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Breath analysis combined with cardiopulmonary exercise testing and echocardiography for monitoring heart failure patients: the AEOLUS protocol. 呼吸分析结合心肺运动试验和超声心动图监测心力衰竭患者:AEOLUS方案。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-08-09 DOI: 10.1088/1752-7163/acec08
Denise Biagini, Nicola Riccardo Pugliese, Federico Vivaldi, Silvia Ghimenti, Alessio Lenzi, Francesca De Angelis, Matyas Ripszam, Tobias Bruderer, Silvia Armenia, Federica Cappelli, Stefano Taddei, Stefano Masi, Fabio Di Francesco, Tommaso Lomonaco

This paper describes the AEOLUS pilot study which combines breath analysis with cardiopulmonary exercise testing (CPET) and an echocardiographic examination for monitoring heart failure (HF) patients. Ten consecutive patients with a prior clinical diagnosis of HF with reduced left ventricular ejection fraction were prospectively enrolled together with 15 control patients with cardiovascular risk factors, including hypertension, type II diabetes or chronic ischemic heart disease. Breath samples were collected at rest and during CPET coupled with exercise stress echocardiography (CPET-ESE) protocol by means of needle trap micro-extraction and were analyzed through gas-chromatography coupled with mass spectrometry. The protocol also involved using of a selected ion flow tube mass spectrometer for a breath-by-breath isoprene and acetone analysis during exercise. At rest, HF patients showed increased breath levels of acetone and pentane, which are related to altered oxidation of fatty acids and oxidative stress, respectively. A significant positive correlation was observed between acetone and the gold standard biomarker NT-proBNP in plasma (r= 0.646,p< 0.001), both measured at rest. During exercise, some exhaled volatiles (e.g., isoprene) mirrored ventilatory and/or hemodynamic adaptation, whereas others (e.g., sulfide compounds and 3-hydroxy-2-butanone) depended on their origin. At peak effort, acetone levels in HF patients differed significantly from those of the control group, suggesting an altered myocardial and systemic metabolic adaptation to exercise for HF patients. These preliminary data suggest that concomitant acquisition of CPET-ESE and breath analysis is feasible and might provide additional clinical information on the metabolic maladaptation of HF patients to exercise. Such information may refine the identification of patients at higher risk of disease worsening.

本文介绍了AEOLUS将呼吸分析与心肺运动试验(CPET)和超声心动图检查相结合用于监测心力衰竭(HF)患者的初步研究。前瞻性纳入10例既往临床诊断为HF并左室射血分数降低的连续患者,以及15例具有心血管危险因素(包括高血压、II型糖尿病或慢性缺血性心脏病)的对照患者。采用针阱微萃取法采集静息时和CPET联合运动应激超声心动图(CPET- ese)期间的呼气样本,并通过气相色谱-质谱联用分析。该方案还涉及使用选定的离子流管质谱仪在运动期间进行呼气异戊二烯和丙酮分析。静息时,HF患者呼吸中丙酮和戊烷水平升高,这分别与脂肪酸氧化改变和氧化应激有关。丙酮与血浆金标准生物标志物NT-proBNP之间存在显著正相关(r= 0.646,p< 0.001)。在运动过程中,一些呼出的挥发物(如异戊二烯)反映了通气和/或血流动力学的适应,而另一些(如硫化物和3-羟基-2-丁酮)则取决于它们的来源。心力衰竭患者的丙酮水平与对照组显著不同,表明心力衰竭患者的心肌和全身代谢对运动的适应发生了改变。这些初步数据表明,同时获取CPET-ESE和呼吸分析是可行的,并可能为心力衰竭患者对运动的代谢不适应提供额外的临床信息。这类信息可能有助于确定疾病恶化风险较高的患者。
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引用次数: 1
Oxylipin concentration shift in exhaled breath condensate (EBC) of SARS-CoV-2 infected patients. SARS-CoV-2 感染者呼出气体冷凝物(EBC)中的氧脂素浓度变化。
IF 3.7 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-08-07 DOI: 10.1088/1752-7163/acea3d
Eva Borras, Mitchell M McCartney, Dante E Rojas, Tristan L Hicks, Nam K Tran, Tina Tham, Maya M Juarez, Lisa Franzi, Richart W Harper, Cristina E Davis, Nicholas J Kenyon

Infection of airway epithelial cells with severe acute respiratory coronavirus 2 (SARS-CoV-2) can lead to severe respiratory tract damage and lung injury with hypoxia. It is challenging to sample the lower airways non-invasively and the capability to identify a highly representative specimen that can be collected in a non-invasive way would provide opportunities to investigate metabolomic consequences of COVID-19 disease. In the present study, we performed a targeted metabolomic approach using liquid chromatography coupled with high resolution chromatography (LC-MS) on exhaled breath condensate (EBC) collected from hospitalized COVID-19 patients (COVID+) and negative controls, both non-hospitalized and hospitalized for other reasons (COVID-). We were able to noninvasively identify and quantify inflammatory oxylipin shifts and dysregulation that may ultimately be used to monitor COVID-19 disease progression or severity and response to therapy. We also expected EBC-based biochemical oxylipin changes associated with COVID-19 host response to infection. The results indicated ten targeted oxylipins showing significative differences between SAR-CoV-2 infected EBC samples and negative control subjects. These compounds were prostaglandins A2 and D2, LXA4, 5-HETE, 12-HETE, 15-HETE, 5-HEPE, 9-HODE, 13-oxoODE and 19(20)-EpDPA, which are associated with specific pathways (i.e. P450, COX, 15-LOX) related to inflammatory and oxidative stress processes. Moreover, all these compounds were up-regulated by COVID+, meaning their concentrations were higher in subjects with SAR-CoV-2 infection. Given that many COVID-19 symptoms are inflammatory in nature, this is interesting insight into the pathophysiology of the disease. Breath monitoring of these and other EBC metabolites presents an interesting opportunity to monitor key indicators of disease progression and severity.

气道上皮细胞感染严重急性呼吸道冠状病毒 2(SARS-CoV-2)会导致严重的呼吸道损伤和缺氧性肺损伤。对下呼吸道进行无创采样具有挑战性,而确定一种能以无创方式收集的高代表性标本的能力将为研究 COVID-19 疾病的代谢组学后果提供机会。在本研究中,我们采用液相色谱-高分辨色谱法(LC-MS)对从住院的 COVID-19 患者(COVID+)和阴性对照组(包括非住院和因其他原因住院的患者(COVID-))收集的呼出气体冷凝物(EBC)进行了有针对性的代谢组学研究。我们能够无创识别和量化炎性氧化脂蛋白的变化和失调,最终可用于监测 COVID-19 疾病的进展或严重程度以及对治疗的反应。我们还预计基于 EBC 的生化氧脂素变化与 COVID-19 宿主对感染的反应有关。结果表明,在感染 SAR-CoV-2 的 EBC 样本与阴性对照组之间,有 10 种目标氧脂素存在显著差异。这些化合物是前列腺素 A2 和 D2、LXA4、5-HETE、12-HETE、15-HETE、5-HEPE、9-HODE、13-oxoODE 和 19(20)-EpDPA,它们与炎症和氧化应激过程相关的特定途径(即 P450、COX、15-LOX)有关。此外,所有这些化合物都被 COVID+ 上调,这意味着它们在感染 SAR-CoV-2 的受试者中浓度更高。鉴于 COVID-19 的许多症状本质上都是炎症性的,这是对该疾病病理生理学的有趣见解。对这些代谢物和其他 EBC 代谢物的呼吸监测为监测疾病进展和严重程度的关键指标提供了一个有趣的机会。
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引用次数: 0
Publisher's Note: 'Revisiting the Rationale of Mandatory Masking' (2023J. Breath Res. 4 042001). 出版者注:"重新审视强制掩蔽的理由"(2023J. 呼吸研究 4 042001)。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-08-07 DOI: 10.1088/1752-7163/acea72
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引用次数: 0
Revisiting the rationale of mandatory masking. 重新审视强制掩蔽的理由。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-08-07 DOI: 10.1088/1752-7163/acdf12
Jonathan D Beauchamp, Chris A Mayhew

In this perspective, we review the evidence for the efficacy of face masks to reduce the transmission of respiratory viruses, specifically severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), and consider the value of mandating universal mask wearing against the widespread negative impacts that have been associated with such measures. Before the SARS-CoV-2 pandemic, it was considered that there was little to no benefit in healthy people wearing masks as prophylaxis against becoming infected or as unwitting vectors of viral transmission. This accepted policy was hastily reversed early on in the pandemic, when districts and countries throughout the world imposed stringent masking mandates. Now, more than three years since the start of the pandemic, the amassed studies that have investigated the use of masks to reduce transmission of SARS-CoV-2 (or other pathogens) have led to conclusions that are largely inconsistent and contradictory. There is no statistically significant or unambiguous scientific evidence to justify mandatory masking for general, healthy populations with the intention of lessening the viral spread. Even if mask wearing could potentially reduce the transmission of SARS-CoV-2 in individual cases, this needs to be balanced against the physical, psychological and social harms associated with forced mask wearing, not to mention the negative impact of innumerable disposed masks entering our fragile environment. Given the lack of unequivocal scientific proof that masks have any effect on reducing transmission, together with the evident harms to people and the environment through the use of masks, it is our opinion that the mandatory use of face masks in the general population is unjustifiable and must be abandoned in future pandemic countermeasures policies.

在这篇文章中,我们回顾了口罩对减少呼吸道病毒(特别是严重急性呼吸系统综合症冠状病毒 2(SARS-CoV-2))传播的有效性证据,并考虑了强制要求普遍佩戴口罩的价值,以及与此类措施相关的广泛负面影响。在 SARS-CoV-2 大流行之前,人们认为健康人戴口罩预防感染或作为病毒传播的无意载体几乎没有任何益处。这一公认的政策在疫情初期被匆忙推翻,当时世界各地区和国家都规定了严格的戴口罩要求。现在,大流行已经开始三年多了,对使用口罩减少 SARS-CoV-2(或其他病原体)传播的大量研究得出的结论基本上是不一致和相互矛盾的。目前还没有具有统计意义或明确无误的科学证据来证明强制普通健康人群佩戴口罩以减少病毒传播的合理性。即使在个别情况下戴口罩有可能减少 SARS-CoV-2 的传播,也需要权衡强制戴口罩带来的身体、心理和社会危害,更不用说无数废弃口罩进入我们脆弱的环境所造成的负面影响了。鉴于没有明确的科学证据证明口罩对减少传播有任何作用,加上使用口罩对人和环境造成的明显危害,我们认为,在一般人群中强制使用口罩是不合理的,在今后的大流行病对策政策中必须放弃。
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引用次数: 0
Effect of immune responses on breath methane dynamics. 免疫反应对呼吸甲烷动力学的影响。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-08-03 DOI: 10.1088/1752-7163/ace9f2
Daniela Polag, Frank Keppler

Methane (CH4) which can be detected in human breath has long been exclusively associated with anaerobic microbial activity (methanogenesis) in the gastrointestinal tract. However, recent studies challenge this understanding by revealing that CH4might also be produced endogenously in cells through oxidative-reductive stress reactions. Consequently, variations in breath CH4levels compared to an individual's baseline level might indicate enhanced oxidative stress levels, and, therefore, monitoring breath CH4levels might offer great potential for 'in vivo' diagnostics such as disease diagnosis, monitoring the efficacy of treatments, or during the application of personalized medicine. To evaluate the effects from immune responses triggered by infections, inflammations, and induced perturbation by vaccination on CH4dynamics in breath, two subjects were monitored over a period of almost 2 years. Breath CH4levels were measured by gas chromatography equipped with a flame-ionization detector. Both subjects exhibited significant deviations (positive and negative, respectively) from their normal CH4breath levels during periods of potential enhanced immune activity. Deviations from the 'healthy state' were indicated by the exceeding of individual CH4ranges. Moreover, for the first time we could clearly prove CH4degradation induced through vaccination by measuring stable carbon isotopes of CH4using gas chromatograph-combustion-isotope ratio mass spectrometry. Hence, breath CH4concentration and isotopic analyses may be used as a biomarker to evaluate specific immune responses and individual immune states.

长期以来,人类呼吸中可检测到的甲烷(CH4)仅与胃肠道中的厌氧微生物活动(甲烷生成)有关。然而,最近的研究挑战了这一认识,揭示了ch4也可能通过氧化-还原应激反应在细胞内内源性产生。因此,与个体基线水平相比,呼吸ch4水平的变化可能表明氧化应激水平增强,因此,监测呼吸ch4水平可能为“体内”诊断提供巨大潜力,如疾病诊断、监测治疗效果或在个性化医疗应用期间。为了评估感染、炎症和疫苗接种引起的免疫反应对呼吸中ch4动力学的影响,对两名受试者进行了近2年的监测。呼吸ch4水平通过配备火焰电离检测器的气相色谱法测量。在潜在的免疫活性增强期间,两名受试者都表现出与正常ch4呼吸水平的显著偏差(分别为阳性和阴性)。偏离“健康状态”的表现是超出个体ch4的范围。此外,通过气相色谱-燃烧-同位素比质谱法测定ch4的稳定碳同位素,我们首次能够明确地证明疫苗引起的ch4降解。因此,呼吸ch4浓度和同位素分析可作为评估特定免疫反应和个体免疫状态的生物标志物。
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引用次数: 0
Food and lifestyle impact on breath VOCs using portable mass spectrometer-pilot study across European countries. 食物和生活方式对呼吸中挥发性有机化合物的影响-使用便携式质谱-在欧洲国家进行试点研究。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-07-31 DOI: 10.1088/1752-7163/ace8b1
Milena Aleksić, Andrea Simeon, Djordje Vujić, Stamatios Giannoukos, Boris Brkic

In the modern world, many people are changing old dietary and lifestyle habits to improve the quality of their living-to treat or just prevent possible diseases. The main goal of this pilot study was to assess the food and lifestyle impact on exhaled breath volatile organic compounds (VOCs) in various population groups. It was done by employing a recently validated portable membrane-inlet mass spectrometer-MIMS. Thus, the obtained results would also represent the additional confirmation for the employment of the new instrument in the breath analysis. The pilot study involved 151 participants across Europe, including people with overweight, obesity, type 2 diabetes mellitus, cardiovascular disease, people with poor-quality diet and professional athletes. Exhaled breath acetone, ethanol, isoprene, and n-pentane levels were determined in samples before the meal, and 120 min after the meal. Obtained basal ppbvvalues were mainly in accordance with previously reported, which confirms that MIMS instrument can be used in the breath analysis. Combining the quantified levels along with the information about the participants' lifestyle habits collected via questionnaire, an assessment of the food and lifestyle impact was obtained. Notable alteration in examined VOC levels upon meal consumption was detected in more than 70% of all participants, with exception for isoprene, which was affected in about half of participants. Lifestyle parameters impact was examined using statistical analysis of variance (ANOVA) on ranks test. Statistically significant differences in basal breath VOC levels were observed among all examined population groups. Also, n-pentane and ethanol levels significantly differed in people of different ages, as well as acetone levels in people with different physical activity habits. These findings are promising for further, more focused research using MIMS technique in breath analysis.

在现代世界,许多人正在改变旧的饮食和生活习惯,以提高他们的生活质量——治疗或只是预防可能的疾病。本初步研究的主要目的是评估食物和生活方式对不同人群呼出的挥发性有机化合物(VOCs)的影响。采用了最近验证的便携式膜入口质谱仪- mims。因此,所获得的结果也代表了在呼吸分析中使用新仪器的额外确认。这项试点研究涉及欧洲各地的151名参与者,其中包括超重、肥胖、2型糖尿病、心血管疾病、饮食质量差的人和专业运动员。在餐前和餐后120分钟测定样品中呼出的丙酮、乙醇、异戊二烯和正戊烷的水平。得到的基础ppbv值与文献报道基本一致,证实了MIMS仪器可用于呼吸分析。将量化的水平与通过问卷收集的有关参与者生活习惯的信息相结合,获得了对食物和生活方式影响的评估。在所有参与者中,超过70%的人在用餐时检测到VOC水平的显著变化,但异戊二烯除外,约有一半的参与者受到影响。采用秩次检验的方差统计分析(ANOVA)检验生活方式参数的影响。在所有被检查的人群中,基础呼吸VOC水平有统计学上的显著差异。此外,不同年龄人群的正戊烷和乙醇水平也存在显著差异,不同运动习惯人群的丙酮水平也存在显著差异。这些发现为在呼吸分析中使用MIMS技术进行进一步的、更有针对性的研究提供了希望。
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引用次数: 0
Cross-validation of the peppermint benchmarking experiment across three analytical platforms. 跨三个分析平台的薄荷基准实验交叉验证。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-07-31 DOI: 10.1088/1752-7163/ace8b2
Y Lan Pham, Ruyi Yu, Jonathan D Beauchamp

The Peppermint Experiment is a breath analysis benchmarking initiative that seeks to address the lack of inter-comparability of outcomes across independent breath biomarker studies. In this experiment, the washout profiles of volatile terpene constituents of encapsulated peppermint oil (mainlyα-pinene,β-pinene, limonene and 1,8-cineole) in exhaled breath are characterized through a series of measurements at defined sampling intervals up to 6 h after ingestion of the capsule. In the present work, the Peppermint Experiment was carried out on a cohort of volunteers (n= 11) that provided breath samples in three sittings on different days (i.e. triplicates per volunteer) for concurrent analysis by three different analytical platforms. These platforms were proton transfer reaction-time-of-flight-mass spectrometry (PTR-TOFMS) interfaced with a buffered end-tidal (BET) breath sampler, gas chromatography-ion mobility spectrometry (GC-IMS) in conjunction with a compatible handheld direct breath sampler, and thermal desorption comprehensive two-dimensional gas chromatography-time-of-flight-mass spectrometry (TD-GC×GC-TOFMS) with a Respiration Collection forin-vitroAnalysis (ReCIVA) system for trapping breath volatiles onto adsorbent tubes. Regression analysis yielded mean washout times across the cohort of 448 min (PTR-TOFMS and GC-IMS) and 372 min (TD-GC×GC-TOFMS), which are in good alignment with published benchmark values. Large variations in washout profiles were observed at the individuals level, both between (inter-individual) and within (intra-individual) participants, indicating high variability in the degree of absorption, distribution, metabolism and excretion of volatile terpenes in the body within individuals and across the cohort. The comparably low inter-instrument variability indicates that differences in benchmark values from independent studies reported in the literature are driven by biological variability rather than different performances between sampling methods or analytical platforms.

薄荷实验是一项呼吸分析基准计划,旨在解决独立呼吸生物标志物研究结果缺乏相互可比性的问题。在本实验中,通过在摄入胶囊后6小时内的一系列采样间隔测量,表征了胶囊薄荷油中挥发性萜烯成分(主要是α-蒎烯、β-蒎烯、柠檬烯和1,8-桉树脑)在呼出气体中的洗脱曲线。在目前的工作中,薄荷实验是在一组志愿者(n= 11)身上进行的,他们在不同的日子里提供了三次呼吸样本(即每个志愿者三次),用于三个不同的分析平台同时分析。这些平台是质子转移反应-飞行时间质谱(PTR-TOFMS)与缓冲潮汐末(BET)呼吸采样器接口,气相色谱-离子迁移谱(GC-IMS)与兼容的手持式直接呼吸采样器结合,热解吸综合二维气相色谱-飞行时间质谱(TD-GC×GC-TOFMS)与呼吸收集体外分析(ReCIVA)系统捕获呼吸挥发物到吸附管。回归分析得出整个队列的平均洗脱时间为448分钟(PTR-TOFMS和GC-IMS)和372分钟(TD-GC×GC-TOFMS),这与公布的基准值很好地一致。在个体水平上,(个体间)和(个体内)参与者之间观察到水洗谱的巨大差异,表明个体和整个队列中挥发性萜烯在体内的吸收、分布、代谢和排泄程度的高度可变性。仪器间相对较低的可变性表明,文献中报道的独立研究中基准值的差异是由生物可变性驱动的,而不是采样方法或分析平台之间的不同表现。
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引用次数: 0
Lactate in exhaled breath condensate and its correlation to cancer: challenges, promises and a call for data. 呼出冷凝水中的乳酸及其与癌症的关系:挑战,承诺和对数据的呼吁。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-07-28 DOI: 10.1088/1752-7163/ace647
Vera Ruzsanyi, Miklós Péter Kalapos

Owing to its connection to cancer metabolism, lactate is a compound that has been a focus of interest in field of cancer biochemistry for more than a century. Exhaled breath volatile organic compounds (VOCs) and condensate analyses can identify and monitor volatile and non-VOCs, respectively, present in exhaled breath to gain information about the health state of an individual. This work aims to take into account the possible use of breath lactate measurements in tumor diagnosis and treatment control, to discuss technical barriers to measurement, and to evaluate directions for the future improvement of this technique. The use of exhaled breath condensate (EBC) lactic acid levels in disorders other than cancer is also discussed in brief. Whilst the use of EBC for the detection of lactate in exhaled breath is a promising tool that could be used to monitor and screen for cancer, the reliability and sensitivity of detection are uncertain, and hence its value in clinical practice is still limited. Currently, lactate present in plasma and EBC can only be used as a biomarker for advanced cancer, and therefore it presently has limited differential diagnostic importance and is rather of prognostic value.

一个多世纪以来,乳酸盐一直是癌症生物化学领域关注的焦点,因为它与癌症代谢有关。呼气挥发性有机化合物(VOCs)和冷凝物分析可以分别识别和监测呼气中存在的挥发性和非挥发性有机化合物,以获得有关个人健康状况的信息。这项工作旨在考虑呼吸乳酸测量在肿瘤诊断和治疗控制中的可能应用,讨论测量的技术障碍,并评估该技术未来改进的方向。呼气冷凝水(EBC)乳酸水平的使用在疾病以外的癌症也进行了简要的讨论。虽然使用EBC检测呼出气中的乳酸盐是一种很有前途的工具,可用于监测和筛查癌症,但检测的可靠性和灵敏度尚不确定,因此其在临床实践中的价值仍然有限。目前,血浆和EBC中存在的乳酸盐只能作为晚期癌症的生物标志物,因此目前其鉴别诊断的重要性有限,而具有预后价值。
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引用次数: 1
Predicting particle deposition using a simplified 8-path in silico human lung prototype. 使用简化的8路径在硅人肺原型中预测颗粒沉积。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-07-21 DOI: 10.1088/1752-7163/ace6c7
Raul Barrio Perotti, Noelia Martín-Fernández, Carmen Vigil-Díaz, Keith Walters, Ana Fernández-Tena

Understanding particle deposition in the human lung is crucial for the assessment of environmental pollutants and the design of new drug delivery systems. Traditionally, research has been carried out by experimental analysis, but this generally requires expensive equipment and exposure of volunteers to radiation, resulting in limited data. To overcome these drawbacks, there is an emphasis on the development of numerical models capable of accurate predictive analysis. The most advanced of these computer simulations are based on three-dimensional computational fluid dynamics. Solving the flow equations in a complete, fully resolved lung airway model is currently not feasible due to the computational resources required. In the present work, a simplified lung model is presented and validated for accurate prediction of particle deposition. Simulations are performed for an 8-path approximation to a full lung airway model. A novel boundary condition method is used to ensure accurate results in truncated flow branches. Simulations are performed at a steady inhalation flow rate of 18 l min-1, corresponding to a low activity breathing rate, while the effects of particle size and density are investigated. Comparison of the simulation results with available experimental data shows that reasonably accurate results can be obtained at a small fraction of the cost of a full airway model. The simulations clearly evaluate the effect of both particle size and particle density. Most importantly, the results show an improvement over a previously documented single-path model, both in terms of accuracy and the ability to obtain regional deposition rates. The present model represents an improvement over previously used simplified models, including single-path models. The multi-path reduced airway approach described can be used by researchers for general and patient-specific analyses of particle deposition and for the design of effective drug delivery systems.

了解颗粒在人类肺部的沉积对于评估环境污染物和设计新型药物输送系统至关重要。传统上,研究是通过实验分析进行的,但这通常需要昂贵的设备和志愿者暴露在辐射下,导致数据有限。为了克服这些缺点,重点是开发能够进行精确预测分析的数值模型。这些计算机模拟中最先进的是基于三维计算流体动力学。由于所需的计算资源,在完整、完全解析的肺气道模型中求解流动方程目前是不可行的。在本工作中,提出了一个简化的肺部模型,并对其进行了验证,以准确预测颗粒沉积。对全肺气道模型的8路径近似进行模拟。使用一种新的边界条件方法来确保截断流分支的精确结果。模拟是在18升min-1的稳定吸入流速下进行的,对应于低活动呼吸速率,同时研究颗粒大小和密度的影响。模拟结果与现有实验数据的比较表明,可以以全气道模型的一小部分成本获得相当准确的结果。模拟清楚地评估了颗粒大小和颗粒密度的影响。最重要的是,结果显示,在精度和获得区域沉积速率的能力方面,与之前记录的单路径模型相比,都有所改进。本模型表示对以前使用的简化模型(包括单路径模型)的改进。所描述的多路径减少气道方法可供研究人员用于颗粒沉积的一般和患者特异性分析以及有效药物递送系统的设计。
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引用次数: 0
Establishing a cell-based screening workflow for determining the efficiency of CYP2C9 metabolism: moving towards the use of breath volatiles in personalised medicine. 建立基于细胞的CYP2C9代谢效率筛选工作流程:朝着个性化医疗中使用呼吸挥发物的方向发展。
IF 3.8 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2023-07-19 DOI: 10.1088/1752-7163/ace46f
Franziska Lochmann, Aleksandar Nikolajevic, Valentina Stock, Sarah Kammerer, Monica L Fernández-Quintero, Johannes R Loeffler, Klaus R Liedl, Jakob Troppmair, Chris A Mayhew, Veronika Ruzsanyi

The use of volatile biomarkers in exhaled breath as predictors to individual drug response would advance the field of personalised medicine by providing direct information on enzyme activity. This would result in enormous benefits, both for patients and for the healthcare sector. Non-invasive breath tests would also gain a high acceptance by patients. Towards this goal, differences in metabolism resulting from extensive polymorphisms in a major group of drug-metabolizing enzymes, the cytochrome P450 (CYP) family, need to be determined and quantified. CYP2C9 is responsible for metabolising many crucial drugs (e.g., diclofenac) and food ingredients (e.g., limonene). In this paper, we provide a proof-of-concept study that illustrates thein vitrobioconversion of diclofenac in recombinant HEK293T cells overexpressing CYP2C9 to 4'-hydroxydiclofenac. Thisin vitroapproach is a necessary and important first step in the development of breath tests to determine and monitor metabolic processes in the human body. By focusing on the metabolic conversion of diclofenac, we have been able to establish a workflow using a cell-based system for CYP2C9 activity. Furthermore, we illustrate how the bioconversion of diclofenac is limited in the presence of limonene, which is another CYP2C9 metabolising substrate. We show that increasing limonene levels continuously reduce the production of 4'-hydroxydiclofenac. Michaelis-Menten kinetics were performed for the diclofenac 4'-hydroxylation with and without limonene, giving a kinetic constant of the reaction,KM, of 103µM and 94.1µM, respectively, and a maximum reaction rate,Vmax, of 46.8 pmol min-1106cells-1and 56.0 pmol min-1106cells-1with and without the inhibitor, respectively, suggesting a non-competitive or mixed inhibition type. The half-maximal inhibitory concentration value (IC50) for the inhibition of the formation of 4'-hydroxydiclofenace by limonene is determined to be 1413µM.

使用呼出气体中的挥发性生物标志物作为个体药物反应的预测因子,通过提供酶活性的直接信息,将推动个性化医疗领域的发展。这将为患者和医疗保健部门带来巨大的好处。无创呼吸测试也将获得患者的高度接受。为了实现这一目标,需要确定和量化细胞色素P450 (CYP)家族这一主要药物代谢酶群的广泛多态性所导致的代谢差异。CYP2C9负责代谢许多关键药物(如双氯芬酸)和食品成分(如柠檬烯)。在本文中,我们提供了一项概念验证研究,说明了双氯芬酸在过表达CYP2C9的重组HEK293T细胞中向4'-羟基双氯芬酸的体外生物转化。这种体外方法是发展呼吸测试以确定和监测人体代谢过程的必要和重要的第一步。通过关注双氯芬酸的代谢转化,我们已经能够使用基于细胞的CYP2C9活性系统建立一个工作流程。此外,我们说明了双氯芬酸的生物转化如何在柠檬烯存在下受到限制,柠檬烯是另一种CYP2C9代谢底物。我们表明,增加柠檬烯水平不断减少生产的4'-羟基双氯芬酸。采用Michaelis-Menten动力学对双氯芬酸4′-羟基化反应进行了研究,结果表明,在有和没有柠檬烯的情况下,反应的动力学常数KM分别为103µM和94.1µM,最大反应速率Vmax分别为46.8 pmol min-1106cells-1和56.0 pmol min-1106cells-1,表明双氯芬酸4′-羟基化反应为非竞争性或混合型抑制。柠檬烯抑制4′-羟基双氯芬醚生成的半最大抑制浓度值(IC50)为1413µM。
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Journal of breath research
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