The Baikal Rift Zone (BRZ) (Lake Baikal and the Barguzin Valley, Russia) is characterized by a large number of alkaline sulfidic springs. In zones with water temperatures below 44ºC and intensive outflow, massive bacterial fouling develops, the diversity and structure of which have not been previously studied. We investigated eight hydrotherms within the BRZ, and in seven of these we found and analyzed fouling dominated by colorless sulfur bacteria of the genus Thiothrix. The fouling communities contained members of 34 bacterial phyla, with a predominance of Pseudomonadota, Bacteroidota and Chloroflexota. Bacterial diversity differed at the genus and species level and was determined by a combination of physicochemical parameters. The morphology of Thiothrix sp. bacteria in the studied hot springs was similar: they formed rosettes with numerous filaments and deposited elemental sulfur in their cells. Based on the analysis of the tilS gene encoding tRNA-lysidine synthetase, one species, Ca. T. namsaraevi, previously detected near the hydrothermal vent in Zmeinaya Bay, represented this genus in six hot springs. Only the Goryachinsk hot spring located on the shore of Lake Baikal contained several genotypes of the genus Thiothrix homologous to Ca. T. namsaraevi in gene structure, as well as to other species. The predominance of the novel Thiothrix species in hydrotherms that are geographically distant from each other within the BRZ is probably determined by specific physical and chemical characteristics of the thermal waters due to the composition of the host rocks, as well as by harsh climate conditions: freezing of sulfur fouling development zones during the winter period and reduction of solar radiation due to significant snow cover.
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