Polymers and dendrimers are macromolecules, possessing unique and intriguing characteristics, that are widely applied in self-assembled functional materials, green catalysis, drug delivery and sensing devices. Traditional approaches for the structural characterization of polymers and dendrimers involve DLS, GPC, NMR, IR and TG, which provide their physiochemical features and ensemble information, whereas their unimolecular conformation and dispersion also are key features allowing to understand their transporting profile in confined ionic nanochannels. This work demonstrates the nanopore approach for the determination of charged homopolymers, neutral block copolymer and dendrimers under distinct bias potentials and pH conditions. The nanopore translocation properties reveal that the dispersion and transporting of PEI is pH-dependent, and its capture rate is much lower than that of PAA. The neutral block copolymer with longest molecular chain threads through with longest blockage duration, its highest capture rate was achieved in 0.5 M KCl at pH 5 with slow diffusion and high temporal resolution. The two generations of neutral dendrimers could also translocate under bias potentials, probably due to the ions adsorption on the dendrimers and driven by Brownian force. The TEG-81 with larger molecular size translocates with longer residence time and higher blockage ratio, as expected. Both of the dendrimers exhibit a higher blockage ratio at pH 7.4 than either acidic or alkalic condition, indicating a larger stretched conformation adopted under neutral condition. This work presents the analysis of unimolecular charged and neutral polymers and dendrimers, which will be insightful in understanding the self-assembly motion and transfer of synthetic macromolecules in confined space. It also provides a good indication for deciphering the macromolecule-nanopore interplay under electrophoretic condition.
高分子和树状大分子具有独特而有趣的特性,广泛应用于自组装功能材料、绿色催化、药物传递和传感器件等领域。聚合物和树状大分子结构表征的传统方法包括DLS、GPC、NMR、IR和TG,这些方法提供了它们的物理化学特征和系综信息,而它们的单分子构象和分散也是了解它们在受限离子纳米通道中的传输特征的关键特征。这项工作证明了纳米孔方法在不同偏压电位和pH条件下测定带电均聚物、中性嵌段共聚物和树状大分子。纳米孔易位特性表明PEI的分散和输运是ph依赖性的,其捕获率远低于PAA。中性嵌段共聚物分子链最长,阻滞时间最长,在0.5 M KCl、pH 5条件下捕获率最高,扩散速度慢,时间分辨率高。两代中性树状大分子在偏置电位下也会发生转移,这可能是由于离子吸附在树状大分子上,并受到布朗力的驱动。分子尺寸较大的TEG-81易位停留时间较长,堵塞率较高。两种树状大分子在pH 7.4条件下均表现出比酸性或碱性条件下更高的堵塞率,表明在中性条件下采用了更大的拉伸构象。这项工作提出了单分子带电和中性聚合物和树状大分子的分析,这将有助于理解合成大分子在有限空间中的自组装运动和转移。这也为在电泳条件下破译高分子与纳米孔的相互作用提供了良好的指示。
{"title":"Single-molecule resolution of the conformation of polymers and dendrimers with solid-state nanopores.","authors":"Meili Ren, Fupeng Qin, Yue Liu, Daixin Liu, Renata Pereira Lopes, Didier Astruc, Liyuan Liang","doi":"10.1016/j.talanta.2025.127544","DOIUrl":"10.1016/j.talanta.2025.127544","url":null,"abstract":"<p><p>Polymers and dendrimers are macromolecules, possessing unique and intriguing characteristics, that are widely applied in self-assembled functional materials, green catalysis, drug delivery and sensing devices. Traditional approaches for the structural characterization of polymers and dendrimers involve DLS, GPC, NMR, IR and TG, which provide their physiochemical features and ensemble information, whereas their unimolecular conformation and dispersion also are key features allowing to understand their transporting profile in confined ionic nanochannels. This work demonstrates the nanopore approach for the determination of charged homopolymers, neutral block copolymer and dendrimers under distinct bias potentials and pH conditions. The nanopore translocation properties reveal that the dispersion and transporting of PEI is pH-dependent, and its capture rate is much lower than that of PAA. The neutral block copolymer with longest molecular chain threads through with longest blockage duration, its highest capture rate was achieved in 0.5 M KCl at pH 5 with slow diffusion and high temporal resolution. The two generations of neutral dendrimers could also translocate under bias potentials, probably due to the ions adsorption on the dendrimers and driven by Brownian force. The TEG-81 with larger molecular size translocates with longer residence time and higher blockage ratio, as expected. Both of the dendrimers exhibit a higher blockage ratio at pH 7.4 than either acidic or alkalic condition, indicating a larger stretched conformation adopted under neutral condition. This work presents the analysis of unimolecular charged and neutral polymers and dendrimers, which will be insightful in understanding the self-assembly motion and transfer of synthetic macromolecules in confined space. It also provides a good indication for deciphering the macromolecule-nanopore interplay under electrophoretic condition.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"286 ","pages":"127544"},"PeriodicalIF":5.6,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142977263","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-01Epub Date: 2025-01-10DOI: 10.1016/j.talanta.2025.127570
Qingyang Sha, Xinsheng Li, Xixin Gu, Tao Yuan, Jianli Hua
Hypochlorous acid (HClO/ClO-) is a common ROS that exhibits elevated activity levels in cancer cells. In this study, an ClO--triggered TADF probe, PTZ-MNI, was designed based on a naphthalimide core. PTZ-MNI self-assemble in aqueous environments, exhibiting significantly enhanced fluorescence that demonstrated typical aggregation-induced delayed fluorescence (AIDF) characteristics. The probe not only showed high sensitivity to ClO- but also exhibited remarkable selectivity over other reactive oxygen species and disturbance. PTZ-MNI displayed TADF characteristic, including sensitivity to oxygen in toluene, insensitivity to oxygen in aggregated states that maintain long fluorescence lifetimes, a vertical conformation, and a minimal ΔEST of 0.01 eV. Cell imaging studies showed the probe could trace ClO- by red to green fluorescence in HeLa cell. The colocalization analysis indicated its excellent lysosome-targeting specificity. In addition, PTZ-MNI-O, the compound after oxidation, exhibited effective ROS generation ability and significant PDT effect after irradiation. This work provides guidance for the rational design of responsive TADF luminescent materials used in cell imaging and activatable-PDT.
{"title":"A self-aggregated thermally activated delayed fluorescence nanoprobe for HClO imaging and activatable photodynamic therapy.","authors":"Qingyang Sha, Xinsheng Li, Xixin Gu, Tao Yuan, Jianli Hua","doi":"10.1016/j.talanta.2025.127570","DOIUrl":"10.1016/j.talanta.2025.127570","url":null,"abstract":"<p><p>Hypochlorous acid (HClO/ClO<sup>-</sup>) is a common ROS that exhibits elevated activity levels in cancer cells. In this study, an ClO<sup>-</sup>-triggered TADF probe, PTZ-MNI, was designed based on a naphthalimide core. PTZ-MNI self-assemble in aqueous environments, exhibiting significantly enhanced fluorescence that demonstrated typical aggregation-induced delayed fluorescence (AIDF) characteristics. The probe not only showed high sensitivity to ClO<sup>-</sup> but also exhibited remarkable selectivity over other reactive oxygen species and disturbance. PTZ-MNI displayed TADF characteristic, including sensitivity to oxygen in toluene, insensitivity to oxygen in aggregated states that maintain long fluorescence lifetimes, a vertical conformation, and a minimal ΔE<sub>ST</sub> of 0.01 eV. Cell imaging studies showed the probe could trace ClO<sup>-</sup> by red to green fluorescence in HeLa cell. The colocalization analysis indicated its excellent lysosome-targeting specificity. In addition, PTZ-MNI-O, the compound after oxidation, exhibited effective ROS generation ability and significant PDT effect after irradiation. This work provides guidance for the rational design of responsive TADF luminescent materials used in cell imaging and activatable-PDT.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"286 ","pages":"127570"},"PeriodicalIF":5.6,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142982208","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-01Epub Date: 2025-01-27DOI: 10.1016/j.jcis.2025.01.226
Wenxuan Jiang, Yawen Wang, Chendong Puyang, Shoufeng Tang, He Guo
Emerging contaminants (ECs) pose great challenges to water treatment technology due to their complexity and high harm. In this paper, the method of dielectric barrier discharge (DBD) plasma coupled with iron-based catalyst (FeNC) activating periodate (PI) was first designed for ECs removal. The ingenious introduction of FeNC not only promotes the Fenton-like reaction of DBD system but also reduces the PI activation energy barrier and accelerates the electron shuttle between PI and pollutants. Based on the parameters evaluation of machine learning (ML), the calcination temperature of 575 ℃ and 17 % N addition were determined for best catalytic performance. XRD, Raman spectroscopy, XPS and density functional theory (DFT) analysis show that optimized catalyst has better electron shuttle characteristics and PI activation ability. Compared to DBD (78 %) and DBD/PI (94 %), DBD/FeNC/PI could achieve 100 % degradation efficiency of sulfadiazine (SDZ) in 12 min with high reaction rate. In addition to the effects of ROSs (1O2, OH and O2-), the efficient electron transfer mediated by FeNC and PI is the key to promoting the degradation of pollutants. The progressive dissociation of pyrimidine ring under the action of OH and electron transfer is the main pathway of SDZ degradation. The toxicity of intermediate products produced by the system is generally lower than that of SDZ. The system still has a high SDZ removal efficiency in actual water and has a good removal effect for other types of ECs, which also makes the system have a better practical prospect.
{"title":"Periodate activation by plasma coupled with FeNC for contaminant removal: Machine learning assisted catalyst optimization and electron shuttle mechanism.","authors":"Wenxuan Jiang, Yawen Wang, Chendong Puyang, Shoufeng Tang, He Guo","doi":"10.1016/j.jcis.2025.01.226","DOIUrl":"10.1016/j.jcis.2025.01.226","url":null,"abstract":"<p><p>Emerging contaminants (ECs) pose great challenges to water treatment technology due to their complexity and high harm. In this paper, the method of dielectric barrier discharge (DBD) plasma coupled with iron-based catalyst (FeNC) activating periodate (PI) was first designed for ECs removal. The ingenious introduction of FeNC not only promotes the Fenton-like reaction of DBD system but also reduces the PI activation energy barrier and accelerates the electron shuttle between PI and pollutants. Based on the parameters evaluation of machine learning (ML), the calcination temperature of 575 ℃ and 17 % N addition were determined for best catalytic performance. XRD, Raman spectroscopy, XPS and density functional theory (DFT) analysis show that optimized catalyst has better electron shuttle characteristics and PI activation ability. Compared to DBD (78 %) and DBD/PI (94 %), DBD/FeNC/PI could achieve 100 % degradation efficiency of sulfadiazine (SDZ) in 12 min with high reaction rate. In addition to the effects of ROSs (<sup>1</sup>O<sub>2</sub>, OH and O<sub>2</sub><sup>-</sup>), the efficient electron transfer mediated by FeNC and PI is the key to promoting the degradation of pollutants. The progressive dissociation of pyrimidine ring under the action of OH and electron transfer is the main pathway of SDZ degradation. The toxicity of intermediate products produced by the system is generally lower than that of SDZ. The system still has a high SDZ removal efficiency in actual water and has a good removal effect for other types of ECs, which also makes the system have a better practical prospect.</p>","PeriodicalId":351,"journal":{"name":"Journal of Colloid and Interface Science","volume":"685 ","pages":"975-987"},"PeriodicalIF":9.4,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143062336","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Graphitic carbon nitride (g-C3N4) has been regarded as highly potential photocatalyst for solar energy utilization. However, the restricted absorption of visible light for pristine g-C3N4 significantly limits the solar-light-driven chemical reaction efficiency. Herein, structurally distorted g-C3N4 nanosheets with awakened n-π* electron transition were successfully synthesized through hexamethylenetetramine (HMTA)-involved supercritical CO2 (scCO2) treatment and following pyrolysis of melamine precursor. ScCO2 treatment was conductive to homogeneously dissoving melamine precursor and HMTA, and then the modification by HMTA with three-dimensional structure changed the g-C3N4 photocatalyst from a symmetrical planar structure to an asymmetrical non-planar structure. The resulting awakened n-π* electron transition in structurally distorted g-C3N4 nanosheets greatly extended the photoresponse range of g-C3N4 and increased the amount of catalytically active π electrons. Moreover, the unique distorted structure of g-C3N4 enhanced photogenerated charge carriers separation and provided sufficient reactive sites for photocatalytic H2 production. Consequently, the structurally distorted g-C3N4 nanosheets exhibited enhanced photocatalytic H2 production performance, which was up to 6.4 times that of pristine g-C3N4. This work presents a promising scCO2 strategy towards precursor treatment to regulate the microstructure of g-C3N4, and provides valuable guidance to obtain efficient g-C3N4 photocatalyst by microstructure engineering.
{"title":"Awakening n-π* electron transition in structurally distorted g-C<sub>3</sub>N<sub>4</sub> nanosheets via hexamethylenetetramine-involved supercritical CO<sub>2</sub> treatment towards efficient photocatalytic H<sub>2</sub> production.","authors":"Xing Kang, Yuzhou Jiang, Jinwen Shi, Liuhao Mao, Yanbing Liu, Binjiang Zhai, Hui Jin, Liejin Guo","doi":"10.1016/j.jcis.2025.01.179","DOIUrl":"10.1016/j.jcis.2025.01.179","url":null,"abstract":"<p><p>Graphitic carbon nitride (g-C<sub>3</sub>N<sub>4</sub>) has been regarded as highly potential photocatalyst for solar energy utilization. However, the restricted absorption of visible light for pristine g-C<sub>3</sub>N<sub>4</sub> significantly limits the solar-light-driven chemical reaction efficiency. Herein, structurally distorted g-C<sub>3</sub>N<sub>4</sub> nanosheets with awakened n-π* electron transition were successfully synthesized through hexamethylenetetramine (HMTA)-involved supercritical CO<sub>2</sub> (scCO<sub>2</sub>) treatment and following pyrolysis of melamine precursor. ScCO<sub>2</sub> treatment was conductive to homogeneously dissoving melamine precursor and HMTA, and then the modification by HMTA with three-dimensional structure changed the g-C<sub>3</sub>N<sub>4</sub> photocatalyst from a symmetrical planar structure to an asymmetrical non-planar structure. The resulting awakened n-π* electron transition in structurally distorted g-C<sub>3</sub>N<sub>4</sub> nanosheets greatly extended the photoresponse range of g-C<sub>3</sub>N<sub>4</sub> and increased the amount of catalytically active π electrons. Moreover, the unique distorted structure of g-C<sub>3</sub>N<sub>4</sub> enhanced photogenerated charge carriers separation and provided sufficient reactive sites for photocatalytic H<sub>2</sub> production. Consequently, the structurally distorted g-C<sub>3</sub>N<sub>4</sub> nanosheets exhibited enhanced photocatalytic H<sub>2</sub> production performance, which was up to 6.4 times that of pristine g-C<sub>3</sub>N<sub>4</sub>. This work presents a promising scCO<sub>2</sub> strategy towards precursor treatment to regulate the microstructure of g-C<sub>3</sub>N<sub>4</sub>, and provides valuable guidance to obtain efficient g-C<sub>3</sub>N<sub>4</sub> photocatalyst by microstructure engineering.</p>","PeriodicalId":351,"journal":{"name":"Journal of Colloid and Interface Science","volume":"685 ","pages":"716-723"},"PeriodicalIF":9.4,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143035554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Developing insertion-type anodes is essential for designing high-performance "rocking chair" zinc-ion batteries. BiOCl shows great potential as an insertion-type anode material for Zn2+ storage due to its high specific capacity and unique layered structure. However, the development of BiOCl has been significantly hampered by its poor stability and kinetics during cycling. In this study, Br-doped and carbon-coated BiOCl ultrathin nanosheets (Br-BiOCl@NC) are synthesized as high-performance anodes. The ultrathin nanosheet morphology facilitates Zn2+/H+ transfer and the Br doping reduces the Zn2+/H+ diffusion barrier. Additionally, the carbon coating enhances the electronic transfer. Furthermore, an insertion-conversion mechanism involving H+ and Zn2+ storage is revealed by ex-situ tests. Therefore, Br-BiOCl@NC exhibits a high discharge capacity of 174 mA h/g at 500 mA/g without capacity degradation after 1000 cycles. The Br-BiOCl@NC//MnO2 full cell presents a discharge capacity of ≈ 120 mA h/g at 200 mA/g. This work offers valuable insights for the design of high-performance insertion-type anode materials in zinc-ion batteries.
{"title":"In-situ conversion of BiOBr to Br-doped BiOCl nanosheets for \"rocking chair\" zinc-ion battery.","authors":"Yuzhu Qian, Qing Zhang, Lijuan Chen, Yaoyong Dong, Ting Song, Yong Pei, Xianyou Wang, Xiongwei Wu, Xuejun Zheng, Wenyuan He, Bei Long","doi":"10.1016/j.jcis.2025.01.171","DOIUrl":"10.1016/j.jcis.2025.01.171","url":null,"abstract":"<p><p>Developing insertion-type anodes is essential for designing high-performance \"rocking chair\" zinc-ion batteries. BiOCl shows great potential as an insertion-type anode material for Zn<sup>2+</sup> storage due to its high specific capacity and unique layered structure. However, the development of BiOCl has been significantly hampered by its poor stability and kinetics during cycling. In this study, Br-doped and carbon-coated BiOCl ultrathin nanosheets (Br-BiOCl@NC) are synthesized as high-performance anodes. The ultrathin nanosheet morphology facilitates Zn<sup>2+</sup>/H<sup>+</sup> transfer and the Br doping reduces the Zn<sup>2+</sup>/H<sup>+</sup> diffusion barrier. Additionally, the carbon coating enhances the electronic transfer. Furthermore, an insertion-conversion mechanism involving H<sup>+</sup> and Zn<sup>2+</sup> storage is revealed by ex-situ tests. Therefore, Br-BiOCl@NC exhibits a high discharge capacity of 174 mA h/g at 500 mA/g without capacity degradation after 1000 cycles. The Br-BiOCl@NC//MnO<sub>2</sub> full cell presents a discharge capacity of ≈ 120 mA h/g at 200 mA/g. This work offers valuable insights for the design of high-performance insertion-type anode materials in zinc-ion batteries.</p>","PeriodicalId":351,"journal":{"name":"Journal of Colloid and Interface Science","volume":"685 ","pages":"743-751"},"PeriodicalIF":9.4,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143035707","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Spatial metabolomics offers the combination of molecular identification and localization. As a tool for spatial metabolomics, mass spectrometry imaging (MSI) can provide detailed information on localization. However, molecular annotation with MSI is challenging due to the lack of separation prior to mass spectrometric analysis. Contrarily, surface sampling capillary electrophoresis mass spectrometry (SS-CE-MS) provides detailed molecular information, although the size of the sampling sites is modest. Here, we describe a platform for spatial metabolomics where MSI using pneumatically assisted nanospray desorption electrospray ionization (PA-nano-DESI) is combined with SS-CE-MS to gain both in-depth chemical information and spatial localization from thin tissue sections. We present the workflow, including the user-friendly setup and switching between the techniques, compare the obtained data, and demonstrate a quantitative approach when using the platform for spatial metabolomics of ischemic stroke.
{"title":"Spatial metabolomics platform combining mass spectrometry imaging and in-depth chemical characterization with capillary electrophoresis.","authors":"Leonidas Mavroudakis, Anastasia Golubova, Ingela Lanekoff","doi":"10.1016/j.talanta.2024.127460","DOIUrl":"10.1016/j.talanta.2024.127460","url":null,"abstract":"<p><p>Spatial metabolomics offers the combination of molecular identification and localization. As a tool for spatial metabolomics, mass spectrometry imaging (MSI) can provide detailed information on localization. However, molecular annotation with MSI is challenging due to the lack of separation prior to mass spectrometric analysis. Contrarily, surface sampling capillary electrophoresis mass spectrometry (SS-CE-MS) provides detailed molecular information, although the size of the sampling sites is modest. Here, we describe a platform for spatial metabolomics where MSI using pneumatically assisted nanospray desorption electrospray ionization (PA-nano-DESI) is combined with SS-CE-MS to gain both in-depth chemical information and spatial localization from thin tissue sections. We present the workflow, including the user-friendly setup and switching between the techniques, compare the obtained data, and demonstrate a quantitative approach when using the platform for spatial metabolomics of ischemic stroke.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"286 ","pages":"127460"},"PeriodicalIF":5.6,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142976767","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Bacterial bloodstream infections cause high morbidity and mortality. Although bacteria can be detected by various methods, culture methods are often used for the detection of live, accurate, reproducible, and selective bacterial identification. However, the culture method is time-consuming, and clinicians often start treatment immediately due to the long determination time. This reduces the bacterial density detectable by culture, and in some cases, makes determination difficult. To overcome this challenge, we propose a method that directly combines bacteriophage-based lysis with quantitative PCR (qPCR). This method enables the simple and rapid detection of bacteria without the need for pre-concentration or DNA extraction steps. Escherichia coli K12 (E. coli K12) was used as the model bacterium, and bacteria lysed by the E. coli K12-specific bacteriophage were detected using qPCR. The total analysis time was less than 3 h, and only live bacterial cells were selectively lysed. The method was also used to detect bacteria spiked into reference plasma samples, and bacterial DNA was detected via qPCR. The results obtained from the calibration graph created with cultured bacteria and the one created by spiking bacteria into reference plasma were consistent. The similarities between the calibration graphs from both methods were found to be in the range of 92-102.7 %. The LOD and LOQ values for bacteria spiked into reference plasma were calculated as 14.80 and 3.5x10³ CFU/mL, respectively.
{"title":"Bacteriophage-based live bacteria detection for rapid infection diagnosis.","authors":"Merve Calimci, Tugba Tezcan, Emine Kubra Tayyarcan, Kubra Guven, Ismail Hakki Boyaci, Ugur Tamer","doi":"10.1016/j.talanta.2025.127569","DOIUrl":"10.1016/j.talanta.2025.127569","url":null,"abstract":"<p><p>Bacterial bloodstream infections cause high morbidity and mortality. Although bacteria can be detected by various methods, culture methods are often used for the detection of live, accurate, reproducible, and selective bacterial identification. However, the culture method is time-consuming, and clinicians often start treatment immediately due to the long determination time. This reduces the bacterial density detectable by culture, and in some cases, makes determination difficult. To overcome this challenge, we propose a method that directly combines bacteriophage-based lysis with quantitative PCR (qPCR). This method enables the simple and rapid detection of bacteria without the need for pre-concentration or DNA extraction steps. Escherichia coli K12 (E. coli K12) was used as the model bacterium, and bacteria lysed by the E. coli K12-specific bacteriophage were detected using qPCR. The total analysis time was less than 3 h, and only live bacterial cells were selectively lysed. The method was also used to detect bacteria spiked into reference plasma samples, and bacterial DNA was detected via qPCR. The results obtained from the calibration graph created with cultured bacteria and the one created by spiking bacteria into reference plasma were consistent. The similarities between the calibration graphs from both methods were found to be in the range of 92-102.7 %. The LOD and LOQ values for bacteria spiked into reference plasma were calculated as 14.80 and 3.5x10³ CFU/mL, respectively.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"286 ","pages":"127569"},"PeriodicalIF":5.6,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142982219","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Near-infrared (NIR) spectroscopy analysis technology has become a widely utilized analytical tool in various fields due to its convenience and efficiency. However, with the promotion of instrument precision, the spectral dimension can now be expanded to include hundreds of dimensions. This expansion results in time-consuming modeling processes and a decrease in model performance. Hence, it is crucial to carefully choose representative features before constructing models. This paper focuses on the limitations of filter algorithms, which can only sort features and cannot directly determine the best subset of features. A hybrid method of combination of the Max-Relevance Min-Redundancy (mRMR) algorithm and the Genetic Algorithm (GA), as well as filter and wrapper feature selection methods, are combined to select appropriate features automatically. This hybrid algorithm retains the features in each individual that are considered to have a strong correlation and low redundancy by the mRMR algorithms during each iteration of the GA. On the other hand, it deletes the features that are regarded as having little correlation or high redundancy. Through the process of iteration, the feature subset is continuously optimized. We use the proposed hybrid method to select features on two datasets and establish various models to verify our proposed method in this paper. The experimental results indicate the feature selection approach, which combines mRMR with the GA, covers the advantages of both feature selection methods. This approach can select features that show good predictive performance. When compared with other common feature selection methods, such as the Uninformative Variable Elimination algorithm (UVE), Competitive Adaptive Reweighted Sampling algorithm (CARS), Successive Projections Algorithm (SPA), Iteratively Retains Informative Variables (IRIV), and GA, the hybrid algorithm can select a larger number of feature variables that are both representative and informative, additionally, it significantly enhances the predictive performance of the model.
近红外(NIR)光谱分析技术因其便捷、高效的特点,已成为各领域广泛使用的分析工具。然而,随着仪器精度的提高,光谱维度现在可以扩展到数百个维度。这种扩展导致建模过程耗时,模型性能下降。因此,在构建模型之前仔细选择具有代表性的特征至关重要。过滤算法只能对特征进行排序,不能直接确定最佳特征子集,本文重点讨论过滤算法的局限性。本文结合了最大相关性最小冗余(mRMR)算法和遗传算法(GA)的混合方法,以及过滤器和包装特征选择方法,来自动选择合适的特征。在遗传算法的每次迭代中,这种混合算法保留了 mRMR 算法认为每个个体中相关性强、冗余度低的特征。另一方面,它删除了被认为相关性小或冗余度高的特征。通过迭代过程,特征子集不断得到优化。本文使用所提出的混合方法在两个数据集上选择特征,并建立各种模型来验证我们所提出的方法。实验结果表明,mRMR 与 GA 结合的特征选择方法涵盖了两种特征选择方法的优点。这种方法可以选择出具有良好预测性能的特征。与其他常见的特征选择方法,如无信息变量消除算法(UVE)、竞争性自适应重加权采样算法(CARS)、连续投影算法(SPA)、迭代保留有信息变量算法(IRIV)和 GA 相比,混合算法可以选择更多既有代表性又有信息量的特征变量,而且还能显著提高模型的预测性能。
{"title":"Wavelength selection method for near-infrared spectroscopy based on the combination of mutual information and genetic algorithm.","authors":"Xiao-Hui Ma, Zheng-Guang Chen, Shuo Liu, Jin-Ming Liu, Xue-Song Tian","doi":"10.1016/j.talanta.2025.127573","DOIUrl":"10.1016/j.talanta.2025.127573","url":null,"abstract":"<p><p>Near-infrared (NIR) spectroscopy analysis technology has become a widely utilized analytical tool in various fields due to its convenience and efficiency. However, with the promotion of instrument precision, the spectral dimension can now be expanded to include hundreds of dimensions. This expansion results in time-consuming modeling processes and a decrease in model performance. Hence, it is crucial to carefully choose representative features before constructing models. This paper focuses on the limitations of filter algorithms, which can only sort features and cannot directly determine the best subset of features. A hybrid method of combination of the Max-Relevance Min-Redundancy (mRMR) algorithm and the Genetic Algorithm (GA), as well as filter and wrapper feature selection methods, are combined to select appropriate features automatically. This hybrid algorithm retains the features in each individual that are considered to have a strong correlation and low redundancy by the mRMR algorithms during each iteration of the GA. On the other hand, it deletes the features that are regarded as having little correlation or high redundancy. Through the process of iteration, the feature subset is continuously optimized. We use the proposed hybrid method to select features on two datasets and establish various models to verify our proposed method in this paper. The experimental results indicate the feature selection approach, which combines mRMR with the GA, covers the advantages of both feature selection methods. This approach can select features that show good predictive performance. When compared with other common feature selection methods, such as the Uninformative Variable Elimination algorithm (UVE), Competitive Adaptive Reweighted Sampling algorithm (CARS), Successive Projections Algorithm (SPA), Iteratively Retains Informative Variables (IRIV), and GA, the hybrid algorithm can select a larger number of feature variables that are both representative and informative, additionally, it significantly enhances the predictive performance of the model.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"286 ","pages":"127573"},"PeriodicalIF":5.6,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142982302","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Accurately detecting cysteine (Cys) in vivo is crucial for diagnosing Cys-related diseases. A novel ratiometric fluorescent probe featuring dual near-infrared emission is developed in this study for the in vivo ratio imaging of Cys. The probe comprises a hemicyanine organic small-molecule dye (HCy-CYS) with specific Cys recognition capabilities covalently coupled with carbon dots (CDs) synthesized using glutathione (GSH) as the carbon source (GCDs), forming a unique composite nanofluorescent probe (GCDs@CYS). The probe undergoes a specific reaction with acrylate upon the addition of Cys, converting HCy-CYS to HCy-OH. Consequently, the GCD fluorescence intensity at 685 nm gradually decreases, whereas that of HCy-OH at 720 nm progressively increases, yielding a ratiometric fluorescence signal. Notably, both emission wavelengths of the probe exceed 650 nm, thereby effectively mitigating the interference from background signals during cellular and in vivo imaging. Furthermore, the probe demonstrates high specificity for Cys, enabling its differentiation from homocysteine and GSH. The Cys concentration and fluorescence ratiometric intensity exhibit a strong linear correlation at 10-150 μM with a detection limit of 0.95 μM. These results indicate that the ratiometric fluorescent probe can serve as a valuable tool for monitoring Cys-related physiological or pathological processes.
{"title":"A ratiometric fluorescent probe with dual near infrared emission for in vivo ratio imaging of cysteine.","authors":"Bing Zheng, Shulong Wang, Jiayao Xu, Lixian Huang, Shulin Zhao","doi":"10.1016/j.talanta.2025.127564","DOIUrl":"10.1016/j.talanta.2025.127564","url":null,"abstract":"<p><p>Accurately detecting cysteine (Cys) in vivo is crucial for diagnosing Cys-related diseases. A novel ratiometric fluorescent probe featuring dual near-infrared emission is developed in this study for the in vivo ratio imaging of Cys. The probe comprises a hemicyanine organic small-molecule dye (HCy-CYS) with specific Cys recognition capabilities covalently coupled with carbon dots (CDs) synthesized using glutathione (GSH) as the carbon source (GCDs), forming a unique composite nanofluorescent probe (GCDs@CYS). The probe undergoes a specific reaction with acrylate upon the addition of Cys, converting HCy-CYS to HCy-OH. Consequently, the GCD fluorescence intensity at 685 nm gradually decreases, whereas that of HCy-OH at 720 nm progressively increases, yielding a ratiometric fluorescence signal. Notably, both emission wavelengths of the probe exceed 650 nm, thereby effectively mitigating the interference from background signals during cellular and in vivo imaging. Furthermore, the probe demonstrates high specificity for Cys, enabling its differentiation from homocysteine and GSH. The Cys concentration and fluorescence ratiometric intensity exhibit a strong linear correlation at 10-150 μM with a detection limit of 0.95 μM. These results indicate that the ratiometric fluorescent probe can serve as a valuable tool for monitoring Cys-related physiological or pathological processes.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"286 ","pages":"127564"},"PeriodicalIF":5.6,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142968969","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-01Epub Date: 2025-01-10DOI: 10.1016/j.talanta.2025.127565
Jiang Xue Dong, Kai Xiao, Xiao Li Wu, Zhi Ying Zhong, Hao Yun Yuan, Shi Gang Shen, Ming Su, Na Li, Zhong Feng Gao, Fan Xia
Pursuing nanomaterials with high fluorescence quantum yields is of great significance in the fields of bioimaging, medical diagnosis, and food safety monitoring. This work reports on orange-emitting aggregation-induced emission (AIE) copper nanoclusters (Cu NCs) integrated with blue-emitting nitrogen-doped carbon dots (N-CDs), which enables highly sensitive detection of S2- and Zn2+ ions through an off-on ratiometric fluorescence method. The highly emissive Cu NCs was doped by Ce3+ with a high quantum yield of 51.30 % in aqueous solution. The S2- can induce fluorescence quenching of AIE Cu NCs/N-CDs from orange to blue, while Zn2+ can restore the orange fluorescence. The probe provided linear detection ranges of 0.5-170 μM for S2- and 0.05-200 μM for Zn2+, with detection limits of 0.17 μM and 0.02 μM, respectively. Moreover, a smartphone assistant ratiometric fluorescent test strips were developed for the rapid and visual detection of S2- and Zn2+. The AIE Cu NCs/N-CDs probe exhibited diverse fluorescence color responses, high fluorescence stability, and low cytotoxicity. The ratiometric system was successfully applied to the detection of S2- and Zn2+ in real water samples as well as in cellular and living imaging, demonstrating its potential in biochemical analysis and food safety monitoring.
追求高荧光量子产率的纳米材料在生物成像、医学诊断、食品安全监测等领域具有重要意义。本文报道了一种结合蓝色发射氮掺杂碳点(N-CDs)的橙色发射聚集诱导发射(AIE)铜纳米团簇(Cu NCs),通过开关比例荧光法实现了对S2-和Zn2+离子的高灵敏度检测。采用Ce3+掺杂制备了高发射率的Cu NCs,在水溶液中量子产率高达51.30%。S2-可以诱导AIE Cu nc /N-CDs的荧光从橙色猝灭为蓝色,而Zn2+可以恢复其橙色荧光。探针对S2-和Zn2+的线性检测范围分别为0.5 ~ 170 μM和0.05 ~ 200 μM,检出限分别为0.17 μM和0.02 μM。此外,还开发了一种智能手机辅助比例荧光试纸,用于快速、直观地检测S2-和Zn2+。AIE Cu NCs/N-CDs探针具有不同的荧光颜色响应,高荧光稳定性和低细胞毒性。该系统已成功应用于实际水样中S2-和Zn2+的检测以及细胞和活体成像,显示了其在生化分析和食品安全监测方面的潜力。
{"title":"High quantum yield copper nanoclusters integrated with nitrogen-doped carbon dots for off-on ratiometric fluorescence sensing of S<sup>2-</sup> and Zn<sup>2</sup>.","authors":"Jiang Xue Dong, Kai Xiao, Xiao Li Wu, Zhi Ying Zhong, Hao Yun Yuan, Shi Gang Shen, Ming Su, Na Li, Zhong Feng Gao, Fan Xia","doi":"10.1016/j.talanta.2025.127565","DOIUrl":"10.1016/j.talanta.2025.127565","url":null,"abstract":"<p><p>Pursuing nanomaterials with high fluorescence quantum yields is of great significance in the fields of bioimaging, medical diagnosis, and food safety monitoring. This work reports on orange-emitting aggregation-induced emission (AIE) copper nanoclusters (Cu NCs) integrated with blue-emitting nitrogen-doped carbon dots (N-CDs), which enables highly sensitive detection of S<sup>2-</sup> and Zn<sup>2+</sup> ions through an off-on ratiometric fluorescence method. The highly emissive Cu NCs was doped by Ce<sup>3+</sup> with a high quantum yield of 51.30 % in aqueous solution. The S<sup>2-</sup> can induce fluorescence quenching of AIE Cu NCs/N-CDs from orange to blue, while Zn<sup>2+</sup> can restore the orange fluorescence. The probe provided linear detection ranges of 0.5-170 μM for S<sup>2-</sup> and 0.05-200 μM for Zn<sup>2+</sup>, with detection limits of 0.17 μM and 0.02 μM, respectively. Moreover, a smartphone assistant ratiometric fluorescent test strips were developed for the rapid and visual detection of S<sup>2-</sup> and Zn<sup>2+</sup>. The AIE Cu NCs/N-CDs probe exhibited diverse fluorescence color responses, high fluorescence stability, and low cytotoxicity. The ratiometric system was successfully applied to the detection of S<sup>2-</sup> and Zn<sup>2+</sup> in real water samples as well as in cellular and living imaging, demonstrating its potential in biochemical analysis and food safety monitoring.</p>","PeriodicalId":435,"journal":{"name":"Talanta","volume":"286 ","pages":"127565"},"PeriodicalIF":5.6,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142982237","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}