Gibberellic acid (GA3) is a crucial phytohormone involved in plant growth regulation with widespread applications in agriculture and other fields. In this study, GA3 synthesis in an industrial GA3 producer F. fujikuroi strain FF00 was improved with a strategy by reprogramming the regulatory network and overexpressing key genes. Three positive regulators AreA (the nitrogen regulator), Lae1 (the velvet complex component), and Hat1 (the histone modification regulator) were identified by screening regulators affecting GA3 biosynthesis. Mutant FF18–4 with GA3 titer of 2.61 g/L in shake-flask fermentation was constructed by co-overexpressing AreA, Lae1, and Hat1 in strain FF00. Comparative transcriptomic analysis revealed that reprogramming of the regulatory network resulted in the down-regulation of two key genes (Ggs2 and Cps/Ks) in the GA3 biosynthetic pathway which reduced the supply of GA3 precursor geranylgeranyl pyrophosphate. Ggs2 and Cps/Ks genes were further co-overexpressed to enhance metabolic flux for GA3 biosynthesis. The GA3 titer of the resulting mutant FF19–5 reached 2.73 g/L, which was 49.2 % higher than that of strain FF00. Therefore, the GA3 biosynthesis of strain FF00 was significantly improved by metabolic network reprogramming and metabolic balance. The established strategy provided the basis for GA3 over-producer construction and may be helpful for the synthesis of other chemicals with microbial cell factories.
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