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Method development: Assigning sex to African clawless otter spraints and assessing stability of faecal androgen and progestagen metabolites post-defaecation 方法开发:为非洲无爪水獭粪便指定性别并评估排便后粪便中雄性激素和孕激素代谢物的稳定性
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-06 DOI: 10.1016/j.mex.2024.102883

Monitoring reproductive physiology in wildlife can be a useful tool for assessing population dynamics for conservation and management purposes. Utilizing non-invasive approaches for this, such as quantifying reproductive hormone metabolites from faeces, can be challenging when defaecation events are not observed, or when cryptic species like African clawless otters (Aonyx capensis) are involved. Additionally, test systems for quantifying hormone metabolites in a species for the first time must first be reliably validated prior to use. Our results indicate that Epiandrosterone and Progesterone EIAs are most suitable for determining fAM and fPM concentrations in African clawless otter spraints. The fAM:fPM ratio and respective thresholds are more reliable in sex identification compared to the separate use of individual hormone classes. Sex-related hormone metabolite concentrations remained comparable for up to 12hrs post-defaecation in both sexes.

  • We screened two androgen and two progestagen enzyme-immunoassays (EIAs) for suitability and reliable quantification of faecal androgen metabolites (fAM) and faecal progestagen metabolites (fPM) in African clawless otters.

  • We assessed whether the ratio of fAM:fPM concentrations can be used to assign sex to faecal samples from unknown individuals.

  • We tested the stability of fAM and fPM concentrations post-defaecation to determine the effects of environmental exposure and bacterial metabolism.

为保护和管理目的,监测野生动物的生殖生理是评估种群动态的有用工具。利用非侵入性方法(如从粪便中定量检测生殖激素代谢物)进行监测,在未观察到排便事件或涉及非洲无爪水獭(Aonyx capensis)等隐蔽物种时可能具有挑战性。此外,首次对某一物种的激素代谢物进行定量的测试系统在使用前必须首先经过可靠的验证。我们的研究结果表明,表雄酮和孕酮 EIA 最适合用于测定非洲无爪水獭扭伤处的 fAM 和 fPM 浓度。与单独使用单个激素类相比,fAM:fPM 比率和各自的阈值在性别鉴定中更为可靠。我们筛选了两种雄性激素和两种孕激素酶免疫分析法(EIA),以确定其是否适用于非洲无爪水獭粪便雄性激素代谢物(fAM)和粪便孕激素代谢物(fPM)的可靠定量。-我们测试了排便后 fAM 和 fPM 浓度的稳定性,以确定环境暴露和细菌代谢的影响。
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引用次数: 0
New hybrid EC-PROMETHEE method with multiple iterations of random weight ranges: Step-by-step application in Python 采用随机权重范围多次迭代的新型混合 EC-PROMETHEE 方法:Python 中的逐步应用
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-05 DOI: 10.1016/j.mex.2024.102890

The decision-making process consists of finding the best solution to an analyzed problem. This search is carried out in the face of countless interactions when analyzing an alternative criterion by criterion, under which weights are assigned that distinguish the degree of importance they have for the decision-makers. The definition of weight for each criterion gives rise to three lines of thought on the subject. There are objective, subjective, and hybrid methods. This discussion concerns the degree to which experts define the criteria weights. Based on this discussion, we developed a hybrid method to integrate the Entropy and CRITIC methods with the PROMETHEE method, called EC-PROMETHEE. The innovation of this method is that the combination of the Entropy and CRITIC methods does not result in a single set of weights. In reality, the weights generated by each method are used to define each criterion's upper and lower limits. The range of weights generated for each criterion is emulated "n" times and builds a set of weights that are applied to the ranking definition process. The model generates "n" rankings, defining a single ranking. In this article, we demonstrate a step-by-step application of a tool developed in Python called EC-PROMETHEE and use it as an example of the problem of choosing rotary-wing airplanes for application in the military police service.

  • The method reduces discretion in determining the weights of the criteria;

  • The innovation lies in the use of a range of weights for criteria;

  • Consistency in defining the final ranking.

决策过程包括为所分析的问题找到最佳解决方案。在逐个标准分析备选方案时,要面对无数的相互作用,在此基础上分配权重,以区分这些标准对决策者的重要程度。对每条标准的权重进行定义时,会产生三种思路。有客观法、主观法和混合法。本讨论涉及专家定义标准权重的程度。基于这一讨论,我们开发了一种混合方法,将熵法和 CRITIC 法与 PROMETHEE 法结合起来,称为 EC-PROMETHEE。这种方法的创新之处在于,熵法和 CRITIC 法的结合不会产生单一的权重集。实际上,每种方法产生的权重都用来定义每个标准的上限和下限。为每个标准生成的权重范围会被模拟 "n "次,并建立一组权重,应用于排序定义过程。该模型会生成 "n "个排名,并定义一个排名。在本文中,我们逐步演示了使用 Python 开发的工具 EC-PROMETHEE 的应用,并以选择旋翼机应用于武警部队的问题为例进行了说明➢该方法减少了确定标准权重时的自由裁量权;➢创新之处在于使用了标准权重范围;➢在定义最终排名时保持了一致性。
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引用次数: 0
Valorization of fishery industry waste: Chitosan extraction and its application in the industry 渔业废弃物的价值评估:壳聚糖提取及其在工业中的应用
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-05 DOI: 10.1016/j.mex.2024.102892

Waste from the fishing industry is disposed of in soils and oceans, causing environmental damage. However, it is also a source of valuable compounds such as chitin. Although chitin is the second most abundant polymer in nature, its use in industry is limited due to the lack of standardized and scalable extraction methods and its poor solubility. The deacetylation process increases its potential applications by enabling the recovery of chitosan, which is soluble in dilute acidic solutions. Chitosan is a polymer of great importance due to its biocompatible and bioactive properties, which include antimicrobial and antioxidant capabilities. Chitin extraction and its deacetylation to obtain chitosan are typically performed using chemical processes that involve large amounts of strongly acidic and alkaline solutions. To reduce the environmental impact of this process, extraction methods based on biotechnological tools, such as fermentation and chitin deacetylase, as well as emerging technologies, have been proposed. These extraction methods have demonstrated the potential to reduce or even avoid using strong solvents and shorten extraction time, thereby reducing costs.

Nevertheless, it is important to address existing gaps in this area, such as the requirements for large-scale implementation and the determination of the stoichiometric ratios for each process. This review highlights the use of biotechnological tools and emerging technologies for chitin extraction and chitosan production. These approaches truly minimize environmental impact, reduce the use of strong solvents, and shorten extraction time. They are a reliable alternative to fishery waste valorization, lowering costs; however, addressing the critical gaps for their large-scale implementation remains challenging.

渔业产生的废物被丢弃在土壤和海洋中,对环境造成破坏。然而,它也是甲壳素等有价值化合物的来源。虽然甲壳素是自然界中含量第二高的聚合物,但由于缺乏标准化和可扩展的提取方法,而且其溶解性较差,因此在工业中的应用十分有限。脱乙酰化工艺可回收甲壳素,从而增加其潜在的应用领域,因为甲壳素可溶于稀酸性溶液。壳聚糖是一种非常重要的聚合物,具有生物相容性和生物活性,包括抗菌和抗氧化能力。提取甲壳素和脱乙酰基以获得壳聚糖通常采用化学工艺,其中涉及大量强酸性和强碱性溶液。为了减少这一过程对环境的影响,人们提出了基于生物技术手段(如发酵和甲壳素脱乙酰酶)以及新兴技术的提取方法。这些萃取方法已证明有可能减少甚至避免使用强溶剂,并缩短萃取时间,从而降低成本。然而,重要的是要解决该领域的现有差距,如大规模实施的要求和确定每种工艺的化学计量比。本综述重点介绍了利用生物技术工具和新兴技术提取甲壳素和生产壳聚糖的情况。这些方法真正将环境影响降至最低,减少了强溶剂的使用,并缩短了提取时间。它们是渔业废弃物价值化的可靠替代方法,可降低成本;然而,解决大规模实施过程中的关键差距仍具有挑战性。
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引用次数: 0
Method for computer tomography voxel-based finite element analysis and validation with digital image correlation system 基于体素的计算机断层扫描有限元分析方法和数字图像相关系统验证
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-03 DOI: 10.1016/j.mex.2024.102879

Understanding the mechanical behavior of heterogeneous materials is becoming increasingly crucial across various fields, including aerospace engineering, composite materials development, geology, and biomechanics. While substantial literature exists on this topic, conventional methods often rely on commercial software packages. This study presents a framework for computed tomography (CT) scan-based finite element (FE) analysis of such materials using open-source software in most of the workflow.

Our work focuses on three key aspects:

  • 1.

    Mesh generation that incorporates spatially varying mechanical properties and well-defined boundary conditions.

  • 2.

    Validation of the FE results through comparison with digital image correlation (DIC) system measurements.

  • 3.

    Open-source software utilization throughout the entire process, making it more accessible and cost-effective.

This work aims to demonstrate the effectiveness of this framework for analyzing heterogeneous materials in various fields, offering a more accessible and affordable approach.
在航空航天工程、复合材料开发、地质学和生物力学等各个领域,了解异质材料的力学行为正变得越来越重要。虽然已有大量相关文献,但传统方法通常依赖于商业软件包。本研究提出了一个基于计算机断层扫描(CT)的有限元(FE)分析框架,在大部分工作流程中使用开源软件。我们的工作主要集中在三个关键方面:1.结合空间变化的机械属性和定义明确的边界条件生成网格。2. 通过与数字图像相关(DIC)系统的测量结果进行比较,验证 FE 结果。 3. 在整个过程中使用开源软件,使其更易于使用且更具成本效益。
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引用次数: 0
A pycnometric method to estimate the porosity of hydrophobic hollow fiber membranes 估算疏水中空纤维膜孔隙率的 pycnometric 方法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-02 DOI: 10.1016/j.mex.2024.102882

The porosity of hollow fiber membranes is an important property in the design of processes implementing membrane contactors as it is directly related to the effective surface available for mass transfer. Nevertheless, measuring the porosity requires most of the time complex experimental setup and some of the existing methods are questionable when applied to polymeric membrane materials. In this work, we adapted a method originally proposed to estimate the porosity of flat membranes, in order to estimate the porosity of hollow fiber membranes.

  • Some hydrophobic hollow fibers are put in contact with a non-wetting solvent inside a pycnometer. The mass of the system is measured.

  • The process is repeated using a wetting solvent.

  • The porosity is deduced from the difference between the weighing data.

中空纤维膜的孔隙率是设计膜接触器过程中的一个重要特性,因为它与可用于传质的有效表面直接相关。然而,测量孔隙率大多需要复杂的实验装置,而且一些现有方法在应用于聚合物膜材料时存在问题。在这项工作中,我们采用了一种最初为估算平膜孔隙率而提出的方法,以估算中空纤维膜的孔隙率。测量系统的质量,使用润湿溶剂重复该过程,根据称重数据之间的差值推断孔隙率。
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引用次数: 0
Comparative assessment of three commercial kits and in house optimized PCR assays for GMO screening in food and feed 对用于食品和饲料中转基因生物筛选的三种商业试剂盒和内部优化的 PCR 检测方法进行比较评估。
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-07-26 DOI: 10.1016/j.mex.2024.102878

Screening strategies for GMO detection in food and feed are a crucial aspect in GMO testing laboratories for streamlining the analytical workflow and reducing turnaround time and costs. These strategies can be more or less complex or even be targeted according to the ingredients in the product, but whatever the choice, a good basic approach is generally based on the search for 35S promoter (P35S), nos-terminator (T-nos) and FMV promoter (P-FMV). In this study, we compare the singleplex real time PCR method for P35S, T-nos and P-FMV detection currently adopted by the Italian National Reference Laboratory for GM food and feed (NRL) with three commercial kits available on the market for giving a greater choice to consider the best approach suitable to the official control laboratories that are different from each other.

  • The NRL optimized singleplex PCR methods and the three commercial kits fully respect all the validation parameters criteria according to the minimum performance requirements (MPR) of ENGL [1]

  • Screening strategies for GMO detection in food and feed are a crucial aspect in GMO testing laboratories and being the commercial kits different from each other, the laboratory can choose the methods best suit their needs reducing turnaround time and costs.

食品和饲料中转基因生物检测的筛选策略是转基因生物检测实验室简化分析工作流程、减少周转时间和成本的关键环节。这些策略可能或多或少比较复杂,甚至可以根据产品中的成分进行有针对性的选择,但无论如何选择,一个好的基本方法一般都是基于寻找 35S 启动子(P35S)、nos-终止子(T-nos)和 FMV 启动子(P-FMV)。在这项研究中,我们将意大利转基因食品和饲料国家参考实验室(NRL)目前采用的检测 P35S、T-nos 和 P-FMV 的单复式实时 PCR 方法与市场上的三种商业试剂盒进行了比较,以便为官方控制实验室提供更多的选择,考虑适合它们的最佳方法。-NRL 优化的单复式 PCR 方法和三种商用试剂盒完全符合 ENGL 最低性能要求 (MPR) 规定的所有验证参数标准[1]。
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引用次数: 0
Modern methods of neuroanatomical and neurophysiological research 现代神经解剖学和神经生理学研究方法。
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-07-26 DOI: 10.1016/j.mex.2024.102881

Our article explores a variety of modern research techniques employed in neuroanatomy and neurophysiology. We highlight the use of computer technologies, image analysis methods, and innovative approaches that expand our understanding of anatomical structures. The techniques we discuss include fractal analysis, the Pickworth method, scanning microscopy, and advanced computer image processing systems. Fractal analysis, in particular, offers a unique perspective on brain structures and functions and is a key tool in neuroanatomical research. We also focus on its application in neuroanatomical studies, particularly in cases of Alzheimer's disease and epilepsy.

These modern research methods not only enhance our knowledge but also have significant clinical potential. Their use in diagnosing neurological diseases like Alzheimer's and epilepsy promises faster and more accurate diagnoses. We emphasize the combination of multiple methods for improved quality of anatomical structure imaging.

我们的文章探讨了神经解剖学和神经生理学中采用的各种现代研究技术。我们重点介绍了计算机技术、图像分析方法和创新方法的使用,这些技术和方法拓展了我们对解剖结构的理解。我们讨论的技术包括分形分析、皮克沃斯方法、扫描显微镜和先进的计算机图像处理系统。尤其是分形分析,它为我们提供了一个了解大脑结构和功能的独特视角,是神经解剖学研究的重要工具。我们还重点关注其在神经解剖学研究中的应用,尤其是在阿尔茨海默病和癫痫病例中的应用。这些现代研究方法不仅增进了我们的知识,还具有巨大的临床潜力。在诊断阿尔茨海默病和癫痫等神经系统疾病时,使用这些方法有望获得更快、更准确的诊断。我们强调多种方法的结合,以提高解剖结构成像的质量。
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引用次数: 0
A method to promote safe cycling powered by large language models and AI agents 利用大型语言模型和人工智能代理促进安全骑行的方法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-07-26 DOI: 10.1016/j.mex.2024.102880

This paper presents a novel information generation methodology to support safer cycling patterns in urban environments, leveraging for that Large Language Models (LLMs), AI-based agents, and open geospatial data. By processing multiple files containing previously computed urban risk levels and existing mobility infrastructure, which are generated by exploiting open data sources, our method exploits multi-layer data preprocessing procedures and prompt engineering to create easy-to-use, user-friendly assistive systems that are able to provide useful information concerning cycling safety. Through a well-defined processing pipeline based on Data Ingestion and Preparation, Agents Orchestration, and Decision Execution methodological steps, our method shows how to integrate open-source tools and datasets, ensuring reproducibility and accessibility for urban planners and cyclists. Moreover, an AI agent is also provided, which fully implements our method and acts as a proof-of-concept implementation. This paper demonstrates the effectiveness of our method in enhancing cycling safety and urban mobility planning.

  • A novel method that combines LLMs and AI agents is defined to enhance the processing of multi-domain open geospatial data, potentially promoting cycling safety.

  • It integrates urban risk data and cycling infrastructure for a more comprehensive understanding of cycling resources, which become accessible by textual or audio prompts.

本文介绍了一种新颖的信息生成方法,利用大型语言模型(LLM)、人工智能代理和开放地理空间数据,支持城市环境中更安全的骑行模式。我们的方法利用多层数据预处理程序和提示工程,通过处理包含先前计算的城市风险水平和现有流动性基础设施的多个文件,创建了易于使用、用户友好的辅助系统,能够提供有关骑行安全的有用信息。通过基于数据输入和准备、代理协调和决策执行方法步骤的定义明确的处理管道,我们的方法展示了如何整合开源工具和数据集,确保城市规划者和骑车人的可重复性和可访问性。此外,本文还提供了一个人工智能代理,该代理完全实现了我们的方法,并作为概念验证实现。本文证明了我们的方法在加强自行车安全和城市交通规划方面的有效性。本文定义了一种结合 LLM 和人工智能代理的新方法,以加强对多领域开放地理空间数据的处理,从而促进自行车安全。
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引用次数: 0
The Australian Park Life project: Development of a nationally standardised spatial layer and public participatory GIS for greenspace in Australian capital cities 澳大利亚公园生活项目:为澳大利亚首府城市的绿地开发全国标准化空间层和公众参与式地理信息系统
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-07-25 DOI: 10.1016/j.mex.2024.102856

This paper introduces the ‘Australian Park Life Project’ and describes a protocol to standardise the capture and collation of public open greenspace spatial data across Australian cities. This method will progress greenspace research allowing for unique coherent national analyses and comparative research across Australia. We also outline the development of the Park Life public participatory geographic information system (PPGIS) to spatially explore what, and how, public open greenspaces are being used by Australian communities. The combination of community crowdsourced spatial data providing location-specific information on the green public open spaces used, in combination with the national spatial layer of greenspace allows for unique analyses exploring the role of greenspace provision and design on use and represents a transformative strategy in shaping public open space policy and strategy.

  • A spatial layer of public open greenspace was created for the eight Australian State and Territory capital cities using a standardised data capture and collection method from local government planning schemes and land use data, and listings of managed and demarcated parks and reserves.

  • The Park Life public participatory geographic information system (PPGIS) was built to capture spatially referenced information on the use of greenspaces - specifically what spaces are used, and how they are used.

本文介绍了 "澳大利亚公园生活项目",并描述了澳大利亚各城市公共开放绿地空间数据的标准化采集和整理协议。这种方法将推动绿地研究的发展,从而在澳大利亚全国范围内开展独特的连贯分析和比较研究。我们还概述了 "公园生活 "公众参与式地理信息系统(PPGIS)的开发情况,该系统旨在从空间上探索澳大利亚社区正在使用哪些以及如何使用公共开放绿地。社区众包空间数据提供了所使用的绿色公共开放空间的具体位置信息,结合全国绿地空间层,可以进行独特的分析,探索绿地供应和设计对使用的作用,是制定公共开放空间政策和战略的变革性战略。-公园生活 "公众参与式地理信息系统(PPGIS)的建立是为了获取有关绿地使用情况的空间参考信息--特别是使用了哪些绿地以及如何使用这些绿地。
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引用次数: 0
Corrigendum to “Improved STNNet, A benchmark for detection, tracking, and counting crowds using Drones” [MethodsX 13 (2024) 1-7/102820] 改进的 STNNet,使用无人机检测、跟踪和计算人群的基准》[MethodsX 13 (2024) 1-7/102820] 勘误表
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-07-25 DOI: 10.1016/j.mex.2024.102870
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引用次数: 0
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