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The Role of SUMO1 Modification of SOX9 in Cartilage Development Stimulated by Zinc Ions in Mice. 锌离子刺激小鼠软骨发育过程中 SOX9 的 SUMO1 修饰作用
IF 1.6 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-01 Epub Date: 2025-02-04 DOI: 10.1080/15476278.2025.2460269
Na Xue, Jing Zhao, Jing Yin, Liang Liu, Zhong Yang, Shuchao Zhai, Xiyun Bian, Xiang Gao

Zinc ions play a pivotal role in facilitating the development of cartilage in mice. Nevertheless, the precise underlying mechanism remains elusive. Our investigation was centered on elucidating the impact of zinc deficiency on cartilage maturation by modulating SUMO1 and UBC9 at both the protein and mRNA levels. We administered a regimen inducing zinc deficiency to gravid mice from E0.5 until euthanasia. Subsequently, we subjected the embryos to scrutiny employing HE, Safranin O staining and IHC. Primary chondrocytes were isolated from fetal mouse femoral condyles and utilized for Western blot analysis to discern the expression profiles of SUMO1, SUMO2/3, UBC9, SOX9, MMP13, Collagen II, RUNX2, and aggrecan. Furthermore, ATDC5 murine chondrocytes were subjected to treatment with ZnCl2, followed by RT-PCR assessment to scrutinize the expression levels of MMP13, Collagen II, RUNX2, and aggrecan. Additionally, we conducted Co-IP assays on ZnCl2-treated ATDC5 cells to explore the interaction between SOX9 and SUMO1. Our investigation unveiled that zinc deficiency led to a reduction in cartilage development, as evidenced by the HE results in fetal murine femur. Moreover, diminished expression levels of SUMO1 and UBC9 were observed in the IHC and Western blot results. Furthermore, Western blot and Co-IP assays revealed an augmented interaction between SOX9 and SUMO1, which was potentiated by ZnCl2 treatment. Significantly, mutations at the SUMOylation site of SOX9 resulted in alterations in the expression patterns of crucial chondrogenesis factors. This research underscores how zinc ions promote cartilage development through the modification of SOX9 by SUMO1.

锌离子在促进小鼠软骨发育方面发挥着关键作用。然而,其确切的内在机制仍然难以捉摸。我们的研究重点是通过在蛋白和 mRNA 水平上调节 SUMO1 和 UBC9,来阐明缺锌对软骨成熟的影响。我们从E0.5开始对怀孕小鼠进行缺锌诱导,直至安乐死。随后,我们利用 HE、Safranin O 染色和 IHC 对胚胎进行了仔细检查。我们从胎儿小鼠股骨髁中分离出原代软骨细胞,并利用Western印迹分析鉴定了SUMO1、SUMO2/3、UBC9、SOX9、MMP13、胶原蛋白II、RUNX2和凝集素的表达谱。此外,用 ZnCl2 处理 ATDC5 小鼠软骨细胞,然后进行 RT-PCR 评估,以仔细检查 MMP13、胶原蛋白 II、RUNX2 和 aggrecan 的表达水平。此外,我们还对氯化锌处理过的ATDC5细胞进行了Co-IP检测,以探索SOX9和SUMO1之间的相互作用。我们的研究发现,缺锌会导致软骨发育不良,胎鼠股骨的 HE 结果就是证明。此外,在 IHC 和 Western 印迹结果中还观察到 SUMO1 和 UBC9 的表达水平降低。此外,Western印迹和Co-IP检测显示,SOX9和SUMO1之间的相互作用增强了,而ZnCl2处理又增强了这种作用。值得注意的是,SOX9的SUMO化位点突变会导致关键软骨生成因子表达模式的改变。这项研究强调了锌离子是如何通过SUMO1修饰SOX9来促进软骨发育的。
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引用次数: 0
Calcium Imaging in Vivo: How to Correctly Select and Apply Fiber Optic Photometric Indicators.
IF 1.6 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-01 Epub Date: 2025-04-05 DOI: 10.1080/15476278.2025.2489667
Lanxia Wu, Wenxuan Sun, Linjie Huang, Lin Sun, Jinhua Dou, Guohua Lu

Fiber-photometric is a novel optogenetic method for recording neural activity in vivo, which allows the use of calcium indicators to observe and study the relationship between neural activity and behavior in free-ranging animals. Calcium indicators also convert changes in calcium concentration in cells or tissues into recordable fluorescent signals, which can then be observed using the system of fiber-photometric. To date, there is a paucity of relevant literature on the proper selection and application of fiber-photometric indicators. Therefore, this paper will detail how to correctly select and apply fiber-photometer indicators in four sections: the basic principle of optical fiber photometry, the selection of calcium fluorescent probes and viral vector systems, and the measurement of specific expression of fluorescent proteins in specific tissues. Therefore, the correct use of suitable fiber optic recording indicators will greatly assist researchers in exploring the link between neuronal activity and neuropsychiatric disorders.

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引用次数: 0
Detection of cognitive load during computer-aided education using infrared sensors.
IF 3.1 3区 工程技术 Q2 NEUROSCIENCES Pub Date : 2025-12-01 Epub Date: 2025-04-04 DOI: 10.1007/s11571-025-10242-0
Subashis Karmakar, Tandra Pal, Chiranjib Koley

Technology integration in modern education has transformed traditional teaching-learning methods, but maintaining student attentiveness during computer-aided activities remains challenging. Neuroimaging advancements provide valuable insights into cognitive processes. This study measures cognitive load during computer-aided education. We have collected functional near-infrared spectroscopy (fNIRS) brain signals while subjects perform mental tasks and rest. Three datasets have been considered to evaluate the performance of the proposed model. The first two datasets are open-access, and we prepare the third dataset by collecting fNIRS brain signals from 14 healthy subjects. Two feature extraction techniques are proposed: manual and automatic based on wavelet scattering transform (WST). A one dimensional convolutional neural network (1D CNN) is also proposed to automatically extract features through feature engineering and classification. For comparison, four machine learning classifiers, linear discriminant analysis (LDA), Naive Bayes (NB), k-nearest neighbors (KNN) and support vector machine (SVM), are also considered. Classification performance is evaluated using accuracy, precision, recall and F1-score across all datasets. Computational cost, i.e., the CPU time and memory utilization for extracting the features and testing the classifiers, is also evaluated. The results suggest that when considering four classifiers across three datasets and comparing among the manual and the WST-based feature extraction methods, the average performance of 1D CNN is superior in terms of classification accuracy (1.16 times higher), precision (1.10 times higher), recall (1.10 times higher) and F1-score (1.09 times higher). However, the CPU time and memory utilization for 1D CNN are significantly higher, 10.09 and 14.70 times, respectively. In comparison to four state-of-the-art deep learning models, the proposed 1D CNN also shows best classification accuracy (92.99%). The analysis of the results shows that identifying cognitive load, SVM with Gaussian kernel function on WST based methods, provides satisfactory classification performance with significantly less CPU time and memory utilization.

现代教育中的技术整合改变了传统的教学方法,但在计算机辅助活动中保持学生的注意力仍然具有挑战性。神经影像学的进步为认知过程提供了宝贵的见解。本研究测量计算机辅助教学过程中的认知负荷。我们收集了受试者执行心理任务和休息时的功能性近红外光谱(fNIRS)脑信号。为评估所建模型的性能,我们考虑了三个数据集。前两个数据集是开放获取的,我们通过收集 14 名健康受试者的 fNIRS 脑信号来准备第三个数据集。我们提出了两种特征提取技术:手动提取和基于小波散射变换(WST)的自动提取。此外,还提出了一种一维卷积神经网络(1D CNN),通过特征工程和分类自动提取特征。为了进行比较,还考虑了四种机器学习分类器,即线性判别分析(LDA)、奈夫贝叶斯(NB)、k-近邻(KNN)和支持向量机(SVM)。使用所有数据集的准确度、精确度、召回率和 F1 分数来评估分类性能。此外,还评估了计算成本,即提取特征和测试分类器所需的 CPU 时间和内存利用率。结果表明,考虑到三个数据集的四个分类器,并比较人工和基于 WST 的特征提取方法,1D CNN 的平均性能在分类准确率(高 1.16 倍)、精确度(高 1.10 倍)、召回率(高 1.10 倍)和 F1 分数(高 1.09 倍)方面更胜一筹。不过,一维 CNN 的 CPU 时间和内存利用率明显更高,分别为 10.09 倍和 14.70 倍。与四种最先进的深度学习模型相比,所提出的一维 CNN 还显示出最佳的分类准确率(92.99%)。结果分析表明,在基于 WST 的方法上识别认知负荷、具有高斯核函数的 SVM,能提供令人满意的分类性能,CPU 时间和内存利用率也明显降低。
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引用次数: 0
Two genetically modified insect-resistant maize events reduced fumonisin pollution under the stress of Lepidoptera in China.
IF 4.5 2区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-01 Epub Date: 2025-04-06 DOI: 10.1080/21645698.2025.2488882
Lin Zhao, Jing Lan, Xiaolei Zhang, Yun Zhang, Cui Huang, Wenqiong Ma, Yingqiu Du, Haiming Zhao, Baohai Liu

China is the second-largest maize producer and consumer globally. During maize production, Fusarium spp. often gets infected, and mycotoxins like fumonisin contaminate it. Fumonisin has become the most widely polluted mycotoxin type in China. Planting genetically - modified maize is an economical and effective approach to reducing fumonisin pollution in products. This study aimed to evaluate the effectiveness of two transgenic events from China, Bt-Cry1Ab-Ma CM8101 and Bt-Cry1Ab, Cry2Ab, G10evo Ruifeng 8, in reducing fumonisin pollution in maize under the stress of natural and Lepidopteran pests (Ostrinia furnacalis, Mythimna separate, Helicoverpa armigera) in two Chinese sites from 2018-2019. The results showed that under the stress of Lepidoptera insects (O. furnacalis and H. armigera), the total amount of fumonisin in Bt maize decreased significantly. Maize with two insect-resistant transgenic events reduced fumonisin by over 70%. In years with serious fumonisin pollution, the effects of CM8101 and Ruifeng 8 on reducing pollution were more significant. Bt maize can provide area-wide pest management and thus contribute to a progressive phase-down of chemical pesticide use. Genetically-modified insecticidal crops can ensure food and nutrition security, contribute to the sustainable intensification of China's agriculture, and reduce the environmental footprint of food systems.

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引用次数: 0
Monitoring nap deprivation-induced fatigue using fNIRS and deep learning.
IF 3.1 3区 工程技术 Q2 NEUROSCIENCES Pub Date : 2025-12-01 Epub Date: 2025-01-23 DOI: 10.1007/s11571-025-10219-z
Pei Ma, Chenyang Pan, Huijuan Shen, Wushuang Shen, Hui Chen, Xuedian Zhang, Shuyu Xu, Jingzhou Xu, Tong Su

Fatigue-induced incidents in transportation, aerospace, military, and other areas have been on the rise, posing a threat to human life and safety. The determination of fatigue states holds significant importance, especially through reliable and conveniently available physiological indicators. Here, a portable custom-built fNIRS system was used to monitor the fatigue state caused by nap deprivation. fNIRS signals in ten channels at the prefrontal cortex were collected, changes in blood oxygen concentration were analyzed, followed by a deep learning model to classify fatigue states. For the high-dimensionality and multi-channel characteristics of the fNIRS signal data, a novel 1D revised CNN-ResNet network was proposed based on the double-layer channel attenuation residual block. The results showed a 97.78% accuracy in fatigue state classification, significantly superior than several conventional methods. Furthermore, a fatigue-arousal experiment was designed to explore the feasibility of forced arousal of fatigued subjects through exercise stimulation. The fNIRS results showed a significant increase in brain activity with the conduction of exercise. The proposed method serves as a reliable tool for the evaluation of fatigue states, potentially reducing fatigue-induced harms and risks.

在交通、航空航天、军事和其他领域,由疲劳引发的事故呈上升趋势,对人类的生命和安全构成威胁。疲劳状态的判定具有重要意义,尤其是通过可靠、便捷的生理指标。本文使用定制的便携式 fNIRS 系统来监测午睡剥夺导致的疲劳状态。该系统收集了前额叶皮层十个通道的 fNIRS 信号,分析了血氧浓度的变化,然后使用深度学习模型对疲劳状态进行分类。针对 fNIRS 信号数据的高维和多通道特点,提出了一种基于双层通道衰减残差块的新型一维修正 CNN-ResNet 网络。结果显示,疲劳状态分类的准确率为 97.78%,明显优于几种传统方法。此外,还设计了疲劳唤醒实验,以探索通过运动刺激强制唤醒疲劳受试者的可行性。fNIRS 结果显示,大脑活动随着运动的传导而显著增加。所提出的方法是评估疲劳状态的可靠工具,有可能减少疲劳引起的危害和风险。
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引用次数: 0
A novel adaptive lightweight multimodal efficient feature inference network ALME-FIN for EEG emotion recognition. 一种新的自适应轻量级多模态高效特征推理网络ALME-FIN。
IF 3.1 3区 工程技术 Q2 NEUROSCIENCES Pub Date : 2025-12-01 Epub Date: 2025-01-13 DOI: 10.1007/s11571-024-10186-x
Xiaoliang Guo, Shuo Zhai

Enhancing the accuracy of emotion recognition models through multimodal learning is a common approach. However, challenges such as insufficient modal feature learning in multimodal inference and scarcity of sample data continue to pose obstacles that need to be overcome. Therefore, we propose a novel adaptive lightweight multimodal efficient feature inference network (ALME-FIN). We introduce a time-domain lightweight adaptive network (TDLAN) and a two-dimensional dynamic focusing network (TDDFN) for multimodal feature learning. The TDLAN incorporates the denoising process as an integral part of network training, achieving adaptive denoising for each sample through the continuous optimization of the trainable filtering threshold. Simultaneously, it incorporates an interactive convolutional sampling module, enabling lightweight multi-scale feature extraction in the time domain. TDDFN effectively extracts core image features while filtering out redundancies. During the training process, the Multi-network dynamic gradient adjustment framework (MDGAF) dynamically monitors the feature learning efficacy across different modalities. It timely adjusts the training gradients of networks to allocate additional optimization time for under-optimized modalities, thereby maximizing the utilization of multimodal feature information. Moreover, the introduction of a Multi-class relationship interaction module prior to the classifier aids the model in clearly understanding the relationships among different category samples. This approach enables the model to achieve relatively accurate emotion recognition even in scenarios of limited sample availability. Compared to existing multimodal learning techniques, ALME-FIN exhibits a more efficient multimodal feature inference method that can achieve satisfactory emotional recognition performance even with a limited number of samples.

通过多模态学习来提高情绪识别模型的准确性是一种常用的方法。然而,诸如多模态推理中模态特征学习不足和样本数据稀缺等挑战仍然是需要克服的障碍。因此,我们提出了一种新的自适应轻量级多模态高效特征推理网络(ALME-FIN)。我们引入了时域轻量级自适应网络(TDLAN)和二维动态聚焦网络(TDDFN)用于多模态特征学习。TDLAN将去噪过程作为网络训练的一个组成部分,通过对可训练滤波阈值的不断优化,实现对每个样本的自适应去噪。同时,它结合了一个交互式卷积采样模块,在时域上实现了轻量级的多尺度特征提取。TDDFN有效地提取核心图像特征,同时滤除冗余。在训练过程中,多网络动态梯度调整框架(MDGAF)动态监测不同模式下的特征学习效果。及时调整网络的训练梯度,为未优化的模态分配额外的优化时间,从而最大限度地利用多模态特征信息。此外,在分类器之前引入多类关系交互模块,有助于模型清晰地理解不同类别样本之间的关系。这种方法使模型即使在样本有限的情况下也能实现相对准确的情绪识别。与现有的多模态学习技术相比,ALME-FIN展示了一种更高效的多模态特征推理方法,即使在有限的样本数量下也能获得令人满意的情绪识别性能。
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引用次数: 0
Cross-subject mental workload recognition using bi-classifier domain adversarial learning. 基于双分类器领域对抗学习的跨学科心理工作量识别。
IF 3.1 3区 工程技术 Q2 NEUROSCIENCES Pub Date : 2025-12-01 Epub Date: 2025-01-09 DOI: 10.1007/s11571-024-10215-9
Yueying Zhou, Pengpai Wang, Peiliang Gong, Peng Wan, Xuyun Wen, Daoqiang Zhang

To deploy Electroencephalogram (EEG) based Mental Workload Recognition (MWR) systems in the real world, it is crucial to develop general models that can be applied across subjects. Previous studies have utilized domain adaptation to mitigate inter-subject discrepancies in EEG data distributions. However, they have focused on reducing global domain discrepancy, while neglecting local workload-categorical domain divergence. This degrades the workload-discriminating ability of subject-invariant features. To deal with this problem, we propose a novel joint category-wise and domain-wise alignment Domain Adaptation (cdaDA) algorithm, using bi-classifier learning and domain discriminative adversarial learning. The bi-classifier learning approach is adopted to address the similarities and differences between categories, helping to align EEG data within the same mental workload categories. Additionally, the domain discriminative adversarial learning technique is adopted to consider global domain information by minimizing global domain discrepancy. By integrating both local category information and global domain information, the cdaDA model performs a coarse-to-fine alignment and achieves promising cross-subject MWR results.

为了在现实世界中部署基于脑电图(EEG)的精神负荷识别(MWR)系统,开发可跨学科应用的通用模型至关重要。以往的研究利用领域自适应来缓解脑电数据分布的主体间差异。然而,它们关注的是减少全局域差异,而忽略了局部工作负载-分类域差异。这降低了主题不变特征的工作负载区分能力。为了解决这一问题,我们提出了一种新的联合类别智能和领域智能对齐领域自适应(cdaDA)算法,该算法使用双分类器学习和领域判别对抗学习。采用双分类器学习方法来解决类别之间的相似性和差异性,有助于在相同的脑力工作类别中对齐脑电图数据。此外,采用域判别对抗学习技术,考虑全局域信息,使全局域差异最小化。通过整合局部类别信息和全局领域信息,cdaDA模型进行了从粗到精的对齐,并获得了令人满意的跨学科MWR结果。
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引用次数: 0
Regulatory mechanism of inhibitory interneurons with time-delay on epileptic seizures under sinusoidal sensory stimulation.
IF 3.1 3区 工程技术 Q2 NEUROSCIENCES Pub Date : 2025-12-01 Epub Date: 2025-02-05 DOI: 10.1007/s11571-025-10227-z
Zhihui Wang, Xindan Wei, Lixia Duan

Epilepsy is a neurological disorder in which complex electrophysiological processes are closely linked to inherent nonlinear kinetic properties. This study investigates the effects of sinusoidal sensory stimulation bias and time-delay on the dynamics of epileptic seizures within a corticothalamic neural network model. The results indicate that an increase in sensory stimulation bias can prematurely terminate seizures, and high-frequency stimulation can induce a phenomenon of frequency resonance. Meanwhile, discharge states transitions are associated with the emergence of bifurcation points. Time-delay exerts a significant regulatory influence on pathways with delay embedding (I2-PY), whereas its impact on pathways without delay embedding (I1-I1 and thalamic relay nucleus (TC)-I2) is negligible. Under sinusoidal sensory stimulation, the responses of three pathways (I1-I1, I1-PY, and I2-PY) associated with inhibitory interneurons reveal that the inhibitory properties of interneurons can suppress seizures; however, an excessively strong inhibitory effect may also precipitate seizures and facilitate state transitions. These findings contribute to a deeper understanding of seizure dynamics and may guide future research in the transmission and evolution of seizures.

癫痫是一种神经系统疾病,其中复杂的电生理过程与固有的非线性动力学特性密切相关。本研究探讨了正弦感觉刺激偏差和时间延迟对皮质-丘脑神经网络模型中癫痫发作动态的影响。结果表明,感觉刺激偏差的增加会提前终止癫痫发作,高频刺激会诱发频率共振现象。同时,放电状态的转换与分叉点的出现有关。时间延迟对有延迟嵌入的通路(I2-PY)有显著的调节作用,而对无延迟嵌入的通路(I1-I1 和丘脑中继核(TC)-I2)的影响则微乎其微。在正弦波感觉刺激下,与抑制性中间神经元相关的三条通路(I1-I1、I1-PY 和 I2-PY)的反应显示,中间神经元的抑制特性可以抑制癫痫发作;然而,过强的抑制作用也可能促使癫痫发作并促进状态转换。这些发现有助于加深对癫痫发作动态的理解,并可指导今后对癫痫发作的传播和演变的研究。
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引用次数: 0
In vivo toxicity of chitosan-based nanoparticles: a systematic review.
IF 4.5 3区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-01 Epub Date: 2025-02-09 DOI: 10.1080/21691401.2025.2462328
Shela Salsabila, Miski Aghnia Khairinisa, Nasrul Wathoni, Irna Sufiawati, Wan Ezumi Mohd Fuad, Nur Kusaira Khairul Ikram, Muchtaridi Muchtaridi

Chitosan nanoparticles have been extensively utilised as polymeric drug carriers in nanoparticles formulations due to their potential to enhance drug delivery, efficacy, and safety. Numerous toxicity studies have been previously conducted to assess the safety profile of chitosan-based nanoparticles. These toxicity studies employed various methodologies, including test animals, interventions, and different routes of administration. This review aims to summarise research on the safety profile of chitosan-based nanoparticles in drug delivery, with a focus on general toxicity tests to determine LD50 and NOAEL values. It can serve as a repository and reference for chitosan-based nanoparticles, facilitating future research and further development of drugs delivery system using chitosan nanoparticles. Publications from 2014 to 2024 were obtained from PubMed, Scopus, Google Scholar, and ScienceDirect, in accordance with the inclusion and exclusion criteria.The ARRIVE 2.0 guidelines were employed to evaluate the quality and risk-of-bias in the in vivo toxicity studies. The results demonstrated favourable toxicity profiles, often exhibiting reduced toxicity compared to free drugs or substances. Acute toxicity studies consistently reported high LD50 values, frequently exceeding 5000 mg/kg body weight, while subacute studies typically revealed no significant adverse effects. Various routes of administration varied, including oral, intravenous, intraperitoneal, inhalation, and topical, each demonstrating promising safety profiles.

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引用次数: 0
Reciprocal causation relationship between rumination thinking and sleep quality: a resting-state fMRI study.
IF 3.1 3区 工程技术 Q2 NEUROSCIENCES Pub Date : 2025-12-01 Epub Date: 2025-02-20 DOI: 10.1007/s11571-025-10223-3
Shiyan Yang, Xu Lei

Rumination thinking is a type of negative repetitive thinking, a tendency to constantly focus on the causes, consequences and other aspects of negative events, which has implications for a variety of psychiatric disorders. Previous studies have confirmed a strong association between rumination thinking and poor sleep or insomnia, but the direction of causality between the two is not entirely clear. This study examined the relationship between rumination thinking and sleep quality using a longitudinal approach and resting-state functional MRI data. Participants were 373 university students (males: n = 84, 18.67 ± 0.76 years old) who completed questionnaires at two time points (T1 and T2) and had resting-state MRI data collected. The results of the cross-lagged model analysis revealed a bidirectional causal relationship between rumination thinking and sleep quality. Additionally, the functional connectivity (FC) of the precuneus and lingual gyrus was found to be negatively correlated with rumination thinking and sleep quality. Furthermore, mediation analysis showed that rumination thinking at T1 fully mediated the relationship between FC of the precuneus-lingual and sleep quality at T2. These findings suggest that rumination thinking and sleep quality are causally related in a bidirectional manner and that the FC of the precuneus and lingual gyrus may serve as the neural basis for rumination thinking to predict sleep quality. Overall, this study provides new insights for enhancing sleep quality and promoting overall health.

Supplementary information: The online version contains supplementary material available at 10.1007/s11571-025-10223-3.

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引用次数: 0
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