabolites content and bioactivities of the samples. Taken together, F. religiosa leaf was identified as the best source of pigments and antioxidants. The findings of this study highlight the huge potential of plant extracts as both natural pigments and antioxidants in the food industry. These extracts can serve as a source of colorants while also improving the nutritional quality of food products, which aligns with the growing demand for clean-label and sustainable food options that can replace synthetic food additives.

本研究分析了热带榕树的植物化学成分和抗氧化活性:本研究分析了 Ficus benjamina (FB)、Ficus racemosa (FRa) 和 Ficus religiosa (FRe)。这些树种的树皮和叶片样本经绝对甲醇溶剂萃取后,分析其总叶绿素(TCC)、总类胡萝卜素(TXc)和总花青素(TAC)含量。此外,还测定了提取物的总叶绿素(TPC)、总胡萝卜素(TFC)和抗氧化潜力。研究了提取物在不同温度(4 °C、- 20 °C和- 80 °C)下储存第0、4和8周时的稳定性。结果表明,F. racemosa 的树皮和 F. benjamina 的叶片含有最高量的酚类物质,其抗氧化性明显更高。PLSR 分析表明,次生代谢物的组成对不同榕树的抗氧化活性有很大影响。此外,还计算了 VIP 分数,以确定影响各树种提取物 ABTS 和 FRAP 活性的最重要因素。具体来说,TPC、TFC、TXc、TCC、叶绿素 a 和叶绿素 b 的含量是榕树最重要的变量。同时,TPC、TAC、TFC 和叶绿素 b 是 F. racemosa 的最重要因素,而只有 TAC、TPC 和叶绿素 b 是 F. religiosa 的最重要因素。在 4 °C下长期储存(8 周)可观察到提取物的代谢物降解率最高(TXc 降解率高达 88.56%,TPC 降解率高达 66.86%,TFC 降解率高达 81.93%)。在 - 80 °C 下储存最适合保留样品的次生代谢物含量和生物活性。综上所述,宗教草叶被认为是色素和抗氧化剂的最佳来源。这项研究的结果凸显了植物提取物作为天然色素和抗氧化剂在食品工业中的巨大潜力。这些提取物可以作为着色剂的来源,同时还能提高食品的营养质量,这与人们对清洁标签和可替代合成食品添加剂的可持续食品日益增长的需求是一致的。
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引用次数: 0
Unleashing the potential of medicinal and aromatic plant wastes with particular consideration of vermicomposting: A comprehensive review of literature 释放药用和芳香植物废物的潜力,特别是考虑蚯蚓堆肥:文献综述
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2023-12-13 DOI: 10.1016/j.jarmap.2023.100527
Acharya Balkrishna , Stuti Srivastava , Deepika Srivastava , Nidhi Sharma , Vedpriya Arya , Ajay K. Gautam

The medicinal and aromatic plants (MAPs) industries generate a substantial amount of waste and residues during the production of many important and useful products. If not effectively managed, these wastes can lead to environmental pollution and economic challenges. In recent years, there has been a growing emphasis on the use of these waste materials to create value-added products. One such method is vermicomposting which converts MAP wastes into vermicompost and offers numerous benefits for agricultural applications. Vermicompost serves as an organic fertilizer that improves soil health and fertility while reducing the need for chemical fertilizers. This comprehensive review explores the management of residual waste released from the MAPs industries, focusing on their conversion into vermicompost and their subsequent application in the agriculture sector. The waste generated during the extraction of essential oils from MAPs is also discussed along with the importance of implementing eco-friendly waste management solutions. Overall, this review sheds light on the production of MAP wastes, problems generated and the possible solutions for their environmental friendly management.

药用和芳香植物(MAPs)产业在生产许多重要和有用产品的过程中会产生大量废物和残留物。如果不加以有效管理,这些废物可能会导致环境污染和经济挑战。近年来,人们越来越重视利用这些废料创造增值产品。蚯蚓堆肥就是其中一种方法,它能将 MAP 废弃物转化为蚯蚓堆肥,并为农业应用带来诸多益处。蚯蚓堆肥是一种有机肥料,可改善土壤健康和肥力,同时减少对化肥的需求。本综述探讨了 MAPs 工业所产生的残余废物的管理问题,重点是将其转化为蛭肥以及随后在农业部门的应用。此外,还讨论了从 MAPs 中提取精油过程中产生的废物,以及实施生态友好型废物管理解决方案的重要性。总之,本综述揭示了 MAP 废弃物的生产、产生的问题及其环境友好型管理的可能解决方案。
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引用次数: 0
Investigation of the growth and phytochemical variations for different Salvia species in terms of their transfer and adaptation in Iran 伊朗不同鼠尾草品种在迁移和适应方面的生长和植物化学变化研究
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2023-12-02 DOI: 10.1016/j.jarmap.2023.100526
Reza Shahhoseini , Seyed Mohsen Hossaini , Mohammad Javad Nikjouyan

More than 1000 species of Salvia genus are reported all over the world, some of which have high pharmaceutical values for use in food-pharmaceutical and cosmetic industries. In order to domesticate and breed some endemic Salvia species of Iran, the seeds of 14 species were collected from North, West, Central, and Northeast of Iran, in an altitude ranging from 580 m to 2269 m. To evaluate the diversity of the studied Salvia species without environmental influences, the seeds of the collected species were planted under similar environmental and soil conditions. At flowering stage, the morphological and essential oil content of the grown plants were determined. The assayed species were phenotypically diverse, and there were considerable variations among the species in terms of plant growth and flower characteristics. Furthermore, significant differences were observed among the studied species regarding the quantity of essential oil. The mean essential oil content and yield of different Salvia species were 0.06–1.24% v/w and 0.02–0.19 g per plant, respectively. Among the species, Salvia officinalis and Salvia sclarea showed the highest essential oil content and yield, respectively. Correlation analysis showed a weak relationship between the morphological characteristics and essential oil content. Moreover, the results of Principal Compound Analysis (PCA) based on the assayed traits were partially accordance with the species categorizing by Hierarchical Custer Analysis (HCA). Generally according to the obtained results, Salvia sclarea, Salvia reuterana, Salvia officinalis, and Salvia spinosa can be suggested for further domestication and breeding programs.

据报道,全世界有1000多种鼠尾草属植物,其中一些具有很高的药用价值,可用于食品、制药和化妆品行业。为了驯化和繁殖伊朗特有的鼠尾草,在海拔580 ~ 2269 m的伊朗北部、西部、中部和东北部采集了14种鼠尾草种子。为了评估在不受环境影响的情况下所研究的鼠尾草物种的多样性,将收集到的物种种子种在相似的环境和土壤条件下。在开花阶段,测定了植株的形态和挥发油含量。被测树种表型多样,在植株生长和花的性状上存在较大差异。此外,在研究物种之间观察到精油含量的显著差异。不同品种的平均挥发油含量和产量分别为0.06 ~ 1.24% v/w和0.02 ~ 0.19 g /株。其中,丹参和鼠尾草精油含量和产量最高。相关分析表明,形态特征与挥发油含量之间的相关性较弱。此外,基于这些性状的主成分分析(PCA)结果与层次聚类分析(HCA)的分类结果有一定的一致性。根据所获得的结果,一般可以建议鼠尾草、鼠尾草、鼠尾草和鼠尾草进一步驯化和繁殖。
{"title":"Investigation of the growth and phytochemical variations for different Salvia species in terms of their transfer and adaptation in Iran","authors":"Reza Shahhoseini ,&nbsp;Seyed Mohsen Hossaini ,&nbsp;Mohammad Javad Nikjouyan","doi":"10.1016/j.jarmap.2023.100526","DOIUrl":"10.1016/j.jarmap.2023.100526","url":null,"abstract":"<div><p>More than 1000 species of <span><em>Salvia</em></span> genus are reported all over the world<em>,</em> some of which have high pharmaceutical values for use in food-pharmaceutical and cosmetic industries. In order to domesticate and breed some endemic <em>Salvia</em> species of Iran, the seeds of 14 species were collected from North, West, Central, and Northeast of Iran, in an altitude ranging from 580 m to 2269 m. To evaluate the diversity of the studied <em>Salvia</em><span> species without environmental influences, the seeds of the collected species were planted under similar environmental and soil conditions. At flowering stage, the morphological and essential oil content of the grown plants were determined. The assayed species were phenotypically diverse, and there were considerable variations among the species in terms of plant growth and flower characteristics. Furthermore, significant differences were observed among the studied species regarding the quantity of essential oil. The mean essential oil content and yield of different </span><em>Salvia</em> species were 0.06–1.24% v/w and 0.02–0.19 g per plant, respectively. Among the species, <span><em>Salvia officinalis</em></span> and <em>Salvia sclarea</em><span> showed the highest essential oil content and yield, respectively. Correlation analysis showed a weak relationship between the morphological characteristics and essential oil content. Moreover, the results of Principal Compound Analysis (PCA) based on the assayed traits were partially accordance with the species categorizing by Hierarchical Custer Analysis (HCA). Generally according to the obtained results, </span><em>Salvia sclarea</em>, <em>Salvia reuterana</em>, <em>Salvia officinalis</em>, and <em>Salvia spinosa</em> can be suggested for further domestication and breeding programs.</p></div>","PeriodicalId":15136,"journal":{"name":"Journal of Applied Research on Medicinal and Aromatic Plants","volume":null,"pages":null},"PeriodicalIF":3.9,"publicationDate":"2023-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138538305","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Solvent selection and effect of extraction conditions on ultrasound-assisted extraction of phenolic compounds from galangal (Alpinia officinarum) 超声辅助提取高良姜中酚类化合物的溶剂选择及提取条件的影响
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2023-11-19 DOI: 10.1016/j.jarmap.2023.100525
Murat Ozdemir , Veranur Gungor , Mehmet Melikoglu , Coskun Aydiner

This study aimed to identify the appropriate extraction solvent and investigate the effect of temperature (20–70 °C), time (5–60 min), solvent/solid ratio (5−40), ethanol/water concentration (10–90%) and ultrasound-assisted extraction conditions (ultrasound power of 10–90% and ultrasound cycle of 1–9) on total phenolic content (TPC), 2,2-diphenyl-1-picrylhydrazyl (DPPH), 2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) and total flavonoid content (TFC) of galangal extracts. All extraction conditions studied had significant effect (p ≤ 0.05) on TPC, DPPH, ABTS and TFC. Ethanol/water (50%) binary solution was found as the most appropriate extraction solvent. Temperature of 25 °C, extraction time of 20 min, ethanol/water concentration of 50%, solvent/solid ratio of 10, ultrasound power of 50% and ultrasound cycle of 5 were determined to be the most efficient extraction conditions which yielded TPC of 66.89 mg GAE/g, DPPH of 49.01% inhibition, ABTS of 147.43 mM TE/ml and TFC of 148.22 QE/g. Significantly positive or negative, very high, strong and moderate Pearson correlation coefficients were obtained among TPC, DPPH, ABTS and TFC values. Pearson correlation analysis revealed that very high correlations (r ≥ 0.90) existed between DPPH and ABTS (r = 0.907, p ≤ 0.01), and TPC and TFC (r = 0.939, p ≤ 0.01) for the ethanol/water concentration, and between DPPH and ABTS (r = 0.944, p ≤ 0.01) for the ultrasound power. The current study showed that phenolic compounds with high antioxidant activity could be extracted from galangal using the ultrasound-assisted extraction conditions determined.

本研究旨在确定合适的提取溶剂,考察温度(20 ~ 70℃)、时间(5 ~ 60 min)、液固比(5 ~ 40)、乙醇/水浓度(10 ~ 90%)和超声辅助提取条件(超声功率10 ~ 90%、超声周期1 ~ 9)对高良良提取物总酚含量(TPC)、2,2′-氮基-双(3-乙基苯并噻唑-6-磺酸)(ABTS)和总黄酮含量(TFC)的影响。各提取条件对TPC、DPPH、ABTS、TFC均有显著影响(p≤0.05)。发现乙醇/水(50%)二元溶液是最合适的提取溶剂。最佳提取条件为:温度25℃,提取时间20 min,乙醇/水浓度50%,料液比10,超声功率50%,超声循环5次,TPC为66.89 mg GAE/g, DPPH抑制率为49.01%,ABTS为147.43 mM TE/ml, TFC为148.22 QE/g。TPC、DPPH、ABTS和TFC之间存在显著正相关或负相关、非常高、很强和中等程度的Pearson相关系数。Pearson相关分析显示,DPPH与ABTS (r = 0.907, p≤0.01)、TPC与TFC (r = 0.939, p≤0.01)、超声功率与DPPH (r = 0.944, p≤0.01)之间存在非常高的相关性(r≥0.90)。本研究表明,通过确定超声辅助提取条件,可从高良姜中提取具有较高抗氧化活性的酚类化合物。
{"title":"Solvent selection and effect of extraction conditions on ultrasound-assisted extraction of phenolic compounds from galangal (Alpinia officinarum)","authors":"Murat Ozdemir ,&nbsp;Veranur Gungor ,&nbsp;Mehmet Melikoglu ,&nbsp;Coskun Aydiner","doi":"10.1016/j.jarmap.2023.100525","DOIUrl":"https://doi.org/10.1016/j.jarmap.2023.100525","url":null,"abstract":"<div><p><span>This study aimed to identify the appropriate extraction solvent and investigate the effect of temperature (20–70 °C), time (5–60 min), solvent/solid ratio (5−40), ethanol/water concentration (10–90%) and ultrasound-assisted extraction conditions (ultrasound power of 10–90% and ultrasound cycle of 1–9) on total phenolic content (TPC), 2,2-diphenyl-1-picrylhydrazyl (DPPH), 2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) and total flavonoid<span> content (TFC) of galangal extracts. All extraction conditions studied had significant effect (p ≤ 0.05) on TPC, DPPH, ABTS and TFC. Ethanol/water (50%) binary solution was found as the most appropriate extraction solvent. Temperature of 25 °C, extraction time of 20 min, ethanol/water concentration of 50%, solvent/solid ratio of 10, ultrasound power of 50% and ultrasound cycle of 5 were determined to be the most efficient extraction conditions which yielded TPC of 66.89 mg GAE/g, DPPH of 49.01% inhibition, ABTS of 147.43 mM TE/ml and TFC of 148.22 QE/g. Significantly positive or negative, very high, strong and moderate Pearson correlation coefficients were obtained among TPC, DPPH, ABTS and TFC values. Pearson correlation analysis revealed that very high correlations (r ≥ 0.90) existed between DPPH and ABTS (r = 0.907, p ≤ 0.01), and TPC and TFC (r = 0.939, p ≤ 0.01) for the ethanol/water concentration, and between DPPH and ABTS (r = 0.944, p ≤ 0.01) for the ultrasound power. The current study showed that phenolic compounds with high </span></span>antioxidant activity could be extracted from galangal using the ultrasound-assisted extraction conditions determined.</p></div>","PeriodicalId":15136,"journal":{"name":"Journal of Applied Research on Medicinal and Aromatic Plants","volume":null,"pages":null},"PeriodicalIF":3.9,"publicationDate":"2023-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138467493","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diversity analysis of southern African Artemisia afra using a single nucleotide polymorphism derived from diversity arrays 利用多样性阵列的单核苷酸多态性分析非洲南部青蒿的多样性
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2023-11-10 DOI: 10.1016/j.jarmap.2023.100523
Moosa Mahmood Sedibe , Matumelo A. Rafiri , Goitsemang Mahlomola Hendry Dikane , Matthew Chilaka Achilonu , S’busiso Mfan’vele Nkosi , Xolile Veronica Ngubane , Rian Pierneef

Artemisia afra is an aromatic shrub used as a herbal remedy in southern Africa for various disorders, including coughs, colds, influenza, and, most notably, for the prophylaxis and treatment of Plasmodium falciparum infections. Modern high-throughput genotyping by sequencing, which combines next generation sequencing and diversity array technology (DArTseq) complexity reduction methods, allows for the generation of high-quality whole-genome profiles without any previous organismal genetic information that may hamper the diversity analyses. This study investigated the feasibility of incorporating DArTseq-derived single-nucleotide polymorphisms (SNPs) and bioactive compounds into a geographic information system to predict the spatial distribution of A. afra gene diversity in selected southern African environs. DNA extraction, sequencing, and SNP calling mineral analyses (using R Studio) were performed on a total of 80 genotypes collected around Roma and Mohale’s Hoek, Lesotho, and Wepener and Hobhouse, South Africa. The unweighted pair group method with arithmetic mean (UPGMA) and neighbour-joining dendrograms revealed three clusters of variation among genotypes; however, geographic distribution did not influence A. afra genetic diversity. The mean heterozygosity among genotypes was 7.7%. Genotypes collected in Roma and Mohale’s Hoek exhibited high levels of genetic diversity. Local A. afra genetic diversity was relatively low, indicating uniformity of subspecies per locality. The diversity among genotypes indicated that A. afra SNPs may occur despite the location. Given that genetic diversity enhances crop performance, our findings can be useful in germplasm management, industries producing by-products of A. afra, and plant breeding programs. For the long-term conservation of medicinal plants in South Africa, significant sampling and regional data are required. In addition to evaluating qualitative and quantitative assessments of phytochemicals, it is necessary to evaluate foliar mineral composition, as well as the agronomic and morphological characteristics of collected specimens from studied locations.

非洲蒿是一种芳香灌木,在非洲南部用作草药治疗各种疾病,包括咳嗽、感冒、流感,最重要的是用于预防和治疗恶性疟原虫感染。现代高通量测序基因分型结合了下一代测序和多样性阵列技术(DArTseq)复杂性降低方法,可以在没有任何先前可能妨碍多样性分析的生物遗传信息的情况下生成高质量的全基因组图谱。本研究探讨了将dartseq衍生的单核苷酸多态性(snp)和生物活性化合物纳入地理信息系统,以预测非洲南部地区afra基因多样性空间分布的可行性。对在莱索托的Roma和Mohale’s Hoek以及南非的Wepener和Hobhouse收集的总共80个基因型进行DNA提取、测序和SNP调用矿物分析(使用R Studio)。带算术平均值的非加权对群法(UPGMA)和邻联树形图揭示了基因型间的3个变异簇;然而,地理分布对非洲古猿的遗传多样性没有影响。基因型间平均杂合度为7.7%。在Roma和Mohale’s Hoek收集的基因型显示出高水平的遗传多样性。非洲南方古猿的遗传多样性相对较低,表明每个地方的亚种具有一致性。基因型间的多样性表明,afra单核苷酸多态性可能与地理位置无关。鉴于遗传多样性可以提高作物的生产性能,我们的研究结果可以用于种质资源管理、生产非洲侧翼草副产品的工业和植物育种计划。为了南非药用植物的长期保护,需要大量的采样和区域数据。除了评估植物化学物质的定性和定量评估外,还需要评估从研究地点收集的标本的叶面矿物组成以及农艺和形态特征。
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引用次数: 0
Effect of temperature, pretreatments, gibberellin (GA3), salt and drought stress on germination of Thymus satureioides coss of Morocco 温度、预处理、赤霉素(GA3)、盐和干旱胁迫对摩洛哥胸腺萌发的影响
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2023-11-10 DOI: 10.1016/j.jarmap.2023.100524
Hanane Oublid , Mohamed Ait Hamza , Hassan Boubaker , Abdellah El Hamdaoui , Mohamed El Yaagoubi , Imane Abbad , Mina El Moutaouakil , Fouad Msanda

Thymus satureioides Cosson is an endemic medicinal and aromatic plant species of both Morocco and Algeria, holds significant cultural and economic importance. It is used in traditional medicine to treat various diseases and also as a culinary spice herb. T. satureioides has become a key export for Morocco. However, increasing market demand and the effects of climate change have led to a decline in its wild populations, raising concerns about the scarcity of this valuable natural resource. To address these challenges, a comprehensive understanding of the environmental requirements for the germination of T. satureioides is essential for planning and prioritizing conservation efforts in its native habitats. In this context, the aim of this study was to assess the combined effects of various pretreatments and temperature and of salinity, drought stress, and gibberellin on the germination parameters of T. satureioides. Seeds were collected from a wild plant population in the Anti-Atlas Mountains. The tests included five pretreatments (mechanical scarification, sulfuric acid (95%), dry heat, boiling water and hydrogen peroxide) in conjunction with five temperature conditions (10, 15, 20, 25 and 30 °C). Additionally, six concentrations of sodium chloride (0, 25, 50, 100, 150 and a 200 mM), six water potential levels of polyethylene glycol (PEG-6000) (0, −0.07, −0.14, −0.22, −0.32 and - 0.53 MPa) and six concentrations of gibberellin (0, 50, 100, 500, 1000 and 2000 ppm) were tested. Results showed that seeds can germinate without any treatment. However, seeds treated with dry heat followed by incubation at 20 °C improved all the germination parameters. In addition, germination parameters progressively decreased and delayed with increasing levels of both salt and water stress. Without stress, the germination percentage was 100%, with increasing salt stress to 200 mM germination was completely inhibited. Although, seeds showed a low germination percentage (5,67%) at the highest osmotic potential (−0.53 MPa).

科松胸腺是摩洛哥和阿尔及利亚的一种特有的药用和芳香植物,具有重要的文化和经济意义。它在传统医学中用于治疗各种疾病,也作为烹饪香料草药。甘油三酯已成为摩洛哥的主要出口产品。然而,不断增长的市场需求和气候变化的影响导致其野生种群数量下降,引起了人们对这种宝贵自然资源稀缺的担忧。为了应对这些挑战,全面了解赤叶菊发芽的环境要求对于规划和优先考虑其原生栖息地的保护工作至关重要。在此背景下,本研究的目的是评估不同预处理和温度以及盐度、干旱胁迫和赤霉素对赤霉素萌发参数的综合影响。种子采集自反阿特拉斯山脉的一个野生植物种群。试验包括五种预处理(机械划伤、硫酸(95%)、干热、沸水和过氧化氢)以及五种温度条件(10、15、20、25和30 °C)。此外,还测试了六种浓度的氯化钠(0、25、50、100、150和200 mM)、六种水势水平的聚乙二醇(PEG-6000)(0、- 0.07、- 0.14、- 0.22、- 0.32和- 0.53 MPa)和六种浓度的赤霉素(0、50、100、500、1000和2000 ppm)。结果表明,种子无需任何处理即可发芽。然而,干热处理后再在20 °C孵育,种子的萌发参数均有所提高。此外,随着盐胁迫和水分胁迫水平的增加,萌发参数逐渐降低和延迟。在没有胁迫的情况下,萌发率为100%,当盐胁迫增加到200 mM时,萌发完全被抑制。在最高渗透电位(- 0.53 MPa)下,种子发芽率较低(5.67%)。
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引用次数: 0
Characterization of dragonhead (Dracocephalum moldavica L.) landraces: Genetic, chemotypic, and agro-morphologic perspectives 龙头(Dracocephalum moldavica L.)地方品种的特征:遗传、化学型和农业形态学的观点
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2023-11-04 DOI: 10.1016/j.jarmap.2023.100522
Seyedeh Fatemeh Borghei , Ali Azizi , Seyyed Hossein Pourhosseini , Marziye Rahimi-Rizi

Dragonhead (Dracocephalum moldavica L.), an endangered herb, faces significant threats due to the loss of biodiversity driven by land-use change. The seeds of seven landraces of D. moldavica were collected from various native populations in different regions of Northwest Iran. Subsequently, they were cultivated in 10 replications, spanning a total of 70 plots. This cultivation took place at the Ekbatan station of the Agriculture and Natural Resources Research Center in Hamadan province. This study aimed to assess the morphological traits, essential oil (EO) content, and genetic diversity within seven populations of Dracocephalum moldavica. Significant variations in morphological traits were observed among populations, indicating phenotypic diversity and potential for selective breeding programs. The EO content ranged from 0.03 % to 0.13 % (w/w), with the highest in the HO population and the lowest in the KE population. EO yield varied from 1.97 in the KE populations to 13.97 Kg/ha in the HO populations. The chemical composition of the EOs varied among populations and consisted of 18–24 components, with geranyl acetate being the dominant component. PCA analysis identified population differences primarily related to geranyl acetate, nerol, geraniol, neryl acetate, and neral. The observed variation in EO composition may result from genetic and environmental factors. ISSR analysis revealed high genetic diversity, with 84 out of 94 scorable bands being polymorphic. Cluster and PCoA analysis revealed distinct genetic clusters among populations, although some diversities did not align with geographical origin, suggesting seed transfer or high heterozygosity. The study highlights the effectiveness of ISSR markers in assessing genetic diversity and provides insights into the genetic structure and variability of D. moldavica populations. Furthermore, the correlation between ISSR markers and phytochemical traits suggests their potential for breeding programs to enhance important traits in D. moldavica. Considering both phytochemical and morphological properties is crucial in breeding programs due to pleiotropic effects of genetic loci.

龙头(Dracocephalum moldavica L.)是一种濒危草本植物,由于土地利用变化导致生物多样性丧失,龙头面临着重大威胁。从伊朗西北部不同地区的不同土著种群中采集了7个地方品种的moldavica种子。随后,他们进行了10个重复的栽培,共跨越70个地块。这种种植是在哈马丹省农业和自然资源研究中心的Ekbatan站进行的。摘要本研究旨在分析7个居群的形态特征、挥发油含量和遗传多样性。种群间形态性状存在显著差异,表明表型多样性和选择性育种计划的潜力。EO含量为0.03% ~ 0.13% (w/w), HO群体最高,KE群体最低。EO产量变化范围从KE群体的1.97 Kg/ hm2到HO群体的13.97 Kg/ hm2。不同种群间精油的化学成分各不相同,共有18 ~ 24种成分,乙酸香叶精油为主要成分。主成分分析确定了种群差异主要与乙酸香叶基、橙花醇、香叶醇、乙酸橙叶基和神经碱有关。观察到的EO组成的变化可能是遗传和环境因素造成的。ISSR分析显示了较高的遗传多样性,94个可评分条带中有84个是多态性的。聚类分析和PCoA分析显示,种群间存在明显的遗传聚类,但有些多样性与地理起源不一致,表明存在种子转移或高杂合性。该研究突出了ISSR标记在评估遗传多样性方面的有效性,并为moldavica群体的遗传结构和变异提供了新的见解。此外,ISSR标记与植物化学性状之间的相关性表明,ISSR标记有潜力用于提高moldavica重要性状的育种计划。由于遗传位点的多效性,在育种计划中考虑植物化学和形态特性是至关重要的。
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引用次数: 0
Drying Schinus terebinthifolius leaves in a rotating drum dryer – Evaluation of the product quality and energy consumption by RSM models 在转鼓干燥机中干燥三叶草叶片。用RSM模型评价产品质量和能耗
IF 3.9 2区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2023-10-30 DOI: 10.1016/j.jarmap.2023.100521
Raissa Henrique Silva, Maria do Carmo Ferreira

The performance of a specially designed rotating drum for processing medicinal leaves was evaluated for air drying Schinus terebinthifolius leaves. The study is aimed at investigating the influence of air temperature, air velocity, leaf mass load, and drum rotation speed on leaf drying. Response Surface Methodology (RSM) was employed to optimize the drying conditions. Second-order polynomial equations were used to assess the effects of drying conditions on drying time, color degradation, and energy consumption. Based on the analysis, the optimum drying conditions were determined to be an air temperature of 52.5 °C, air velocity of 0.3 m/s, and a mass load of 200 g. The predicted values of drying time, specific power input and the chromatic parameter a*/b* at this optimal condition were 499 min, 14.4 kWh/kg and − 0.063, respectively. Furthermore, a comparison between ethanolic extracts obtained from fresh leaves and those from dried leaves revealed a significant decrease in total phenolic compounds (TPC) and antioxidant activity (AA) in the extracts from the dried leaves. Among the tested conditions, the best result for both TPC and AA was observed in the extracts of leaves air dried under 50 °C and 0.60 m/s, in which the TPC and AA dropped respectively from 75 mg GAE/mg dry matter and 90 % to approximately 22 mg GAE/mg dry matter and 88 %. The air temperature was identified as the most influential factor affecting the quality attributes of dried leaves and their extracts. The rotating drum proved to be an effective alternative for drying herbs and medicinal leaves.

对一种特殊设计的药用叶加工转鼓进行了风干三叶草叶片的性能评价。研究了温度、风速、叶片质量负荷和转鼓转速对叶片干燥的影响。采用响应面法(RSM)对干燥条件进行优化。采用二阶多项式方程评价干燥条件对干燥时间、颜色降解和能耗的影响。通过分析,确定了最佳干燥条件为空气温度52.5℃,风速0.3 m/s,质量负荷200 g。在此最佳条件下,干燥时间预测值为499 min,比功率输入预测值为14.4 kWh/kg,色度参数预测值为- 0.063。此外,鲜叶乙醇提取物和干叶乙醇提取物的总酚类化合物(TPC)和抗氧化活性(AA)显著降低。其中,在50℃、0.60 m/s条件下风干的叶提取物中,TPC和AA的提取效果最好,TPC和AA分别从75 mg GAE/mg干物质和90%下降到约22 mg GAE/mg干物质和88%。空气温度是影响干叶及其提取物品质属性的最主要因素。旋转鼓被证明是一种有效的替代干燥草药和药用叶。
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引用次数: 0
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Journal of Applied Research on Medicinal and Aromatic Plants
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