Pub Date : 2025-11-03Epub Date: 2025-09-29DOI: 10.1016/j.molp.2025.09.016
Shengdie Yang, T Martijn Bezemer, Xiaohang Yuan, Xiaoyu Liu, Ting Wan, Feihong Liu, Tao Wen, Qirong Shen, Jun Yuan
Plants can cope with stresses via the "cry-for-help" strategy, but how aboveground insect herbivores induce alterations in the rhizosphere microbiota through eliciting this plant-driven response remains unexplored. In this study, we exposed cabbage plants to aboveground insect herbivory for five sequential planting rounds in the same soil. New cabbage plants, growing in the soils conditioned for five rounds, showed a significant increase in resistance to aboveground insect herbivory. Analyses of microbial communities in the rhizosphere of cabbage plants revealed that this effect was attributed to the accumulation of Pseudomonas in herbivore-conditioned soils. Rhizophere metabolic profiling further identified that some amino acids were present at higher concentrations in the rhizosphere of cabbage plants suffering from insect herbivory. Beneficial Pseudomonas species could be enriched by applying these amino acids. Notably, cabbage plants exhibited the highest resistance to insect herbivory following the application of a synbiotic, a combination of amino acids (prebiotics) and Pseudomonas spp. (probiotics). Moreover, we showed that Pseudomonas activates the jasmonate signaling pathway in the plant, which occurred in salicylic acid-deficient, but not in jasmonic acid-deficient, Arabidopsis thaliana mutants and led to the induction of glucosinolate-based defenses against insect herbivory. Collectively, this work reveals a belowground cry-for-help response in plants induced by aboveground herbivory, enabling the development of a novel synbiotic for plant health maintenance.
{"title":"Design of effective synbiotics against aboveground insect herbivory through characterization of host plant rhizosphere microbiota and metabolites.","authors":"Shengdie Yang, T Martijn Bezemer, Xiaohang Yuan, Xiaoyu Liu, Ting Wan, Feihong Liu, Tao Wen, Qirong Shen, Jun Yuan","doi":"10.1016/j.molp.2025.09.016","DOIUrl":"10.1016/j.molp.2025.09.016","url":null,"abstract":"<p><p>Plants can cope with stresses via the \"cry-for-help\" strategy, but how aboveground insect herbivores induce alterations in the rhizosphere microbiota through eliciting this plant-driven response remains unexplored. In this study, we exposed cabbage plants to aboveground insect herbivory for five sequential planting rounds in the same soil. New cabbage plants, growing in the soils conditioned for five rounds, showed a significant increase in resistance to aboveground insect herbivory. Analyses of microbial communities in the rhizosphere of cabbage plants revealed that this effect was attributed to the accumulation of Pseudomonas in herbivore-conditioned soils. Rhizophere metabolic profiling further identified that some amino acids were present at higher concentrations in the rhizosphere of cabbage plants suffering from insect herbivory. Beneficial Pseudomonas species could be enriched by applying these amino acids. Notably, cabbage plants exhibited the highest resistance to insect herbivory following the application of a synbiotic, a combination of amino acids (prebiotics) and Pseudomonas spp. (probiotics). Moreover, we showed that Pseudomonas activates the jasmonate signaling pathway in the plant, which occurred in salicylic acid-deficient, but not in jasmonic acid-deficient, Arabidopsis thaliana mutants and led to the induction of glucosinolate-based defenses against insect herbivory. Collectively, this work reveals a belowground cry-for-help response in plants induced by aboveground herbivory, enabling the development of a novel synbiotic for plant health maintenance.</p>","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"1901-1919"},"PeriodicalIF":24.1,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145200401","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-03Epub Date: 2025-10-01DOI: 10.1016/j.molp.2025.09.021
Qia Wang, Ye Ye, Lulu Wang, Yanlong Guan, Shuanghua Wang, Zhe Wang, Hang Sun, Steven M Smith, Jinling Huang
Strigolactones (SLs) are not only phytohormones that influence multiple aspects of plant growth and development but also signaling molecules for interactions between plants and certain fungi or bacteria. In plants, the SL receptor is an α/β-hydrolase (ABH) encoded by the DWARF14 (D14)/KARRIKIN INSENSITIVE2 (KAI2) gene family, which is known to be derived from proteobacterial RsbQ through horizontal gene transfer (HGT). In the phytopathogenic fungus Cryphonectria parasitica, another ABH named CpD14 was found to possess SL binding and hydrolytic activities and mediate SL responses, exhibiting potential SL perception functions. Here, we demonstrate that CpD14 and its homologs in Leotiomyceta fungi were derived from Actinobacteria through an independent HGT event, forming a distinct CpD14-like (CDL) family across fungi and bacteria. X-ray crystallography and structural analyses reveal that actinobacterial and fungal CDL proteins share a conserved core "α/β fold" domain with D14/KAI2/RsbQ but possess a unique lid domain. Biochemical assays show that both actinobacterial CDL and proteobacterial RsbQ can recognize and hydrolyze SLs, suggesting that they are pre-adapted for SL responses and potential perception. Both plant D14/KAI2 and fungal CDL proteins retained these functional activities, whereas they evolved distinct ligand specificities for SL structural variants. Collectively, this work reveals that independent HGT events from two bacterial groups provided plants and their interacting fungi with pre-adapted ABH proteins, which were deployed for SL perception or responses.
{"title":"Independent horizontal transfer of genes encoding α/β-hydrolases with strigolactone binding and hydrolytic activities from bacteria to fungi and plants.","authors":"Qia Wang, Ye Ye, Lulu Wang, Yanlong Guan, Shuanghua Wang, Zhe Wang, Hang Sun, Steven M Smith, Jinling Huang","doi":"10.1016/j.molp.2025.09.021","DOIUrl":"10.1016/j.molp.2025.09.021","url":null,"abstract":"<p><p>Strigolactones (SLs) are not only phytohormones that influence multiple aspects of plant growth and development but also signaling molecules for interactions between plants and certain fungi or bacteria. In plants, the SL receptor is an α/β-hydrolase (ABH) encoded by the DWARF14 (D14)/KARRIKIN INSENSITIVE2 (KAI2) gene family, which is known to be derived from proteobacterial RsbQ through horizontal gene transfer (HGT). In the phytopathogenic fungus Cryphonectria parasitica, another ABH named CpD14 was found to possess SL binding and hydrolytic activities and mediate SL responses, exhibiting potential SL perception functions. Here, we demonstrate that CpD14 and its homologs in Leotiomyceta fungi were derived from Actinobacteria through an independent HGT event, forming a distinct CpD14-like (CDL) family across fungi and bacteria. X-ray crystallography and structural analyses reveal that actinobacterial and fungal CDL proteins share a conserved core \"α/β fold\" domain with D14/KAI2/RsbQ but possess a unique lid domain. Biochemical assays show that both actinobacterial CDL and proteobacterial RsbQ can recognize and hydrolyze SLs, suggesting that they are pre-adapted for SL responses and potential perception. Both plant D14/KAI2 and fungal CDL proteins retained these functional activities, whereas they evolved distinct ligand specificities for SL structural variants. Collectively, this work reveals that independent HGT events from two bacterial groups provided plants and their interacting fungi with pre-adapted ABH proteins, which were deployed for SL perception or responses.</p>","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"1949-1961"},"PeriodicalIF":24.1,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145213201","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Plants have developed a multi-layered immune system to cope with pathogens. The receptors on the plasma membrane are controlled by endocytosis to modulate immune signaling, but the regulatory mechanisms of endocytosis in this process remain largely unclear. Here, we uncover that reversible S-acylation of BONZAI1 (BON1), a conserved copine-family protein that regulates development-immunity balance in Arabidopsis, contributes to the accurate control of endocytosis. BON1 is targeted by S-acylation, a type of protein lipidation, for its localization on the plasma membrane and its function in development and immunity. Furthermore, the S-acylation status of BON1 affects its association with the light-chain clathrin subunit CLC3 and regulates endocytosis. Specifically, PAT14 facilitates the S-acylation of BON1, while ABAPT11 mediates its de-S-acylation. Physiological levels of reversible S-acylation of BON1 are essential for endocytosis and the internalization of immune receptors. Interestingly, salicylic acid enhances ABAPT11-dependent de-S-acylation of BON1 to amplify immune signaling. Collectively, our study reveals that reversible S-acylation of BON1 precisely regulates immune receptor internalization for balancing plant development and immunity, providing potential targets that may be used to improve crop yields and disease resistance.
{"title":"Reversible S-acylation of BONZAI1 orchestrates the internalization of immune receptors to balance plant development and immunity.","authors":"Xiaoshi Liu, Zhiying Wang, Shihui Li, Panpan Li, Meiqi Yuan, Xiaolin Lu, Chi Li, Yuewen Zheng, Zhendan Cao, Chuanliang Liu, Hongbo Li, Chao Wang, Caiji Gao, Chengwei Yang, Jianbin Lai","doi":"10.1016/j.molp.2025.10.006","DOIUrl":"10.1016/j.molp.2025.10.006","url":null,"abstract":"<p><p>Plants have developed a multi-layered immune system to cope with pathogens. The receptors on the plasma membrane are controlled by endocytosis to modulate immune signaling, but the regulatory mechanisms of endocytosis in this process remain largely unclear. Here, we uncover that reversible S-acylation of BONZAI1 (BON1), a conserved copine-family protein that regulates development-immunity balance in Arabidopsis, contributes to the accurate control of endocytosis. BON1 is targeted by S-acylation, a type of protein lipidation, for its localization on the plasma membrane and its function in development and immunity. Furthermore, the S-acylation status of BON1 affects its association with the light-chain clathrin subunit CLC3 and regulates endocytosis. Specifically, PAT14 facilitates the S-acylation of BON1, while ABAPT11 mediates its de-S-acylation. Physiological levels of reversible S-acylation of BON1 are essential for endocytosis and the internalization of immune receptors. Interestingly, salicylic acid enhances ABAPT11-dependent de-S-acylation of BON1 to amplify immune signaling. Collectively, our study reveals that reversible S-acylation of BON1 precisely regulates immune receptor internalization for balancing plant development and immunity, providing potential targets that may be used to improve crop yields and disease resistance.</p>","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"1932-1948"},"PeriodicalIF":24.1,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145275391","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-03Epub Date: 2025-09-10DOI: 10.1016/j.molp.2025.09.005
Chuan Tang, Chunmeng Wang, Zhenwei Zhang, Yilan Cao, Mustafa Bulut, Yingjie Xiao, Xiaoyun Li, Tao Xiong, Jianbing Yan, Tingting Guo
This study introduces multi-dimensional environment (MDE) zoning to enhance maize resilience and improve stagnant yields in China amid climate change. Utilizing comprehensive environmental and yield data, MDE zoning accurately identifies areas for targeted, climate-adaptive breeding. The tool provides a flexible framework for updates using annual variety testing and daily environmental data, optimizing maize production and resource allocation.
{"title":"Redefining agroecological zones in China to mitigate climate change impacts on maize production.","authors":"Chuan Tang, Chunmeng Wang, Zhenwei Zhang, Yilan Cao, Mustafa Bulut, Yingjie Xiao, Xiaoyun Li, Tao Xiong, Jianbing Yan, Tingting Guo","doi":"10.1016/j.molp.2025.09.005","DOIUrl":"10.1016/j.molp.2025.09.005","url":null,"abstract":"<p><p>This study introduces multi-dimensional environment (MDE) zoning to enhance maize resilience and improve stagnant yields in China amid climate change. Utilizing comprehensive environmental and yield data, MDE zoning accurately identifies areas for targeted, climate-adaptive breeding. The tool provides a flexible framework for updates using annual variety testing and daily environmental data, optimizing maize production and resource allocation.</p>","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"1799-1802"},"PeriodicalIF":24.1,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145033777","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-03Epub Date: 2025-09-15DOI: 10.1016/j.molp.2025.09.013
Weiqin Zhang, Wuyu Liu, Kai Wang, Huaping Cheng, Xiaoli Bai, Jianhua Zhang, Gehong Wei, Juan Chen
Reactive oxygen species play a crucial role in various stages of the legume-rhizobia symbiosis, from initial nodulation signaling to nodule senescence. However, how rhizobial redox-related proteins regulate symbiotic nodulation in legumes remains largely unknown. By combining transcriptomics, proteomics, and biochemical and molecular genetics, we investigated the role of the Sinorhizobium fredii Q8 enzyme 3-mercaptopyruvate sulfurtransferase (3MST). Although 3MST was not the primary enzyme responsible for hydrogen sulfide (H2S) production under our conditions, its absence significantly impaired symbiotic nodule development, redox homeostasis, infection capacity, and nitrogen-fixation efficiency in soybean. We identified a host plasma membrane-localized NADPH oxidase, respiratory burst oxidase homolog B (RbohB), as a key regulator of immune activation during nodule development. Notably, 3MST was secreted during nodulation and localized in the nucleoid and cytoplasmic membrane, where it interacts with and persulfidates RbohB at Cys791, thereby suppressing the NADPH oxidase activity of RbohB. We observed that 3MST-mediated persulfidation of RbohB maintains symbiotic redox balance and promotes nodule development. Genetic analyses in soybean, including RbohB overexpression, RNA interference, and site-directed mutagenesis at Cys791, further supported this observation, linking the 3MST-RbohB interaction to effective rhizobial colonization and improved plant growth. Taken together, these findings uncover a rhizobia-initiated symbiotic regulatory mechanism by which a rhizobial sulfurtransferase modulates soybean RbohB via persulfidation to limit NADPH oxidase activity and promote nodulation.
{"title":"Persulfidation of host NADPH oxidase RbohB by rhizobial 3-mercaptopyruvate sulfurtransferase maintains redox homeostasis and promotes symbiotic nodulation in soybean.","authors":"Weiqin Zhang, Wuyu Liu, Kai Wang, Huaping Cheng, Xiaoli Bai, Jianhua Zhang, Gehong Wei, Juan Chen","doi":"10.1016/j.molp.2025.09.013","DOIUrl":"10.1016/j.molp.2025.09.013","url":null,"abstract":"<p><p>Reactive oxygen species play a crucial role in various stages of the legume-rhizobia symbiosis, from initial nodulation signaling to nodule senescence. However, how rhizobial redox-related proteins regulate symbiotic nodulation in legumes remains largely unknown. By combining transcriptomics, proteomics, and biochemical and molecular genetics, we investigated the role of the Sinorhizobium fredii Q8 enzyme 3-mercaptopyruvate sulfurtransferase (3MST). Although 3MST was not the primary enzyme responsible for hydrogen sulfide (H<sub>2</sub>S) production under our conditions, its absence significantly impaired symbiotic nodule development, redox homeostasis, infection capacity, and nitrogen-fixation efficiency in soybean. We identified a host plasma membrane-localized NADPH oxidase, respiratory burst oxidase homolog B (RbohB), as a key regulator of immune activation during nodule development. Notably, 3MST was secreted during nodulation and localized in the nucleoid and cytoplasmic membrane, where it interacts with and persulfidates RbohB at Cys791, thereby suppressing the NADPH oxidase activity of RbohB. We observed that 3MST-mediated persulfidation of RbohB maintains symbiotic redox balance and promotes nodule development. Genetic analyses in soybean, including RbohB overexpression, RNA interference, and site-directed mutagenesis at Cys791, further supported this observation, linking the 3MST-RbohB interaction to effective rhizobial colonization and improved plant growth. Taken together, these findings uncover a rhizobia-initiated symbiotic regulatory mechanism by which a rhizobial sulfurtransferase modulates soybean RbohB via persulfidation to limit NADPH oxidase activity and promote nodulation.</p>","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"1843-1863"},"PeriodicalIF":24.1,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145075759","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Plant architecture is a critical agronomic trait directly affecting planting density and crop yield. Phosphate (Pi) starvation in rice (Oryza sativa) leads to a significant reduction in tiller number and a more upright leaf angle. Insensitivity to brassinosteroid (BR) signaling can lead to similar phenotypes. However, the molecular mechanisms underlying how Pi affects plant architecture through brassinosteroid signaling remain obscure. In this study, we demonstrate that the Pi starvation-induced E3 ligase OsPUB77 regulates rice shoot architecture by affecting leaf angle and tiller number. We further revealed that the Pi-signaling-related transcription factor RLI1a releases its repression of the expression of OsPUB77 under Pi deficiency. Subsequently, the accumulated OsPUB77 influences shoot architecture by ubiquitinating OsBZR3 to inhibit BR signaling. Furthermore, we found that natural variation in two single-nucleotide polymorphisms within the OsPUB77 U-box domain coding OsPUB77R530 results in higher ubiquitin transfer activity than OsPUB77I530 due to a stronger interaction with E2. Introducing the OsPUB77pro::OsPUB77R530I transgene into the ospub77-1 background confirmed that OsPUB77R530 results in more upright leaves. Collectively, our work identifies an RLI1a-OsPUB77-OsBZR3 module that mediates the crosstalk between Pi and BR signaling to shape shoot architecture in response to Pi starvation in rice.
{"title":"The RLI1-OsPUB77-OsBZR3 module mediates the crosstalk between phosphate starvation and brassinosteroid signaling pathways to shape rice shoot architecture.","authors":"Kai Wang, Peng Yan, Jiangfan Guo, Wei Li, Shichen Zhou, Yijian Liu, Jiming Xu, Yu Liu, Yunrong Wu, Zhongchang Wu, Peng Wang, Chuanzao Mao, Xiaorong Mo","doi":"10.1016/j.molp.2025.09.019","DOIUrl":"10.1016/j.molp.2025.09.019","url":null,"abstract":"<p><p>Plant architecture is a critical agronomic trait directly affecting planting density and crop yield. Phosphate (Pi) starvation in rice (Oryza sativa) leads to a significant reduction in tiller number and a more upright leaf angle. Insensitivity to brassinosteroid (BR) signaling can lead to similar phenotypes. However, the molecular mechanisms underlying how Pi affects plant architecture through brassinosteroid signaling remain obscure. In this study, we demonstrate that the Pi starvation-induced E3 ligase OsPUB77 regulates rice shoot architecture by affecting leaf angle and tiller number. We further revealed that the Pi-signaling-related transcription factor RLI1a releases its repression of the expression of OsPUB77 under Pi deficiency. Subsequently, the accumulated OsPUB77 influences shoot architecture by ubiquitinating OsBZR3 to inhibit BR signaling. Furthermore, we found that natural variation in two single-nucleotide polymorphisms within the OsPUB77 U-box domain coding OsPUB77<sup>R530</sup> results in higher ubiquitin transfer activity than OsPUB77<sup>I530</sup> due to a stronger interaction with E2. Introducing the OsPUB77pro::OsPUB77<sup>R530I</sup> transgene into the ospub77-1 background confirmed that OsPUB77<sup>R530</sup> results in more upright leaves. Collectively, our work identifies an RLI1a-OsPUB77-OsBZR3 module that mediates the crosstalk between Pi and BR signaling to shape shoot architecture in response to Pi starvation in rice.</p>","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"1864-1880"},"PeriodicalIF":24.1,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145186349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nitrogen fertilization has increased wheat yields since the Green Revolution, but these gains have plateaued. Excessive nitrogen application reduces nitrogen use efficiency by promoting nonproductive tillers, and balancing nitrogen uptake with tillering in wheat remains a challenge. Here, we demonstrate that TaNLP3 is a master regulator of nitrate signaling that, together with the SWI/SNF complex, regulates chromatin accessibility to fine-tune nitrate uptake and tiller formation through a temporal transcriptional cascade. In short-term nitrate signaling, TaNLP3 activates the expression of primary nitrate response genes, including TaNRT2.1, to promote nitrate uptake. In long-term nitrate signaling, TaLBD38 is induced by TaNLP3 and represses TaNRT2.1, limiting nitrate uptake and promoting tillering by inhibiting TaCKX4/5, negative modulators of tillering. Furthermore, we identified elite haplotypes of TaNLP3-3B, TaLBD38-4A, and TaNRT2.1-6B4 that enable higher yields under equivalent nitrogen supply. Taken together, our findings reveal the dynamic coordination between nitrate uptake and tillering under fluctuating nitrogen conditions, offering valuable resources for breeding wheat varieties with improved nitrogen use efficiency and productivity.
{"title":"An incoherent feed-forward loop coordinates nitrate uptake and tillering in wheat.","authors":"Weiya Xu, Yongming Chen, Yanxiao Niu, Bin Liu, Dejie Du, Xining Ning, Tong Huan, Yilan Zhou, Wensheng Ke, Lingfeng Miao, Weilong Guo, Mingming Xin, Yingyin Yao, Huiru Peng, Mingshan You, Zhongfu Ni, Qixin Sun, Jiewen Xing","doi":"10.1016/j.molp.2025.09.020","DOIUrl":"10.1016/j.molp.2025.09.020","url":null,"abstract":"<p><p>Nitrogen fertilization has increased wheat yields since the Green Revolution, but these gains have plateaued. Excessive nitrogen application reduces nitrogen use efficiency by promoting nonproductive tillers, and balancing nitrogen uptake with tillering in wheat remains a challenge. Here, we demonstrate that TaNLP3 is a master regulator of nitrate signaling that, together with the SWI/SNF complex, regulates chromatin accessibility to fine-tune nitrate uptake and tiller formation through a temporal transcriptional cascade. In short-term nitrate signaling, TaNLP3 activates the expression of primary nitrate response genes, including TaNRT2.1, to promote nitrate uptake. In long-term nitrate signaling, TaLBD38 is induced by TaNLP3 and represses TaNRT2.1, limiting nitrate uptake and promoting tillering by inhibiting TaCKX4/5, negative modulators of tillering. Furthermore, we identified elite haplotypes of TaNLP3-3B, TaLBD38-4A, and TaNRT2.1-6B4 that enable higher yields under equivalent nitrogen supply. Taken together, our findings reveal the dynamic coordination between nitrate uptake and tillering under fluctuating nitrogen conditions, offering valuable resources for breeding wheat varieties with improved nitrogen use efficiency and productivity.</p>","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":" ","pages":"1881-1900"},"PeriodicalIF":24.1,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145186410","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-03DOI: 10.1016/j.molp.2025.10.022
Kerstin Förster, Meike Sauerland, Georg Groth
Weed management remains a major agricultural challenge, especially as many problematic species rely on C4-photosynthesis, unlike most C3-crops. Conventional herbicides face growing limitations due to resistance and environmental concerns. High-throughput screening has identified synthetic small-molecule inhibitors (SMIs) that target key C4-specific enzymes with low micromolar potency, including phosphoenolpyruvate carboxylase (PEPC), NADP-malic enzyme (NADP-ME), and pyruvate phosphate dikinase (PPDK). In parallel, plant-derived secondary metabolites, notably flavonoids, have shown selective in vivo inhibition of C4-photosynthesis. These transgene-free compounds represent a promising new mode of herbicidal action. Here, we assess their potential to address current constraints in weed control, emphasize their high efficacy and distinct modes of action, and advocate for further research into sustainable, C4-targeted herbicides as a foundation for resilient crop protection in the face of climate change.
{"title":"From synthetic small molecules to natural substances: The C4 photosynthetic pathway as a target for sustainable weed control","authors":"Kerstin Förster, Meike Sauerland, Georg Groth","doi":"10.1016/j.molp.2025.10.022","DOIUrl":"https://doi.org/10.1016/j.molp.2025.10.022","url":null,"abstract":"Weed management remains a major agricultural challenge, especially as many problematic species rely on C4-photosynthesis, unlike most C3-crops. Conventional herbicides face growing limitations due to resistance and environmental concerns. High-throughput screening has identified synthetic small-molecule inhibitors (SMIs) that target key C4-specific enzymes with low micromolar potency, including phosphoenolpyruvate carboxylase (PEPC), NADP-malic enzyme (NADP-ME), and pyruvate phosphate dikinase (PPDK). In parallel, plant-derived secondary metabolites, notably flavonoids, have shown selective in vivo inhibition of C4-photosynthesis. These transgene-free compounds represent a promising new mode of herbicidal action. Here, we assess their potential to address current constraints in weed control, emphasize their high efficacy and distinct modes of action, and advocate for further research into sustainable, C4-targeted herbicides as a foundation for resilient crop protection in the face of climate change.","PeriodicalId":19012,"journal":{"name":"Molecular Plant","volume":"13 1","pages":""},"PeriodicalIF":27.5,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145434294","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}