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WAAS-based stability analysis and identification of elite palmarosa (Cymbopogon martinii [Roxb.] Wats. var. motia Burk.) lines using multi-trait genotype-ideotype distance index for higher biomass and essential oil in the North-Western Himalayas 基于waas的优良棕榈草稳定性分析与鉴定[j]。寺庙。利用多性状基因型-理想型距离指数对喜玛拉雅西北地区高生物量和高挥发油品种进行研究
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2025-01-09 DOI: 10.1016/j.jarmap.2025.100621
Amit Rana , Ajeta Katoch , Rajni Devi , Ravi Kumar , Neha Kumari , Neha Kapoor , Abhishek Kumar , Vijay Lata Pathania , Sanatsujat Singh , Satbeer Singh , Ramesh Chauhan , Dinesh Kumar , Ashok Kumar
Palmarosa is an important aromatic perennial grass mainly cultivated for its high-value geraniol-rich essential oil. The growing global demand for palmarosa essential oil and the limited availability of suitable cultivars in the North-Western Himalayan region highlight the need of superior planting material crucial for its production. Hence, the present endeavour was led using 25 palmarosa genotypes evaluated for 12 traits to estimate the effects of genotype, environment and their interaction across four seasons (2019–23) using AMMI (additive main effects and multiplicative interaction) and BLUP (best linear unbiased prediction) based on WAAS (weighted average of absolute scores). Results from the study showed significant genotype × environment interaction effects for most of the traits evaluated. Essential oil characterization identified 6 major compounds with geraniol being the dominant constituent. Association studies showed its significant positive association with ocimene and myrcene while negative association with geranial, neral, L-linalool and (E)-caryophyllene. Higher variability estimates for tillers per plant, number of leaves per stem, flower head length, flower head branches, biological yield per plant and essential oil content demonstrated their potential utilization as selection criteria for higher genetic gains. Based on mean performance, AMMI, WAAS, and genotype and genotype by environment analysis, genotypes G1, G2 and G4 were identified as the most stable with high trait performance and geraniol content. Also, based on multi-trait genotype-ideotype distance index, genotypes were ranked as G2, G1, G4, G14 and G8. Hence, these genotypes can be prioritized to enhance geraniol-rich essential oil production and meet the growing demand for quality planting material.
Palmarosa是一种重要的多年生芳香草,主要因其富含香叶醇的高价值精油而被栽培。全球对棕榈籽精油的需求不断增长,而喜马拉雅西北部地区适宜品种的供应有限,这突出了对其生产至关重要的优质种植材料的需求。因此,本研究利用25个棕榈草基因型对12个性状进行了评估,利用AMMI(加性主效应和乘法相互作用)和基于WAAS(绝对分数加权平均)的BLUP(最佳线性无偏预测)来估计基因型、环境及其相互作用在四个季节(2019-23)的影响。结果表明,基因型× 对大部分性状有显著的环境互作效应。精油鉴定鉴定出以香叶醇为主要成分的6种主要化合物。关联研究表明,其与香芹烯、月桂烯呈显著正相关,与香樟、丁香、l -芳樟醇和(E)-石竹烯呈显著负相关。单株分蘖数、每茎叶数、花头长度、花头分枝、单株生物产量和精油含量的变异性较高,表明它们有潜力作为较高遗传收益的选择标准。综合平均生产性能、AMMI、WAAS以及环境分析的基因型和基因型,G1、G2和G4基因型最稳定,性状性能和香叶醇含量较高。基于多性状基因型-理想型距离指数,将基因型排序为G2、G1、G4、G14和G8。因此,这些基因型可以优先提高富含香叶醇的精油产量,满足对优质种植材料日益增长的需求。
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引用次数: 0
Assessment of genetic variation and evolutionary dynamics in saffron through matK and rbcL barcodes 利用matK和rbcL条形码分析藏红花的遗传变异和进化动态
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-12-27 DOI: 10.1016/j.jarmap.2024.100620
Imane Boudadi, Mohamed Lachheb, Soumaya El Merzougui, Khadija Lachguer, Mohammed Amine Serghini
The saffron plant (Crocus sativus L.), renowned for its culinary and medicinal properties, faces genetic challenges due to its vegetative propagation and restricted cultivation regions. This study investigates saffron's genetic variation at the nucleotide level using DNA barcoding with two loci (rbcL and matK) across sixteen accessions from diverse geographic regions. Amplicon analysis revealed that the rbcL locus (720 bp) is longer than matK (613 bp) and exhibits greater variability. Sequence analysis identified 27 polymorphic sites in rbcL and 15 in matK, with rbcL showing higher insertion-deletion diversity (9.883 vs. 5.358) and more mutations (29 vs. 17). These differences resulted in 13 haplotypes for rbcL and 11 for matK, yielding a high haplotype diversity (HD = 0.95). Notably, the TH3 accession displayed distinct genetic traits, as evidenced by phylogenetic trees and PCA clustering. A positive correlation between genetic distance and altitude (Kendall’s r = 0.244, p = 0.00032) was observed for matK. Two-dimensional DNA barcoding provided effective visualisation of genetic markers. This study highlights the utility of rbcL and matK barcodes for exploring saffron’s genetic diversity and evolutionary dynamics, providing critical insights into germplasm management and conservation efforts.
藏红花植物(Crocus sativus L.)以其烹饪和药用特性而闻名,由于其无性繁殖和栽培区域的限制,面临着遗传挑战。本研究利用DNA条形码技术对来自不同地理区域的16个藏红花品种的两个基因座(rbcL和matK)进行了核苷酸水平的遗传变异研究。扩增子分析显示,rbcL位点(720 bp)比matK(613 bp)长,并表现出更大的变异。序列分析在rbcL中鉴定出27个多态性位点,在matK中鉴定出15个多态性位点,rbcL具有更高的插入-删除多样性(9.883比5.358)和更多的突变(29比17)。这些差异导致rbcL有13个单倍型,matK有11个单倍型,产生较高的单倍型多样性(HD = 0.95)。值得注意的是,系统发育树和PCA聚类结果表明,TH3基因具有明显的遗传特征。遗传距离与海拔高度呈正相关(Kendall’s r = 0.244,p = 0.00032)。二维DNA条形码提供了有效的遗传标记可视化。本研究强调了rbcL和matK条形码在探索藏红花遗传多样性和进化动力学方面的应用,为种质资源管理和保护工作提供了重要的见解。
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引用次数: 0
Effect of salinity and temperature on germination and post germination of Anabasis articulata (Forssk.) Moq. (Amaranthaceae): An important salt tolerant plant in Algeria 盐度和温度对竹叶重根发芽和萌发后的影响Moq。(苋科):阿尔及利亚重要的耐盐植物
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-12-27 DOI: 10.1016/j.jarmap.2024.100619
Madjda Aouache , Hafida Trabelsi , Mohammed Elhafed Kherraze , Anouar Chafou , Achouak Guerbazi , Bougoutaia Youcef , Marius-Nicusor Grigore , Ali El-Keblawy
Anabasis articulata, a medicinal plant used in Algeria to treat various ailments, also has significant pastoral and ecological value. Assessing its tolerance to temperature changes and soil salinity is crucial for understanding its potential use in the restoration of salt-affected lands in dry and semi-arid regions. The objectives of the present work were to determine the optimal temperature for seed germination of an important medicinal species and evaluate the degree of tolerance to saline and thermal stresses during germination and early seedling stages of Anabasis articulata. Seeds were collected from individuals of two populations of Anabasis articulata located in Sed Rahal (Djelfa-Algeria) and Oued N’sa (Ouargla-Algeria). Seeds were germinated at seven salinity levels (0, 100, 200, 300, 400, 500, and 600 mM) and incubated at eight temperatures (5,10, 15, 20, 25, 30, 35, 40, and 45°C). The germination attributes studied were germination kinetics, germination percentage, germination rate, and the measurement of shoot and root lengths of seedlings. The statistical analysis revealed that salinity level and temperature variations significantly affected germination and post-germination characteristics. The highest germination percentages were obtained under non-saline conditions; salt stress delayed or limited the germination process and seedling growth. High temperatures (35–45°C) have a more negative effect than lower temperatures (5–15°C). Optimum temperatures range from 20 to 30°C. At these temperatures, even at a saline concentration of 600 mM, 46 % of the seeds were able to germinate for the Sed Rahal station and 21 % for the Oued N’sa station. Sed Rahal exhibited higher final germination percentages, germination rates, and seedling growth compared to Oued N’sa, particularly under moderate temperatures and lower salinity levels, demonstrating better resilience to salinity and temperature extremes. Sed Rahal seedlings exhibited more reduction in root length at low temperatures, while Oued N’sa seedlings showed more reduction in shoot length at high temperatures. The results demonstrate that this species possesses significant ecological adaptation in germination and seedling stages, making it suitable for the restoration of damaged ecosystems and marginal areas.
在阿尔及利亚用于治疗各种疾病的一种药用植物,也具有重要的畜牧和生态价值。评估其对温度变化和土壤盐度的耐受性对于了解其在干旱和半干旱地区受盐影响的土地恢复中的潜在用途至关重要。本研究的目的是确定一种重要药用植物种子萌发的最佳温度,并评价其萌发和幼苗早期对盐胁迫和热胁迫的耐受程度。在阿尔及利亚杰尔法的Sed Rahal和阿尔及利亚瓦尔格拉的Oued N 'sa两个居群中采集了Anabasis articulata的种子。种子在7种盐度水平(0、100、200、300、400、500和600 mM)下发芽,并在8种温度(5、10、15、20、25、30、35、40和45℃)下孵育。研究了发芽动力学、发芽率、发芽率以及幼苗的茎长和根长。统计分析表明,盐度和温度变化对发芽和萌发后性状有显著影响。无盐条件下发芽率最高;盐胁迫延缓或限制了种子萌发过程和幼苗生长。高温(35-45°C)比低温(5-15°C)的负面影响更大。最佳温度范围为20 ~ 30°C。在这样的温度下,即使盐浓度为600 mM, Sed Rahal站的46 %种子能够发芽,Oued N 'sa站的21 %种子能够发芽。与Oued N 'sa相比,Sed Rahal表现出更高的最终发芽率、发芽率和幼苗生长,特别是在中等温度和较低盐度水平下,表现出更好的盐度和温度极端应变能力。Sed Rahal幼苗在低温下根长减少较多,而Oued N 'sa幼苗在高温下茎长减少较多。结果表明,该树种在萌芽期和苗期具有较强的生态适应性,适合于破坏生态系统和边缘地区的恢复。
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引用次数: 0
Ecology of endomycorrhizal association in black pepper (Piper nigrum L.), South India 南印度黑胡椒(Piper nigrum L.)内生菌根结合生态学
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-12-26 DOI: 10.1016/j.jarmap.2024.100617
Rositta Varghese , Joseph George Ray
Arbuscular mycorrhizal fungi (AMF) are crucial root symbionts that play a significant role in nutrient absorption, crop productivity, and soil health. However, it has become essential to understand the ideal environmental conditions that can maximize AMF benefits in crop yield and soil health as a valuable biofertilizer. Accordingly, a comprehensive ecological study of AMF in black pepper (Piper nigrum L.) fields was conducted. The study aimed to identify AMF diversity and population characteristics over a broad area of black pepper fields in Kerala, South India, and to analyse various factors influencing AMF symbiosis in crops. It also focused on identifying the agroclimatic, soil, and crop influencers that impact mycorrhizae in traditional crop fields. Altogether, nine genera and 29 AMF species are identified from the randomly sampled black pepper fields (of diverse varieties of the crop) that belong to two different soil orders and 13 different soil series in the region. Among them, three genera and 22 species were new reports from black pepper. Acaulospora laevis and Funneliformis badius were the most commonly found species. Seasonal analysis showed a significant increase in spore density during the monsoon season, while root colonization exhibited varying patterns. Correlational studies and principal component analysis enabled the identification of specific soil and plant factors individually and in combinations influencing mycorrhizal activities. Overall, the study underscores the significance of ecological research on AMF symbiosis in specific crops and specific soil systems.
丛枝菌根真菌(AMF)是重要的根系共生体,在养分吸收、作物生产力和土壤健康中起着重要作用。然而,了解理想的环境条件,可以最大限度地提高AMF作为一种有价值的生物肥料在作物产量和土壤健康方面的效益已经变得至关重要。据此,对黑胡椒田AMF进行了全面的生态学研究。该研究旨在确定印度南部喀拉拉邦黑胡椒田AMF的多样性和种群特征,并分析影响AMF在作物中共生的各种因素。它还侧重于确定影响传统作物地里菌根的农业气候、土壤和作物影响因素。从随机抽样的黑胡椒田间(不同品种的作物)共鉴定出9属29种AMF,属于该地区2个不同土壤目和13个不同土壤系列。其中黑胡椒属新报道3属22种。最常发现的种类为laevis Acaulospora laevis和badius funeliformis。季节分析表明,在季风季节孢子密度显著增加,而根定植表现出不同的模式。相关研究和主成分分析能够确定影响菌根活性的具体土壤和植物因素单独和组合。综上所述,本研究强调了AMF在特定作物和特定土壤系统中共生的生态学研究的重要性。
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引用次数: 0
Microsatellite marker resource creation, genetic diversity assessment and core prediction in Valeriana jatamansi Jones 芥蓝微卫星标记资源创建、遗传多样性评价及核心预测
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-12-26 DOI: 10.1016/j.jarmap.2024.100616
Amna Devi , Nirupma Kumari , Mamta Masand , Balraj Sharma , Aasim Majeed , Mohammed Saba Rahim , Sanatsujat Singh , Kamal Prasad Mohapatra , Ram Kumar Sharma
Valeriana jatamansi Jones, a potential ethno-medicinal herb of global importance faced an unprecedented threat of its habitat loss due to burgeoning global demand. Genome-wide microsatellites or simple sequence repeats (SSRs) marker resources are advantageous, unfortunately, such larger resources have not been explored for genetic improvement in V. jatamansi. In the present study, transcriptome-derived functionally relevant microsatellite marker resources comprising 7957 SSR markers with significant homology (66.3 %) with public functional databases were created. Interestingly, 103 putative functional SSR markers derived from unigenes exhibited substantial annotations with secondary metabolite biosynthesis, transcription factors, and transporters were synthesized and experimentally validated in diverse genotypes. SSR loci with good marker attributes (average alleles/ locus: 7.5; PIC: 0.44; resolving power: 5.25) were successfully utilized for genetic population structure analysis of 525 genotypes representing 29 geographically diverse populations. Despite representing three genetic populations, north-western Indian Himalayan regions (wIHR) exhibited with low genetic diversity (h: 0.22) with moderate gene flow (Nm: 0.97) and high molecular variance (71 %) within population. Moreover, the predicted core of 53 genotypes representing 21 diverse populations was validated successfully using NJ clustering and regression correlation (R2 > 0.85). Additionally, future habitat suitability is predicted to decline in at least 49.89 % habitat area of V. jatamansi. Hence, climatic zones with improved suitability can be potential geographical areas for its conservation and sustainable cultivation. The current findings including huge molecular markers resources, diversity inferences, and identification of core collections will facilitate gene bank management, selection of potential parental groups/ cultivars for implementation of molecular breeding strategies, genetic improvement, and sustainable cultivations of V. jatamansi for industrial utilization.
由于全球需求的迅速增长,具有全球重要意义的潜在民族药材缬草面临着前所未有的栖息地丧失威胁。全基因组微卫星或简单序列重复(SSRs)标记资源是有利的,不幸的是,这种更大的资源尚未被开发用于贾塔马西的遗传改良。本研究共构建了7957个与公共功能数据库具有显著同源性(66.3% %)的转录组衍生功能相关微卫星标记资源。有趣的是,从不同基因型中合成并实验验证了103个假设的功能SSR标记,这些标记显示了大量的次级代谢物生物合成、转录因子和转运蛋白。具有良好标记属性的SSR位点(平均等位基因数/位点:7.5;图片:0.44;分辨率为5.25),对29个不同地理种群的525个基因型进行了遗传群体结构分析。西北印度喜马拉雅地区(wIHR)虽然代表了三个遗传群体,但群体内遗传多样性低(h: 0.22),基因流适中(Nm: 0.97),分子变异高(71 %)。利用NJ聚类和回归相关(R2 >;0.85)。未来生境适宜性至少会在49.89 %的生境面积上下降。因此,适宜性较好的气候带可作为其保护和可持续栽培的潜在地理区域。目前的研究成果包括丰富的分子标记资源、多样性推断和核心种质的鉴定等,这些成果将为植物基因库的管理、潜在亲本群体/品种的选择和分子育种策略的实施、遗传改良以及产业化利用的可持续栽培提供依据。
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引用次数: 0
Ultrasound-assisted extraction of flavonoids from Rudbeckia hirta L. flowers using deep eutectic solvents: Optimization, HPLC analysis and anti-inflammatory activity 超声辅助深共溶溶剂提取水杨花总黄酮:优化、高效液相色谱分析及抗炎活性研究
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-12-25 DOI: 10.1016/j.jarmap.2024.100618
Jiang-Rui Wang , Yin-Long Li , Hai-Tao Zhang , Zhao-Bao Xiang , Jing Zuo , Bo Peng , Xing-Yu Liu , Hong Ou
A green and efficient ultrasound-assisted extraction (UAE) method using deep eutectic solvents (DESs) was developed to acquire flavonoids from Rudbeckia hirta L. flowers. Among 14 DESs synthesized from choline chloride and different hydrogen bond donors, choline chloride:ethylene glycol (1:2) was identified as the best for flavonoid extraction. Response surface methodology, adopted for parameter optimization of the DES-UAE method, revealed that the maximal total flavonoid content (TFC), at 37.41 ± 1.32 mg rutin equivalents/g dry mass, was extracted at 50 °C, a DES water content of 16 %, and 85 W ultrasonic power. DES-UAE increased the TFC and the antioxidant capacity of the extract while reducing the time, temperature, and ultrasonic power required for extraction when compared with conventional extraction techniques. HPLC analysis revealed that the replacement of DES for ethanol in UAE increased the contents of individual flavonoids of interest (quercetagitrin, patulitrin, patuletin, and quercetin) in the extracts in a range from 9.4 % to 24.4 %. The anti-inflammatory activity of the extract, assessed using a lipopolysaccharide-induced macrophage inflammation model, was substantially higher after using DES-UAE than after using traditional methods. The flavonoids present in the extract may be responsible for most of the anti-inflammatory activity of the R. hirta extract. In summary, DES-UAE is a sustainable and high-performance extraction procedure for the extraction of natural flavonoids from plants. Moreover, R. hirta can be regarded as a good resource for the isolation of natural anti-inflammatory agents and flavonoids.
建立了一种绿色高效的超声辅助提取方法——深共晶溶剂萃取法(DESs)。在以氯化胆碱和不同氢键给体合成的14种DESs中,以氯化胆碱:乙二醇(1:2)的比例提取黄酮类化合物效果最佳。采用响应面法对DES- uae法进行参数优化,结果表明,在50℃、DES水含量为16 %、超声功率为85 W的条件下,DES- uae法的最大总黄酮含量为37.41 ± 1.32 mg芦丁当量/g干质量。与传统提取技术相比,DES-UAE提高了提取物的TFC和抗氧化能力,同时减少了提取所需的时间、温度和超声波功率。HPLC分析表明,用乙醇代替DES后,槲皮苷、曲皮苷、曲皮素和槲皮素的含量增加了9.4% % ~ 24.4% %。通过脂多糖诱导的巨噬细胞炎症模型评估,DES-UAE提取物的抗炎活性明显高于传统方法。提取物中的黄酮类化合物可能是红叶姜提取物抗炎活性的主要原因。综上所述,DES-UAE是一种可持续、高效的提取植物中天然黄酮类化合物的方法。此外,红毛霉可以作为天然抗炎药和黄酮类化合物的良好分离资源。
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引用次数: 0
Assessment of genetic diversity and construction of core germplasm in populations of Acorus tatarinowii based on SNP markers 基于 SNP 标记评估遗传多样性和构建大菱鲆种群核心种质
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-11-23 DOI: 10.1016/j.jarmap.2024.100605
Qian Qin, Yanjing Dong, Jiaqi He, Jialong Chen, Danyang Wu, Shouwen Zhang
Acorus tatarinowii is a natural medicinal plant integral to traditional aromatic therapies. It is commonly employed in the treatment of depression, epilepsy, and Alzheimer's disease due to its significant medicinal and aromatic properties. However, the genetic diversity of wild A. tatarinowii resources has declined due to over-exploitation and habitat destruction. This study aims to assess the genetic diversity of the natural populations of A. tatarinowii, establish a core germplasm bank, explore its genetic richness and uniqueness, prevent genetic erosion, and identify beneficial genes. In this study, for the first time, 429A. tatarinowii samples from 40 populations were analyzed for genetic diversity and population structure using Hyper-Seq technology. A total of 4772,850 high-quality Single Nucleotide Polymorphisms (SNPs) and 1563,000 Insertions and Deletions (InDels) variant loci were identified, with C/T as the predominant variant type and a Ts/Tv ratio of 1.079. Annotation of these loci indicated that the majority of variants occurring in intergenic regions, accounting for 50.59 % of the total. Moreover, the heterozygosity, nucleotide diversity, and FST of A. tatarinowii suggested low genetic diversity within this species within the populations. The analysis of molecular variance (AMOVA) revealed that the population variation of A. tatarinowii is mainly caused by the variation between populations (72.06 %), while the variation within populations only contributes a small part (27.94 %) Through NJ tree, PCA, and ADMIXTURE analyses, the 429A. tatarinowii samples were classified into five subgroups, with some genetic exchange observed. A total of 7163 high-quality polymorphic SNPs were identified, and a core germplasm consisting of 85 samples was established, achieving genotype retention rates similar to those of the original germplasm. This indicates that a smaller number of germplasm resources can effectively represent the majority of the genetic diversity. Additionally, PCA analysis further confirmed the representativeness and validity of the constructed core germplasm resources. Furthermore, the DNA fingerprints of the 429 accessions were established using the most effective combinations of 26 SNP markers, which served as specific markers to effectively distinguish all samples. In conclusion, these findings offer valuable insights into the genetic structure of A. tatarinowii, facilitating the identification of high-quality genes and providing a scientific foundation for the development of breeding programs and conservation strategies for A. tatarinowii.
唐菖蒲是传统芳香疗法中不可或缺的天然药用植物。由于其显著的药用和芳香特性,它通常被用于治疗抑郁症、癫痫和老年痴呆症。然而,由于过度开发和栖息地破坏,野生 A. tatarinowii 资源的遗传多样性已经下降。本研究旨在评估 A. tatarinowii 自然种群的遗传多样性,建立核心种质库,探索其遗传丰富性和独特性,防止遗传侵蚀,并鉴定有益基因。本研究首次利用 Hyper-Seq 技术分析了来自 40 个种群的 429 个 A. tatarinowii 样本的遗传多样性和种群结构。共鉴定出 4772850 个高质量单核苷酸多态性(SNPs)和 1563000 个插入和缺失(InDels)变异位点,其中 C/T 为主要变异类型,Ts/Tv 比为 1.079。对这些位点的注释表明,大多数变异发生在基因间区域,占总数的 50.59%。此外,A. tatarinowii 的杂合度、核苷酸多样性和 FST 表明该物种在种群内的遗传多样性较低。分子方差分析(AMOVA)显示,A. tatarinowii的种群变异主要由种群间的变异引起(72.06%),而种群内的变异只占一小部分(27.94%)。通过NJ树、PCA和ADMIXTURE分析,429个A. tatarinowii样本被分为5个亚群,并观察到一些遗传交换。共鉴定出 7163 个高质量多态 SNPs,并建立了由 85 个样本组成的核心种质,其基因型保留率与原始种质相似。这表明,数量较少的种质资源也能有效代表大部分遗传多样性。此外,PCA 分析进一步证实了所构建的核心种质资源的代表性和有效性。此外,利用 26 个 SNP 标记的最有效组合,建立了 429 个样本的 DNA 指纹,这些标记作为特异性标记可有效区分所有样本。总之,这些研究结果为了解 A. tatarinowii 的遗传结构提供了宝贵的信息,有助于鉴定优质基因,并为制定 A. tatarinowii 的育种计划和保护策略提供了科学依据。
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引用次数: 0
Findings on the heavy metal content in herbal drugs and essential oils – An updated database evaluation 草药和精油中重金属含量的调查结果-更新的数据库评估
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-11-22 DOI: 10.1016/j.jarmap.2024.100609
Gerald Binder , Matthias Knödler , Bernhard Klier , Patricia Zang , Hagen Albert , Alexandra Barofsky , Barbara Steinhoff
In order to guarantee the safety of patients and consumers, the European legal framework restricts the content of heavy metals and further elements in plant material used for the production of medicinal and food products. This data evaluation comprises findings on seven elements between 2016 and 2021 which were assessed against the requirements of the European Pharmacopoeia (Ph.Eur.) and the ICH Q3D guideline on elemental impurities. !5.328 herbal drug samples from 427 products and 537 essential oil samples from 25 products were included in this evaluation which demonstrates that the Ph. Eur. limits set for cadmium, lead and mercury are considered appropriate. Samples from organic production revealed a lower occurrence of cadmium, lead and mercury as compared to samples from conventional production. With regard to the ICH Q3D requirements, none of the herbal drug samples exceeded the respective limit for cobalt, nickel and vanadium, while for arsenic higher values were observed in individual cases. A comparison of the findings with a former period of evaluation showed an increase in positive findings and also a few more exceedances of the Ph.Eur. limits. For essential oils, it can be confirmed that independent from the production process, the probability of heavy metal contamination is low.
为了保证患者和消费者的安全,欧洲法律框架限制了用于生产医药和食品的植物材料中的重金属和其他元素含量。本数据评估包括 2016 年至 2021 年期间对七种元素的检测结果,并根据《欧洲药典》(Ph.Eur.)和 ICH Q3D 元素杂质指南的要求进行了评估。来自 427 个产品的 5.328 个草药样品和来自 25 个产品的 537 个精油样品被纳入评估范围,这表明《欧洲药典》对镉、铅和汞的限制是适当的。与传统生产的样品相比,有机生产的样品中镉、铅和汞的含量较低。根据 ICH Q3D 的要求,所有中草药样品中的钴、镍和钒都没有超过相应的限值,而砷的限值在个别情况下较高。与前一阶段的评估结果相比,阳性结果有所增加,同时也发现了一些超出欧洲药典限值的情况。对于精油来说,可以确认的是,与生产过程无关,重金属污染的可能性很低。
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引用次数: 0
Identification and codification of phenological stages of the karonda (Carissa carandas L.) according to the BBCH scale 根据BBCH分级法鉴定和编纂香花莲物候阶段
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-11-22 DOI: 10.1016/j.jarmap.2024.100607
Bommanahalli Munivenkate Gowda Muralidhara , Abalavadi Thammaiah Rani , Gandrajapally Shivareddy Madhu , Gangappa Nayan Deepak , Rajendiran Selladurai , Siddanna Savadi , Ganeshan Karunakaran , Prakash Chandra Tripathi , Thandavarajan Sakthivel , Polappati Mohan Mithun , Damodhar Deekshith
Karonda is a nutritive and medicinally important wild fruit crop cultivated mainly in Asian countries. The plant and its produce are widely used in the Indian tribe’s medicine, Ayurveda, Unani, and Homoeopathic system of medicines. However, its phenological stages have not yet been defined systematically. In this study, the important phenological growth stages of karonda occurring during an annual growth cycle were identified and described using a three- digits extended BBCH (Biologische Bundesantalt, Bundessortenamt und Chemische Industrie) scale. A total of 38 secondary growth stages encompassing the 7 principal growth stages were identified and described as per the BBCH scale. The seven principal growth stages identified include three vegetative stages (bud, leaf and shoot development), two flowering stages (inflorescence emergence and flower development) and two fruiting stages (fruit development and maturity). Besides, the physicochemical changes occurring during fruit development and maturity stages were studied. The fruit weight, total soluble solids and iron content increased gradually during fruit development stages starting from 701 stage and reaching maximum at the 819 stage. Further, the important insect pests were documented from 010 to 819 stages. The insect pests such as defoliator and shoot webber cum borer were belonging to the Sphingidae and Tortricidae families respectively, were most commonly observed. The detailed description of phenological stages based on BBCH scale, information of physicochemical changes and insect pests generated in this study will help for scientific cultivation of karonda especially in scheduling crop production and crop protection practices. Besides, the developed BBCH scale can be a useful tool for characterization of germplasm in the gene banks and understanding the effect of climatic changes on karonda production.
卡隆达是一种营养和药用重要的野生水果作物,主要种植在亚洲国家。该植物及其产品广泛用于印度部落的药物,阿育吠陀,乌纳尼和顺势疗法系统的药物。然而,其物候阶段尚未被系统地定义。本研究采用三位数扩展的BBCH (Biologische Bundesantalt, Bundessortenamt和Chemische Industrie)尺度,确定并描述了卡隆达在年生长周期中发生的重要物候生长阶段。根据BBCH量表,共确定了38个次生生长阶段,其中包括7个主要生长阶段。确定的七个主要生长阶段包括三个营养阶段(芽、叶和芽发育),两个开花阶段(花序出现和花发育)和两个结果阶段(果实发育和成熟)。此外,还研究了果实发育和成熟期的理化变化。果实重、可溶性固形物总量和铁含量从701期开始逐渐增加,在819期达到最大值。在第010 ~ 819个阶段记录了重要害虫。其中,最常见的害虫分别为刺虫科和刺虫科。基于BBCH尺度的物候阶段详细描述、理化变化信息和害虫信息,将有助于科学栽培,特别是作物生产计划和作物保护措施。此外,所建立的BBCH量表可作为种质资源鉴定和了解气候变化对卡隆达生产影响的有效工具。
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引用次数: 0
Molecular authentication of Paeonia species for paeonia radix production using plastid and nuclear DNA markers 利用质体和核 DNA 标记对生产芍药的芍药品种进行分子鉴定
IF 3.8 2区 农林科学 Q1 PLANT SCIENCES Pub Date : 2024-11-16 DOI: 10.1016/j.jarmap.2024.100604
Jiseok Kim , Jong-Soo Kang , Hyun-Seung Park , Jae-Hyeon Jeon , Jee Young Park , Eunbi Yeo , Jung Hwa Kang , Seung Hyun Kim , Do Won Jeong , Young-Sik Kim , Hocheol Kim , Woojong Jang , Goya Choi , Byeong Cheol Moon , Tae-Jin Yang
Paeonia lactiflora is a perennial herbaceous plant popular in oriental medicine and as an ornamental plant. Two related species, P. veitchii and P. obovata, share several medicinal uses with P. lactiflora. To develop a molecular authentication system for these three Paeonia species, which are used to produce the Chinese herbal medicine Paeonia Radix, we generated super-barcode information. This included complete plastid genomes (plastomes) and 45S nuclear ribosomal DNA (45S nrDNA) from two accessions of P. lactiflora and one accession each of P. veitchii and P. obovata, using whole-genome sequencing data. The four plastomes range from 152,519 to 152,731 base pairs (bp) in length and have the same gene content and order. The 45S nrDNA transcriptional units range from 5879 to 6315 bp in length and show 33 SNPs among the three species. Phylogenetic analyses based on plastome and 45S nrDNA sequences clearly identified each species as a monophyletic group. Inter- and intraspecific polymorphisms were discovered among these three Paeonia species and Paeonia suffruticosa. Four molecular markers were developed to discriminate between P. lactiflora, P. veitchii, P. obovata, and P. suffruticosa, the main species used to produce Paeonia Radix in Korea and China. These markers successfully authenticated the species when applied to multiple herbal samples collected from various origins.
芍药(Paeonia lactiflora)是一种多年生草本植物,在东方医学中很受欢迎,也可作为观赏植物。两个相关物种 P. veitchii 和 P. obovata 与乳花芍药有多种药用价值。为了开发这三个芍药物种的分子鉴定系统,我们生成了超级条形码信息。通过全基因组测序数据,我们获得了乳花芍药(P. lactiflora)的两个品系以及芍药(P. veitchii)和芍药(P. obovata)各一个品系的完整质粒基因组(质粒)和 45S 核核糖体 DNA(45S nrDNA)。四个质粒的长度从 152,519 碱基对(bp)到 152,731 碱基对(bp)不等,基因含量和排列顺序相同。45S nrDNA转录单元长度为 5879 至 6315 bp,在三个物种中出现了 33 个 SNP。基于质体和 45S nrDNA 序列的系统进化分析清楚地将每个物种确定为一个单系群。在这三个芍药物种和芍药suffruticosa之间发现了种间和种内多态性。研究人员开发了四种分子标记,用于区分韩国和中国用于生产芍药的主要品种 P. lactiflora、P. veitchii、P. obovata 和 P. suffruticosa。将这些标记应用于从不同产地采集的多个药材样本时,成功地鉴定了物种。
{"title":"Molecular authentication of Paeonia species for paeonia radix production using plastid and nuclear DNA markers","authors":"Jiseok Kim ,&nbsp;Jong-Soo Kang ,&nbsp;Hyun-Seung Park ,&nbsp;Jae-Hyeon Jeon ,&nbsp;Jee Young Park ,&nbsp;Eunbi Yeo ,&nbsp;Jung Hwa Kang ,&nbsp;Seung Hyun Kim ,&nbsp;Do Won Jeong ,&nbsp;Young-Sik Kim ,&nbsp;Hocheol Kim ,&nbsp;Woojong Jang ,&nbsp;Goya Choi ,&nbsp;Byeong Cheol Moon ,&nbsp;Tae-Jin Yang","doi":"10.1016/j.jarmap.2024.100604","DOIUrl":"10.1016/j.jarmap.2024.100604","url":null,"abstract":"<div><div><em>Paeonia lactiflora</em> is a perennial herbaceous plant popular in oriental medicine and as an ornamental plant. Two related species, <em>P. veitchii</em> and <em>P. obovata</em>, share several medicinal uses with <em>P. lactiflora</em>. To develop a molecular authentication system for these three <em>Paeonia</em> species, which are used to produce the Chinese herbal medicine Paeonia Radix, we generated super-barcode information. This included complete plastid genomes (plastomes) and 45S nuclear ribosomal DNA (45S nrDNA) from two accessions of <em>P. lactiflora</em> and one accession each of <em>P. veitchii</em> and <em>P. obovata</em>, using whole-genome sequencing data. The four plastomes range from 152,519 to 152,731 base pairs (bp) in length and have the same gene content and order. The 45S nrDNA transcriptional units range from 5879 to 6315 bp in length and show 33 SNPs among the three species. Phylogenetic analyses based on plastome and 45S nrDNA sequences clearly identified each species as a monophyletic group. Inter- and intraspecific polymorphisms were discovered among these three <em>Paeonia</em> species and <em>Paeonia suffruticosa</em>. Four molecular markers were developed to discriminate between <em>P. lactiflora</em>, <em>P. veitchii</em>, <em>P. obovata</em>, and <em>P. suffruticosa</em>, the main species used to produce Paeonia Radix in Korea and China. These markers successfully authenticated the species when applied to multiple herbal samples collected from various origins.</div></div>","PeriodicalId":15136,"journal":{"name":"Journal of Applied Research on Medicinal and Aromatic Plants","volume":"44 ","pages":"Article 100604"},"PeriodicalIF":3.8,"publicationDate":"2024-11-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142723019","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Journal of Applied Research on Medicinal and Aromatic Plants
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