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Non-Coding RNAs Involved in the Regulation of Signaling Pathways as Possible Markers of Non-Alcoholic Fatty Liver Disease Progression 参与信号通路调控的非编码 RNA 可能是非酒精性脂肪肝进展的标志物
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024607742
L. V. Topchieva, I. V. Kurbatova, O. P. Dudanova, A. V. Vasilyeva, G. A. Zhulay

Abstract

The current understanding of the role of non-coding RNAs in the regulation of signaling pathways that control lipid accumulation and the development of inflammation in non-alcoholic fatty liver disease (NAFLD) is outlined. The contribution of peroxisome proliferator-activated receptors (PPARs) to changes in lipid metabolism and the formation of lipotoxicity as trigger mechanisms of NAFLD is considered. The role of TGFβ, TNFα/NF-κb, IL-6/JAK/STAT3 signaling pathways in the activation of stellate cells, liver fibrogenesis and the progression of NAFLD has been demonstrated. Analysis of literature data has revealed a number of microRNAs and long non-coding RNAs (lncRNAs) presumably associated with the regulation of these signaling pathways in this disease. They may probably have prognostic significance for differentiating clinical forms and severity of NAFLD.

摘要 概述了非编码 RNA 在调控非酒精性脂肪性肝病(NAFLD)中控制脂质积累和炎症发展的信号通路中的作用。研究考虑了过氧化物酶体增殖激活受体(PPARs)对非酒精性脂肪肝的脂质代谢变化和脂毒性形成的作用。TGFβ、TNFα/NF-κb、IL-6/JAK/STAT3 信号通路在星状细胞活化、肝纤维化和非酒精性脂肪肝进展中的作用已得到证实。对文献数据的分析表明,一些 microRNA 和长非编码 RNA(lncRNA)可能与该疾病中这些信号通路的调控有关。它们可能对区分非酒精性脂肪肝的临床形式和严重程度具有预后意义。
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引用次数: 0
Impact of Biotic and Abiotic Factors on Epibiotic Communities of the Barents Sea Red King Crab 生物和非生物因素对巴伦支海红帝王蟹表生群落的影响
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024607638
A. G. Dvoretsky, V. G. Dvoretsky

Abstract

Based on a long-term dataset of species composition and infestation levels of associated organisms on the invasive Barents Sea red king crab, a multivariate analysis was conducted to determine the contributions of biotic and abiotic factors to the fouling community structure. Results indicate that host size and exoskeleton age were the most significant factors for diversity indices and infestation intensity. Abiotic factors played a lesser role in the formation of fouling communities. Temperature conditions during the mass molting periods were found to have significant effects, apparently acting as a trigger for the primary settlement of crab shells by benthic organisms. Our data not only provide new insights into the formation of fouling communities of decapod crustaceans, but also provide valuable information for further studies on the adaptation process of the red crab to the conditions of the Barents Sea.

摘要根据入侵巴伦支海红帝王蟹上相关生物的物种组成和侵扰水平的长期数据集,进行了多元分析,以确定生物和非生物因素对污损群落结构的贡献。结果表明,宿主大小和外骨骼年龄是影响多样性指数和侵扰强度的最重要因素。非生物因素在污损群落形成中的作用较小。研究发现,大量蜕壳期间的温度条件具有重要影响,显然是底栖生物在蟹壳上进行初级沉降的触发因素。我们的数据不仅为十足类甲壳动物污损群落的形成提供了新的见解,还为进一步研究红蟹对巴伦支海条件的适应过程提供了宝贵的信息。
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引用次数: 0
Site Preference of the Myxosporean Genus Kudoa Meglitsch, 1947, in the World Fauna Fish at Certain Depths Kudoa Meglitsch,1947 年,世界鱼类动物区系鱼类在特定深度的地点偏好
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359023606651
V. M. Yurakhno

This paper provides first information about possible occurrence of the myxosporean genus Kudoa in fish of the World Ocean and, in some cases, in associated freshwater bodies at different depths. An analysis of the theoretically assumed site preference by Kudoa of different habitat depths of their fish hosts in the World Fauna is made for the first time. It is revealed that all species of the myxosporean genus Kudoa can be found in coastal shelf zones, of which 90 species (70.8% of the total) occur exclusively in the shelf zone, and the hosts of 50 Kudoa species (39.4%) live in its shallowest part (down to 50 m). 16 species (12.6%) and 14 species (11%) of this genus can be found at depths from the shelf to 500 meters and 1000 meters, respectively. From 1 to 3 species of Kudoa can be encountered theoretically at 1500 m to 3000 m, which is from 0.8 to 2.4% of all known representatives of these parasites.

本文首次提供了有关世界海洋鱼类中可能存在的粘孢子虫属 Kudoa 的信息,在某些情况下,还可能存在于不同深度的相关淡水水体中。本文首次对世界动物群中 Kudoa 对其鱼类宿主不同栖息地深度的理论偏好进行了分析。结果显示,粘孢子虫属 Kudoa 的所有物种都能在沿海陆架区找到,其中 90 个物种(占总数的 70.8%)只出现在陆架区,50 个 Kudoa 物种(占 39.4%)的宿主生活在陆架区最浅的部分(最深 50 米)。该属的 16 个物种(12.6%)和 14 个物种(11%)分别生活在陆架至 500 米和 1000 米的深度。理论上,在 1500 米至 3000 米处可发现 1 至 3 种 Kudoa,占这些寄生虫所有已知代表种类的 0.8%至 2.4%。
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引用次数: 0
First Information on the Ultrathin Structure of the Tegument of the “Cystacanth” in Acanthocephala Neoechinorhynchus beringianus Mikhailova et Atrashkevich, 2008 (Eoacanthocephala, Neoechinorynchidae) Acanthocephala Neoechinorhynchus beringianus Mikhailova et Atrashkevich, 2008 (Eoacanthocephala, Neoechinorynchidae)中 "囊棘鱼 "超薄表皮结构的第一手资料
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024607614
K. V. Kusenko, V. P. Nikishin

Abstract

The ultrastructure of the metasoma tegument of the developing acanthocephalan Neoechinorhynchus beringianus (Neoechinorhynchidae) was studied for the first time for representatives of the class Eoacanthocephala. The completely developed acanthellae of this species were shown to have no cyst, which is a characteristic feature of cystacanths at these stages of development in other acanthocephalan classes, and protection against the host response is provided by a thick layer of glycocalyx on the tegument surface. The tegument is represented by a typical symplast and includes a standard set of layers (cross-striated, felt-fibrous, radial-fibrous, and tubular), and is underlain by a basal plate and two layers of muscles. The absence of a cyst in the completely developed acanthellae under study does not permit us to use the term “cystacanth” concerning them.

摘要首次研究了发育中的棘尾虫Neoechinorhynchus beringianus(Neoechinorhynchidae)甲壳的超微结构。研究表明,该物种发育完全的棘尾虫没有囊肿,而囊肿是其他棘尾虫类在这些发育阶段的特征。鳞皮由典型的合体构成,包括一系列标准层(横纹、毡状纤维、径向纤维和管状),下面是基板和两层肌肉。由于研究中发育完全的针栉水母没有囊肿,因此我们不能使用 "囊栉 "一词来称呼它们。
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引用次数: 0
The Presence and Microstructure of Down Components of Feathers in Nineteen Orders of Birds (Aves) 十九类鸟类羽毛中羽绒成分的存在和微观结构
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024608590
O. L. Silaeva, S. A. Bukreev, R. M. Khatsaeva

Abstract

We used light and raster electron microscopy to study for the first time in research the microstructure of the down parts of feather vanes consisting of combined barbules (“barbule I”) provided with both typical plumulaceous barbules (“barbicel,” “barbule II”) and modified plumulaceous barbules (MBs). Their presence and distribution over different pterylae were studied on 3330 feathers from 441 birds of 129 species belonging to 45 families of 19 orders. Information about the presence of afterfeathers and of umbilical barbs on feathers was clarified. Modified plumulaceous barbules were found on feathers of all species studied, more often on coverts, less often on wing and tail feathers. Down components were studied in most detail in the orders Charadriiformes and Passeriformes; in the former, the presence or absence of MB was specific at the level of family or genus, while in the latter, afterfeathers or umbilical barbs were never found together on the same feather. The possibility is discussed of using various combinations of down components and features of their microstructure as an important addition to the integrated system of ptilological taxa identification by feathers (including single feathers) and in some cases even by the pteryla to which the tested feather belongs.

摘要 我们首次使用光镜和光栅电子显微镜研究了羽毛叶片绒毛部分的显微结构,这些绒毛部分由组合倒钩("倒钩I")和典型的羽状倒钩("倒钩Cel"、"倒钩II")以及改良的羽状倒钩(MBs)组成。我们对隶属于 19 目 45 科 129 种 441 种鸟类的 3330 根羽毛进行了研究,了解了它们的存在以及在不同翼片上的分布情况。研究还澄清了羽毛上是否存在羽后钩刺和脐钩刺的信息。在所研究的所有物种的羽毛上都发现了改良的羽状倒钩,较多出现在覆羽上,较少出现在翼羽和尾羽上。对绒毛成分研究最详细的是蝶形目和百舌鸟形目;在前者中,MB 的存在或不存在是科或属一级的特异性,而在后者中,后羽或脐倒刺从未在同一根羽毛上同时发现。讨论了利用绒毛成分的各种组合及其微观结构特征作为通过羽毛(包括单根羽毛)以及在某些情况下甚至通过被测羽毛所属的翼层来识别鸟类分类群的综合系统的重要补充的可能性。
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引用次数: 0
Automated Identification and Counting of Saigas (Saiga tatarica) by Using Deep Convolutional Neural Networks in High-Resolution Satellite Images 在高分辨率卫星图像中使用深度卷积神经网络自动识别和计算 "斋加"(Saiga tatarica)数量
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024608784
V. V. Rozhnov, A. L. Salman, A. A. Yachmennikova, A. A. Lushchekina, P. A. Salman

Abstract

We utilized a two-phase analysis using deep convolutional neural networks (DCNN) to create an automated technology that enabled us to detect and count saigas (Saiga tatarica) in satellite images with a resolution of 0.3–0.5 m/pixel (Eros-B 2012; 2013 and Beijing KA 2022 satellites). In the first phase, the satellite image is automatically divided into sections and checked for the presence or absence of clusters of objects (the “classification” phase). Then, during the second phase, only the fragments of the satellite image where at least one saiga was previously found are analyzed (the “detection” phase). The method was calibrated by training a neural network on the results of the preliminary processing of archival satellite images from 2012 and 2013, carried out manually by zoological experts. When we tested the DCNN work with a “confidence threshold” of 0.3, we identified 1284 saigas on the entire model satellite image, while a zoological expert manually identified 1412 saigas. For practical use and to assess the effectiveness of this method, we counted saigas on a 2022 image covering two adjacent specially protected natural areas (PAs) located in the Republic of Kalmykia and the Astrakhan region (Russian Federation). The results are presented with different “thresholds of confidence.”

摘要 我们利用深度卷积神经网络(DCNN)进行了两阶段分析,创建了一种自动化技术,使我们能够在分辨率为 0.3-0.5 m/pixel 的卫星图像(Eros-B 2012;2013 和 Beijing KA 2022 卫星)中检测和计数 "箭猪"(Saiga tatarica)。在第一阶段,卫星图像被自动分割成若干部分,并检查是否存在物体群("分类 "阶段)。然后,在第二阶段,只分析之前至少发现过一个赛加的卫星图像片段("检测 "阶段)。动物学专家对 2012 年和 2013 年的档案卫星图像进行了初步处理,并根据处理结果对神经网络进行了训练,从而对该方法进行了校准。当我们以 0.3 的 "置信度阈值 "对 DCNN 的工作进行测试时,我们在整个模型卫星图像上识别出了 1284 个红鼠,而动物学专家手动识别出了 1412 个红鼠。为了实际使用和评估该方法的有效性,我们在一幅 2022 年的图像上对红鼠进行了计数,该图像覆盖了位于卡尔梅克共和国和阿斯特拉罕州(俄罗斯联邦)的两个相邻的特别保护自然区(PA)。结果以不同的 "置信阈值 "呈现。
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引用次数: 0
Leukocyte Composition of the Organs of the Immune System of Coregonus migratorius Infected with Dibothriocephalus dendriticus 洄游鱼感染树枝状二棘鲷后免疫系统器官的白细胞组成
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024607432
O. E. Mazur, I. A. Kutyrev, L. V. Tolochko

Abstract

For the first time, an analysis of leukocyte changes in the organs of the immune system (pronephros, mesonephros, and spleen) of the Baikal omul Coregonus migratorius (Georgi, 1775) (Salmoniformes: Coregonidae) infected with Dibothriocephalus dendriticus (Nitsch, 1824) (syn. Diphyllobothrium dendriticum) (Cestoda: Diphyllobothriidea) is presented in natural habitat conditions. In the pronephros of infected fish, the number of poorly differentiated neutrophils (myelocytes and metamyelocytes) was significantly higher than in uninfected fish, which indicated inflammatory processes. D. dendriticus triggered the immunoregulatory processes in the body of infected fish, as evidenced by the decrease in the total number of lymphocytes and prolymphocytes (B-lymphocytes) in the pronephros and the increase in prolymphocytes in the spleen. The other effector elements (cells of the monocyte–macrophage lineage, basophils, and eosinophils) were barely involved in antiparasitic defense.

摘要首次分析了贝加尔湖鲻鱼Coregonus migratorius (Georgi, 1775) (Salmoniformes: Coregonidae)感染Dibothriocephalus dendriticus (Nitsch, 1824) (syn. Diphyllobothrium dendriticum) (Cestoda: Diphyllobothriidea) 后免疫系统器官(前肾、中肾和脾脏)中白细胞的变化。Dibhyllobothrium dendriticum)(绦虫纲:Diphyllobothriidea)的自然栖息环境。在受感染鱼类的前肾中,分化不良的中性粒细胞(髓质细胞和偏髓质细胞)数量明显高于未感染鱼类,这表明存在炎症过程。树突状枝孢菌触发了感染鱼体内的免疫调节过程,表现为前肾淋巴细胞和前淋巴细胞(B 淋巴细胞)总数的减少以及脾脏中前淋巴细胞的增加。其他效应因子(单核-巨噬细胞系细胞、嗜碱性粒细胞和嗜酸性粒细胞)几乎不参与抗寄生虫防御。
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引用次数: 0
Heavy Metal-Resistant PGPR Strains of Pseudomonas sp. Stimulating the Growth of Alfalfa under Cadmium Stress 在镉胁迫下促进紫花苜蓿生长的抗重金属假单胞菌 PGPR 菌株
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024607444
O. V. Chubukova, L. R. Khakimova, R. T. Matnyazov, Z. R. Vershinina

Abstract

Three bacteria strains of Pseudomonas sp. resistant to heavy metals were isolated from chemically contaminated soil. An analysis of the nucleotide sequences of the 16S rRNA and rpoD genes identified the Pseudomonas sp. 17 НМ strain as Pseudomonas capeferrum, and the strains of Pseudomonas sp. 65 НМ and 67 НМ were most closely related to the type strains of Pseudomonas silesiensis and Pseudomonas umsongensis, respectively. It was shown that the strains of Pseudomonas sp. 17 НМ, 65 НМ, and 67 НМ were characterized by different levels of resistance to heavy metals, with the maximum tolerable concentration (MTC) of zinc being 1 mМ for all strains, that of cadmium, 1, 1.5, and 1 mМ; of lead, 5, 5, and 4 mМ; and of nickel, 7, 9, and 7 mМ, respectively. All Pseudomonas strains can form biofilms and have the properties of PGPR bacteria. Treatment of alfalfa seeds (Medicago sativa L.) with the strains of Pseudomonas sp. 17 НМ, 65 НМ, and 67 НМ under cadmium stress increased the dry weight of alfalfa seedlings up to 40% and the content of chlorophyll a and b in the leaves by 25–33% relative to the control.

摘要 从受化学污染的土壤中分离出三株对重金属有抗性的假单胞菌。通过分析 16S rRNA 和 rpoD 基因的核苷酸序列,确定 17 Н М 假单胞菌株为 Capeferrum 假单胞菌,65 Н М 假单胞菌株和 67 Н М 假单胞菌株分别与 Silesiensis 假单胞菌和 umsongensis 假单胞菌的模式菌株关系最为密切。研究表明,17 НМ、65 НМ和 67 НМ假单胞菌的菌株对重金属的抗性程度不同,所有菌株对锌的最大耐受浓度(MTC)均为 1 毫摩尔,对镉的最大耐受浓度(MTC)分别为 1、1.5 和 1 毫摩尔。镉的最大耐受浓度分别为 1、1.5 和 1 毫微米;铅的最大耐受浓度分别为 5、5 和 4 毫微米;镍的最大耐受浓度分别为 7、9 和 7 毫微米。所有假单胞菌菌株都能形成生物膜,并具有 PGPR 细菌的特性。在镉胁迫下,用 17 НМ、65 НМ和 67 НМ假单胞菌处理紫花苜蓿(Medicago sativa L.)种子,紫花苜蓿幼苗的干重比对照增加了 40%,叶片中叶绿素 a 和 b 的含量增加了 25-33%。
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引用次数: 0
Dynamics of Food Passing through the Digestive Tract in the Nocturnal Rodent Meriones crassus as a Response to the Rhythm of Feeding Activity 夜间啮齿类动物 Meriones crassus 消化道中食物通过的动态变化是对进食活动节律的反应
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024608206
E. I. Naumova, G. K. Zharova, T. Yu. Chistova

Abstract

The dependence of the food passing through the digestive tract (DT) on feeding activity in the nocturnal rodent Meriones crassus was studied. Two groups of gerbils were housed in the laboratory under artificial lighting at a photoperiod of 12 : 12 L : D for 36 h. The groups were named “day” (L : D = 20 : 16) and “night” (L : D = 12 : 24) according to the predominance light or dark time during the experiment. The mean retention time of markers in the stomach in these groups was 20 and 30 h, respectively. The kinetics of the contents changed depending on the specific time of consumption of the markers and the saturation level of the rodents with food. During the daylight hours, sequential evacuation of markers entering the DT begins from the stomach after two hours, and at night, during a period of higher feeding activity, part of the food located in the fornix of the stomach and in the cecum stays here for a longer time. In the “day” group, by the end of the experiment, 84% of the markers were removed from the DT, and in the “night” group, about 55%.

摘要 研究了通过消化道(DT)的食物对夜间啮齿动物沙鼠摄食活动的依赖性。两组沙鼠被饲养在实验室中,在光周期为 12 : 12 L : D 的人工光照下生活了 36 小时。根据实验过程中主要的光照或黑暗时间,这两组沙鼠被命名为 "白天"(L : D = 20 : 16)和 "夜间"(L : D = 12 : 24)。这些组的标记物在胃中的平均滞留时间分别为 20 和 30 小时。胃内容物的动力学变化取决于啮齿动物摄入标记物的具体时间和食物饱和度。在白天,进入 DT 的标记物在两小时后开始从胃中依次排出,而在夜间,在进食活动较多的时期,位于胃穹窿和盲肠中的部分食物会在此停留较长时间。实验结束时,"白天 "组有 84% 的标记物从 DT 中清除,而 "夜间 "组则有 55% 左右。
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引用次数: 0
The Content of Endogenous Hormones in Explants and Calluses of Lavandula angustifolia Mill. at the Initial Stages of an In Vitro Culture 试管培养初期薰衣草外植体和胼胝体中内源性激素的含量
IF 0.5 4区 生物学 Q4 BIOLOGY Pub Date : 2024-09-10 DOI: 10.1134/s1062359024607924
N. N. Kruglova, I. R. Galin, N. A. Yegorova

Abstract

The content of endogenous hormones (auxin IAA, cytokinines, ABA) in explants of various types (segments of the leaf, bud, and stem), primary calluses induced from them, and morphogenic and nonmorphogenic calluses at the initial stages of in vitro culture by the immunoassay method was studied for the first time for Lavandula angustifolia Mill. The maximum value of the hormone levels in explants such as segments of a bud was shown. An increase in the content of hormones in primary calluses was revealed in comparison with similar characteristics in all types of explants. The higher level of the active form of cytokinin (trans-zeatin) and ABA, as well as the lower level of the inactive form of cytokinin (zeatin-nucleotide) and auxin IAA, were identified in the morphogenic callus compared with the nonmorphogenic one. It is suggested that the content of endogenous hormones in explants and calluses of L. angustifolia is due to their histological status. A conclusion is made about the unified histophysiological mechanisms of callusogenesis and morphogenesis in vitro in the studied plant.

摘要 通过免疫测定法首次研究了Lavandula angustifolia Mill.的各种类型的外植体(叶片、芽和茎)、由外植体诱导的初生胼胝体以及离体培养初期的形态发生胼胝体和非形态发生胼胝体中内源激素(辅助素IAA、细胞分裂素、ABA)的含量。结果显示,芽片等外植体中的激素含量达到了最高值。与各类外植体的类似特征相比,原生胼胝体中的激素含量有所增加。与非形态发生茧相比,形态发生茧中细胞分裂素的活性形式(反式玉米素)和 ABA 的含量较高,而细胞分裂素的非活性形式(玉米素-核苷酸)和辅助素 IAA 的含量较低。研究表明,L. angustifolia 外植体和胼胝体中内源激素的含量与它们的组织学状态有关。研究得出的结论是,所研究植物的离体胼胝发生和形态发生的组织生理学机制是统一的。
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引用次数: 0
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